RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 SLAIN2Q9P270 581 aa11.37□□□□□ -0.59
ABCA8-202ENST00000428549 RPS6KL1Q9Y6S9 549 aa11.37□□□□□ -0.59
ABCA8-202ENST00000428549 ATAD2Q6PL18 1390 aa11.36□□□□□ -0.59
ABCA8-202ENST00000428549 RBM47A0AV96 593 aaKnown RBP11.36□□□□□ -0.59
ABCA8-202ENST00000428549 PPFIA4O75335 1185 aa11.36□□□□□ -0.59
ABCA8-202ENST00000428549 CALRP27797 417 aaKnown RBP11.36□□□□□ -0.59
ABCA8-202ENST00000428549 ZNF662Q6ZS27 426 aa11.36□□□□□ -0.59
ABCA8-202ENST00000428549 MIER1Q8N108 512 aa11.36□□□□□ -0.59
ABCA8-202ENST00000428549 SDR16C5Q8N3Y7 309 aa11.36□□□□□ -0.59
ABCA8-202ENST00000428549 EVI5LQ96CN4 794 aa11.36□□□□□ -0.59
ABCA8-202ENST00000428549 KIAA1522Q9P206 1035 aaPredicted RBP11.36□□□□□ -0.59
ABCA8-202ENST00000428549 ADGRL3Q9HAR2 1447 aa11.36□□□□□ -0.59
ABCA8-202ENST00000428549 MINK1Q8N4C8 1332 aaPredicted RBP11.36□□□□□ -0.59
ABCA8-202ENST00000428549 DCCP43146 1447 aa11.35□□□□□ -0.59
ABCA8-202ENST00000428549 PEX14O75381 377 aa11.35□□□□□ -0.59
ABCA8-202ENST00000428549 SAFB2Q14151 953 aaKnown RBP eCLIP11.35□□□□□ -0.59
ABCA8-202ENST00000428549 SMC5Q8IY18 1101 aa11.35□□□□□ -0.59
ABCA8-202ENST00000428549 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.35□□□□□ -0.59
ABCA8-202ENST00000428549 CCER2I3L3R5 266 aa11.34□□□□□ -0.59
ABCA8-202ENST00000428549 TCF3P15923 654 aa11.34□□□□□ -0.59
ABCA8-202ENST00000428549 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.34□□□□□ -0.59
ABCA8-202ENST00000428549 ARID4AP29374 1257 aaPredicted RBP11.33□□□□□ -0.6
ABCA8-202ENST00000428549 MAGEC2Q9UBF1 373 aaPredicted RBP11.33□□□□□ -0.6
ABCA8-202ENST00000428549 KTN1Q86UP2 1357 aaKnown RBP11.33□□□□□ -0.6
ABCA8-202ENST00000428549 PER1O15534 1290 aaPredicted RBP11.32□□□□□ -0.6
ABCA8-202ENST00000428549 MAP4K4O95819 1239 aaPredicted RBP11.32□□□□□ -0.6
ABCA8-202ENST00000428549 SRPK2P78362 688 aaKnown RBP11.32□□□□□ -0.6
ABCA8-202ENST00000428549 C8orf37Q96NL8 207 aa11.32□□□□□ -0.6
ABCA8-202ENST00000428549 PANK3Q9H999 370 aa11.32□□□□□ -0.6
ABCA8-202ENST00000428549 WASLO00401 505 aaPredicted RBP11.31□□□□□ -0.6
ABCA8-202ENST00000428549 FOSBP53539 338 aa11.31□□□□□ -0.6
ABCA8-202ENST00000428549 CCDC181Q5TID7 509 aa11.31□□□□□ -0.6
ABCA8-202ENST00000428549 GIMAP6Q6P9H5 292 aa11.31□□□□□ -0.6
ABCA8-202ENST00000428549 UBXN4Q92575 508 aa11.31□□□□□ -0.6
ABCA8-202ENST00000428549 CDK19Q9BWU1 502 aa11.31□□□□□ -0.6
ABCA8-202ENST00000428549 NBPF20Q3BBV1 942 aa11.31□□□□□ -0.6
ABCA8-202ENST00000428549 SND1Q7KZF4 910 aaKnown RBP eCLIP11.31□□□□□ -0.6
ABCA8-202ENST00000428549 PRKRIP1Q9H875 184 aaPredicted RBP11.31□□□□□ -0.6
ABCA8-202ENST00000428549 CABP2Q9NPB3 220 aa11.31□□□□□ -0.6
ABCA8-202ENST00000428549 ANKRD36BQ8N2N9 1353 aa11.31□□□□□ -0.6
ABCA8-202ENST00000428549 NPC1L1Q9UHC9 1359 aa11.31□□□□□ -0.6
ABCA8-202ENST00000428549 NALCNQ8IZF0 1738 aa11.3□□□□□ -0.6
ABCA8-202ENST00000428549 CCDC96Q2M329 555 aa11.3□□□□□ -0.6
ABCA8-202ENST00000428549 ZFYVE27Q5T4F4 411 aa11.3□□□□□ -0.6
ABCA8-202ENST00000428549 WDR78Q5VTH9 848 aa11.3□□□□□ -0.6
ABCA8-202ENST00000428549 CEP120Q8N960 986 aa11.3□□□□□ -0.6
ABCA8-202ENST00000428549 MRRFQ96E11 262 aaKnown RBP11.3□□□□□ -0.6
ABCA8-202ENST00000428549 FAM117AQ9C073 453 aa11.3□□□□□ -0.6
ABCA8-202ENST00000428549 USP32Q8NFA0 1604 aa11.3□□□□□ -0.6
ABCA8-202ENST00000428549 CDC42BPGQ6DT37 1551 aa11.29□□□□□ -0.6
ABCA8-202ENST00000428549 ATP7BP35670 1465 aa11.29□□□□□ -0.6
ABCA8-202ENST00000428549 CREB3O43889 395 aa11.29□□□□□ -0.6
ABCA8-202ENST00000428549 HSPA1LP34931 641 aa11.29□□□□□ -0.6
ABCA8-202ENST00000428549 MST1RQ04912 1400 aa11.29□□□□□ -0.6
ABCA8-202ENST00000428549 NRDCO43847 1150 aa11.28□□□□□ -0.6
ABCA8-202ENST00000428549 LIG1P18858 919 aa11.28□□□□□ -0.6
ABCA8-202ENST00000428549 BRINP3Q76B58 766 aa11.28□□□□□ -0.6
ABCA8-202ENST00000428549 KNSTRNQ9Y448 316 aa11.28□□□□□ -0.6
ABCA8-202ENST00000428549 TOPAZ1Q8N9V7 1692 aa11.28□□□□□ -0.6
ABCA8-202ENST00000428549 EXOC5O00471 708 aa11.27□□□□□ -0.6
ABCA8-202ENST00000428549 FNBP4Q8N3X1 1017 aaPredicted RBP11.27□□□□□ -0.6
ABCA8-202ENST00000428549 TMC1Q8TDI8 760 aa11.27□□□□□ -0.6
ABCA8-202ENST00000428549 SLC12A5Q9H2X9 1139 aa11.27□□□□□ -0.6
ABCA8-202ENST00000428549 ANKARQ7Z5J8 1434 aa11.27□□□□□ -0.6
ABCA8-202ENST00000428549 C1orf167Q5SNV9 1468 aa11.27□□□□□ -0.6
ABCA8-202ENST00000428549 PARD3Q8TEW0 1356 aa11.27□□□□□ -0.61
ABCA8-202ENST00000428549 ITSN1Q15811 1721 aa11.27□□□□□ -0.61
ABCA8-202ENST00000428549 FMN2Q9NZ56 1722 aa11.27□□□□□ -0.61
ABCA8-202ENST00000428549 CLEC4GQ6UXB4 293 aa11.27□□□□□ -0.61
ABCA8-202ENST00000428549 ANP32BQ92688 251 aaKnown RBP11.27□□□□□ -0.61
ABCA8-202ENST00000428549 NSD3Q9BZ95 1437 aa11.26□□□□□ -0.61
ABCA8-202ENST00000428549 NUTM2FA1L443 756 aa11.26□□□□□ -0.61
ABCA8-202ENST00000428549 SH3BP5O60239 455 aa11.26□□□□□ -0.61
ABCA8-202ENST00000428549 ESCO1Q5FWF5 840 aa11.26□□□□□ -0.61
ABCA8-202ENST00000428549 TRIM44Q96DX7 344 aaPredicted RBP11.26□□□□□ -0.61
ABCA8-202ENST00000428549 ORAI2Q96SN7 254 aa11.26□□□□□ -0.61
ABCA8-202ENST00000428549 PPP1R1BQ9UD71 204 aaPredicted RBP11.26□□□□□ -0.61
ABCA8-202ENST00000428549 SH3BP1Q9Y3L3 701 aa11.26□□□□□ -0.61
ABCA8-202ENST00000428549 CCDC61Q9Y6R9 512 aa11.26□□□□□ -0.61
ABCA8-202ENST00000428549 CD163L1Q9NR16 1453 aa11.26□□□□□ -0.61
ABCA8-202ENST00000428549 ROBO1Q9Y6N7 1651 aa11.26□□□□□ -0.61
ABCA8-202ENST00000428549 A0A1W2PP64 1363 aa11.26□□□□□ -0.61
ABCA8-202ENST00000428549 PPIP5K1Q6PFW1 1433 aa11.25□□□□□ -0.61
ABCA8-202ENST00000428549 CACTIN-AS1Q8N1I8 211 aa11.25□□□□□ -0.61
ABCA8-202ENST00000428549 NUDT16Q96DE0 195 aaKnown RBP11.25□□□□□ -0.61
ABCA8-202ENST00000428549 METTL14Q9HCE5 456 aaKnown RBP11.25□□□□□ -0.61
ABCA8-202ENST00000428549 PNMA2Q9UL42 364 aa11.25□□□□□ -0.61
ABCA8-202ENST00000428549 NSD2O96028 1365 aa11.25□□□□□ -0.61
ABCA8-202ENST00000428549 HDGFL2Q7Z4V5 671 aaPredicted RBP11.24□□□□□ -0.61
ABCA8-202ENST00000428549 CDCA7Q9BWT1 371 aaPredicted RBP11.24□□□□□ -0.61
ABCA8-202ENST00000428549 CARD14Q9BXL6 1004 aa11.24□□□□□ -0.61
ABCA8-202ENST00000428549 HDAC5Q9UQL6 1122 aa11.24□□□□□ -0.61
ABCA8-202ENST00000428549 PRR36Q9H6K5 1346 aa11.24□□□□□ -0.61
ABCA8-202ENST00000428549 CPSF1Q10570 1443 aaKnown RBP11.24□□□□□ -0.61
ABCA8-202ENST00000428549 EIF3JO75822 258 aaKnown RBP11.24□□□□□ -0.61
ABCA8-202ENST00000428549 PDE4DQ08499 809 aa11.24□□□□□ -0.61
ABCA8-202ENST00000428549 MAMSTRQ6ZN01 415 aa11.24□□□□□ -0.61
ABCA8-202ENST00000428549 MAF1Q9H063 256 aa11.24□□□□□ -0.61
ABCA8-202ENST00000428549 PLSCR2Q9NRY7 297 aa11.24□□□□□ -0.61
ABCA8-202ENST00000428549 MYBBP1AQ9BQG0 1328 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms