RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 NBPF6Q5VWK0 638 aa21.35■■□□□ 1.01
CTDSP1-202ENST00000428361 NBPF4Q96M43 638 aa21.35■■□□□ 1.01
CTDSP1-202ENST00000428361 CASZ1Q86V15 1759 aa21.35■■□□□ 1.01
CTDSP1-202ENST00000428361 MEGF6O75095 1541 aa21.34■■□□□ 1.01
CTDSP1-202ENST00000428361 SYTL4Q96C24 671 aaPredicted RBP21.34■■□□□ 1.01
CTDSP1-202ENST00000428361 POLR3GLQ9BT43 218 aa21.34■■□□□ 1.01
CTDSP1-202ENST00000428361 HSP90AB2PQ58FF8 381 aa21.33■■□□□ 1.01
CTDSP1-202ENST00000428361 RGPD2P0DJD1 1756 aa21.33■■□□□ 1
CTDSP1-202ENST00000428361 PCDH11XQ9BZA7 1347 aa21.32■■□□□ 1
CTDSP1-202ENST00000428361 PCDH11YQ9BZA8 1340 aa21.32■■□□□ 1
CTDSP1-202ENST00000428361 MTFR1LQ9H019 292 aa21.31■■□□□ 1
CTDSP1-202ENST00000428361 PRIM1P49642 420 aaKnown RBP21.3■■□□□ 1
CTDSP1-202ENST00000428361 PAPPAQ13219 1627 aa21.29■■□□□ 1
CTDSP1-202ENST00000428361 DOT1LQ8TEK3 1739 aa21.29■■□□□ 1
CTDSP1-202ENST00000428361 PPM1GO15355 546 aaPredicted RBP21.29■■□□□ 1
CTDSP1-202ENST00000428361 ZBTB7AO95365 584 aa21.29■■□□□ 1
CTDSP1-202ENST00000428361 USHBP1Q8N6Y0 703 aa21.29■■□□□ 1
CTDSP1-202ENST00000428361 EMILIN1Q9Y6C2 1016 aa21.29■■□□□ 1
CTDSP1-202ENST00000428361 HSPA5P11021 654 aaKnown RBP21.28■■□□□ 1
CTDSP1-202ENST00000428361 SHANK3Q9BYB0 1731 aa21.28■■□□□ 1
CTDSP1-202ENST00000428361 WASHC2AQ641Q2 1341 aa21.28■■□□□ 1
CTDSP1-202ENST00000428361 ANKRD26Q9UPS8 1709 aa21.27■■□□□ 1
CTDSP1-202ENST00000428361 NSD2O96028 1365 aa21.27■■□□□ 1
CTDSP1-202ENST00000428361 SLC16A10Q8TF71 515 aa21.25■□□□□ 0.99
CTDSP1-202ENST00000428361 PDGFDQ9GZP0 370 aaPredicted RBP21.24■□□□□ 0.99
CTDSP1-202ENST00000428361 LRRC4BQ9NT99 713 aa21.24■□□□□ 0.99
CTDSP1-202ENST00000428361 SPG7Q9UQ90 795 aa21.24■□□□□ 0.99
CTDSP1-202ENST00000428361 ATF5Q9Y2D1 282 aaPredicted RBP21.24■□□□□ 0.99
CTDSP1-202ENST00000428361 PLEKHG2Q9H7P9 1386 aa21.23■□□□□ 0.99
CTDSP1-202ENST00000428361 NCAPD2Q15021 1401 aa21.23■□□□□ 0.99
CTDSP1-202ENST00000428361 PTGER2P43116 358 aa21.23■□□□□ 0.99
CTDSP1-202ENST00000428361 MAP2P11137 1827 aaKnown RBP21.22■□□□□ 0.99
CTDSP1-202ENST00000428361 QSER1Q2KHR3 1735 aa21.22■□□□□ 0.99
CTDSP1-202ENST00000428361 ZNF827Q17R98 1081 aa21.22■□□□□ 0.99
CTDSP1-202ENST00000428361 AKT1S1Q96B36 256 aa21.22■□□□□ 0.99
CTDSP1-202ENST00000428361 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.22■□□□□ 0.99
CTDSP1-202ENST00000428361 TFCP2L1Q9NZI6 479 aa21.22■□□□□ 0.99
CTDSP1-202ENST00000428361 POLKQ9UBT6 870 aa21.22■□□□□ 0.99
CTDSP1-202ENST00000428361 CCNL1Q9UK58 526 aaPredicted RBP21.22■□□□□ 0.99
CTDSP1-202ENST00000428361 LY75O60449 1722 aa21.21■□□□□ 0.99
CTDSP1-202ENST00000428361 PANK3Q9H999 370 aa21.21■□□□□ 0.99
CTDSP1-202ENST00000428361 SMARCC1Q92922 1105 aaPredicted RBP21.2■□□□□ 0.98
CTDSP1-202ENST00000428361 PKD1L3Q7Z443 1732 aa21.2■□□□□ 0.98
CTDSP1-202ENST00000428361 POLD1P28340 1107 aa21.19■□□□□ 0.98
CTDSP1-202ENST00000428361 ARXQ96QS3 562 aa21.18■□□□□ 0.98
CTDSP1-202ENST00000428361 EYA1Q99502 592 aa21.18■□□□□ 0.98
CTDSP1-202ENST00000428361 CYP27B1O15528 508 aa21.17■□□□□ 0.98
CTDSP1-202ENST00000428361 TNNT2P45379 298 aaPredicted RBP21.17■□□□□ 0.98
CTDSP1-202ENST00000428361 SGIP1Q9BQI5 828 aa21.17■□□□□ 0.98
CTDSP1-202ENST00000428361 KNSTRNQ9Y448 316 aa21.17■□□□□ 0.98
CTDSP1-202ENST00000428361 NKX1-1Q15270 411 aaPredicted RBP21.16■□□□□ 0.98
CTDSP1-202ENST00000428361 MPRIPQ6WCQ1 1025 aa21.16■□□□□ 0.98
CTDSP1-202ENST00000428361 PALLDQ8WX93 1383 aa21.15■□□□□ 0.98
CTDSP1-202ENST00000428361 MAP3K5Q99683 1374 aa21.15■□□□□ 0.98
CTDSP1-202ENST00000428361 PNPLA7Q6ZV29 1317 aa21.15■□□□□ 0.98
CTDSP1-202ENST00000428361 MORC1Q86VD1 984 aa21.15■□□□□ 0.98
CTDSP1-202ENST00000428361 IFNL2Q8IZJ0 200 aa21.15■□□□□ 0.98
CTDSP1-202ENST00000428361 FHDC1Q9C0D6 1143 aaPredicted RBP21.15■□□□□ 0.98
CTDSP1-202ENST00000428361 EIF4A2Q14240 407 aaKnown RBP21.14■□□□□ 0.97
CTDSP1-202ENST00000428361 FLAD1Q8NFF5 587 aa21.14■□□□□ 0.97
CTDSP1-202ENST00000428361 SYT17Q9BSW7 474 aa21.14■□□□□ 0.97
CTDSP1-202ENST00000428361 YY1P25490 414 aa21.13■□□□□ 0.97
CTDSP1-202ENST00000428361 IGSF1Q8N6C5 1336 aa21.11■□□□□ 0.97
CTDSP1-202ENST00000428361 HSP90AB1P08238 724 aaKnown RBP21.11■□□□□ 0.97
CTDSP1-202ENST00000428361 KCNQ4P56696 695 aa21.11■□□□□ 0.97
CTDSP1-202ENST00000428361 TMOD3Q9NYL9 352 aa21.11■□□□□ 0.97
CTDSP1-202ENST00000428361 MSH5O43196 834 aa21.1■□□□□ 0.97
CTDSP1-202ENST00000428361 C5P01031 1676 aa21.09■□□□□ 0.97
CTDSP1-202ENST00000428361 ITGB4P16144 1822 aa21.09■□□□□ 0.97
CTDSP1-202ENST00000428361 PHKG2P15735 406 aa21.09■□□□□ 0.97
CTDSP1-202ENST00000428361 AMOTQ4VCS5 1084 aa21.08■□□□□ 0.97
CTDSP1-202ENST00000428361 PLEKHO1Q53GL0 409 aaPredicted RBP21.08■□□□□ 0.97
CTDSP1-202ENST00000428361 TOGARAM1Q9Y4F4 1720 aa21.08■□□□□ 0.97
CTDSP1-202ENST00000428361 TUBGCP6Q96RT7 1819 aa21.08■□□□□ 0.96
CTDSP1-202ENST00000428361 PIGBQ92521 554 aa21.07■□□□□ 0.96
CTDSP1-202ENST00000428361 AK7Q96M32 723 aa21.07■□□□□ 0.96
CTDSP1-202ENST00000428361 COL24A1Q17RW2 1714 aa21.07■□□□□ 0.96
CTDSP1-202ENST00000428361 KIF7Q2M1P5 1343 aa21.05■□□□□ 0.96
CTDSP1-202ENST00000428361 ERVV-2B6SEH9 535 aa21.04■□□□□ 0.96
CTDSP1-202ENST00000428361 COL23A1Q86Y22 540 aaPredicted RBP21.04■□□□□ 0.96
CTDSP1-202ENST00000428361 DCAF5Q96JK2 942 aa21.04■□□□□ 0.96
CTDSP1-202ENST00000428361 TAF1LQ8IZX4 1826 aa21.04■□□□□ 0.96
CTDSP1-202ENST00000428361 LOC102724428A0A0B4J2F2 783 aa21.03■□□□□ 0.96
CTDSP1-202ENST00000428361 SIK1P57059 783 aa21.03■□□□□ 0.96
CTDSP1-202ENST00000428361 KLHL34Q8N239 644 aa21.03■□□□□ 0.96
CTDSP1-202ENST00000428361 C4BP0C0L5 1744 aa21.02■□□□□ 0.96
CTDSP1-202ENST00000428361 AMER1Q5JTC6 1135 aaPredicted RBP21.02■□□□□ 0.96
CTDSP1-202ENST00000428361 C1orf141Q5JVX7 400 aa21.02■□□□□ 0.96
CTDSP1-202ENST00000428361 SSFA2P28290 1259 aa21■□□□□ 0.95
CTDSP1-202ENST00000428361 ZNF530Q6P9A1 599 aaPredicted RBP21■□□□□ 0.95
CTDSP1-202ENST00000428361 GPR162Q16538 588 aa20.99■□□□□ 0.95
CTDSP1-202ENST00000428361 KDRP35968 1356 aa20.98■□□□□ 0.95
CTDSP1-202ENST00000428361 ATP6V1AP38606 617 aa20.98■□□□□ 0.95
CTDSP1-202ENST00000428361 SULT6B1Q6IMI4 303 aa20.98■□□□□ 0.95
CTDSP1-202ENST00000428361 ASAP1Q9ULH1 1129 aa20.98■□□□□ 0.95
CTDSP1-202ENST00000428361 CABP4P57796 275 aa20.97■□□□□ 0.95
CTDSP1-202ENST00000428361 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.96■□□□□ 0.95
CTDSP1-202ENST00000428361 IL13P35225 146 aa20.96■□□□□ 0.95
CTDSP1-202ENST00000428361 MTHFSP49914 203 aa20.96■□□□□ 0.95
CTDSP1-202ENST00000428361 ATG3Q9NT62 314 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms