RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.87■■□□□ 1.414e-17■□□□□ 10.2
CTDSP1-202ENST00000428361 AQRO60306 1485 aaKnown RBP eCLIP27.73■■■□□ 2.036e-12■■■■■ 82.1
CTDSP1-202ENST00000428361 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.65□□□□□ -0.064e-11■■■■□ 21.9
CTDSP1-202ENST00000428361 GTF2F1P35269 517 aaKnown RBP eCLIP17.28■□□□□ 0.368e-11■■■□□ 18.7
CTDSP1-202ENST00000428361 BUD13Q9BRD0 619 aaKnown RBP eCLIP18■□□□□ 0.471e-10■■□□□ 14.1
CTDSP1-202ENST00000428361 EFTUD2Q15029 972 aaKnown RBP eCLIP14.48□□□□□ -0.096e-10■■■■■ 27.5
CTDSP1-202ENST00000428361 DDX3XO00571 662 aaKnown RBP eCLIP15.58■□□□□ 0.081e-9■□□□□ 10.9
CTDSP1-202ENST00000428361 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.29■■□□□ 1.643e-9■■■■■ 48.7
CTDSP1-202ENST00000428361 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.08□□□□□ -0.166e-9■■■■■ 464.9
CTDSP1-202ENST00000428361 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.75□□□□□ -0.377e-9■□□□□ 10.4
CTDSP1-202ENST00000428361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.91■■□□□ 1.428e-9■■■■■ 56.5
CTDSP1-202ENST00000428361 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.04■□□□□ 0.161e-8■■■■■ 33.1
CTDSP1-202ENST00000428361 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.09■□□□□ 0.013e-8■■■■■ 70.6
CTDSP1-202ENST00000428361 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.35□□□□□ -0.275e-8■■■■□ 25.6
CTDSP1-202ENST00000428361 PPIGQ13427 754 aaKnown RBP eCLIP18.09■□□□□ 0.495e-8■■■□□ 16.4
CTDSP1-202ENST00000428361 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.94■□□□□ 0.147e-8■□□□□ 10.4
CTDSP1-202ENST00000428361 SF3B4Q15427 424 aaKnown RBP eCLIP14.26□□□□□ -0.139e-8■■□□□ 12.6
CTDSP1-202ENST00000428361 NKRFO15226 690 aaKnown RBP eCLIP18.09■□□□□ 0.491e-7■■□□□ 11.7
CTDSP1-202ENST00000428361 NCBP2P52298 156 aaKnown RBP eCLIP14.07□□□□□ -0.162e-7■■□□□ 13.2
CTDSP1-202ENST00000428361 CDC40O60508 579 aaKnown RBP eCLIP14.37□□□□□ -0.113e-7■■■■□ 25.6
CTDSP1-202ENST00000428361 SMNDC1O75940 238 aaKnown RBP eCLIP13.96□□□□□ -0.173e-7■■■■■ 27.2
CTDSP1-202ENST00000428361 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.52■□□□□ 0.085e-7■■■□□ 16
CTDSP1-202ENST00000428361 PRPF4O43172 522 aaKnown RBP eCLIP14.83□□□□□ -0.047e-7■■■□□ 17
CTDSP1-202ENST00000428361 SF3A3Q12874 501 aaKnown RBP eCLIP13.19□□□□□ -0.37e-7■■■□□ 16.8
CTDSP1-202ENST00000428361 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.5□□□□□ -0.097e-7■■□□□ 12.7
CTDSP1-202ENST00000428361 FUSP35637 526 aaKnown RBP eCLIP10.35□□□□□ -0.759e-7■□□□□ 9.5
CTDSP1-202ENST00000428361 PCBP2Q15366 365 aaKnown RBP eCLIP14.35□□□□□ -0.111e-6■■■□□ 18.1
CTDSP1-202ENST00000428361 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.98■□□□□ 0.311e-6■■□□□ 13.3
CTDSP1-202ENST00000428361 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.62■□□□□ 0.571e-6■■□□□ 12.9
CTDSP1-202ENST00000428361 YBX3P16989 372 aaKnown RBP eCLIP20.78■□□□□ 0.921e-6■□□□□ 10.2
CTDSP1-202ENST00000428361 ZC3H11AO75152 810 aaKnown RBP eCLIP17.23■□□□□ 0.352e-6■■■■■ 37.4
CTDSP1-202ENST00000428361 EWSR1Q01844 656 aaKnown RBP eCLIP11.34□□□□□ -0.592e-6■■□□□ 13.2
CTDSP1-202ENST00000428361 NONOQ15233 471 aaKnown RBP eCLIP17.45■□□□□ 0.382e-6■■■■■ 28
CTDSP1-202ENST00000428361 RBM5P52756 815 aaKnown RBP eCLIP19.38■□□□□ 0.692e-6■■□□□ 12.2
CTDSP1-202ENST00000428361 FKBP4Q02790 459 aaKnown RBP eCLIP20.18■□□□□ 0.822e-6■■■■□ 25.6
CTDSP1-202ENST00000428361 UPF1Q92900 1129 aaKnown RBP eCLIP22.46■■□□□ 1.192e-6■□□□□ 9.4
CTDSP1-202ENST00000428361 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.16■□□□□ 0.662e-6■□□□□ 8
CTDSP1-202ENST00000428361 SF3B1O75533 1304 aaKnown RBP eCLIP17.07■□□□□ 0.323e-6■■■■■ 90.4
CTDSP1-202ENST00000428361 HNRNPKP61978 463 aaKnown RBP eCLIP15.73■□□□□ 0.114e-6■□□□□ 8.8
CTDSP1-202ENST00000428361 RBFOX2O43251 390 aaKnown RBP eCLIP11.78□□□□□ -0.525e-6■■■□□ 19.2
CTDSP1-202ENST00000428361 TROVE2P10155 538 aaKnown RBP eCLIP13.39□□□□□ -0.275e-6■□□□□ 9.7
CTDSP1-202ENST00000428361 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.93■□□□□ 0.625e-6■□□□□ 10.3
CTDSP1-202ENST00000428361 DDX6P26196 483 aaKnown RBP eCLIP16.65■□□□□ 0.265e-6■■■■■ 34.8
CTDSP1-202ENST00000428361 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.03□□□□□ -0.166e-6■■■■■ 38.3
CTDSP1-202ENST00000428361 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.74□□□□□ -0.217e-6■■□□□ 11.8
CTDSP1-202ENST00000428361 XRCC6P12956 609 aaKnown RBP eCLIP17.23■□□□□ 0.358e-6■□□□□ 10.2
Retrieved 46 of 46 RNA–protein pairs in 25.4 ms