RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 LMOD3Q0VAK6 560 aa15.79■□□□□ 0.12
RFC4-206ENST00000427785 TOM1L2Q6ZVM7 507 aa15.79■□□□□ 0.12
RFC4-206ENST00000427785 GAS2L2Q8NHY3 880 aa15.79■□□□□ 0.12
RFC4-206ENST00000427785 BTG4Q9NY30 223 aa15.79■□□□□ 0.12
RFC4-206ENST00000427785 E9PSI1 815 aa15.78■□□□□ 0.12
RFC4-206ENST00000427785 DCTN1Q14203 1278 aa15.78■□□□□ 0.12
RFC4-206ENST00000427785 DUSP27Q5VZP5 1158 aa15.78■□□□□ 0.12
RFC4-206ENST00000427785 LARP1Q6PKG0 1096 aaKnown RBP15.78■□□□□ 0.12
RFC4-206ENST00000427785 WDR63Q8IWG1 891 aa15.78■□□□□ 0.12
RFC4-206ENST00000427785 SLIT2O94813 1529 aa15.78■□□□□ 0.12
RFC4-206ENST00000427785 OVOS2A0A0G2JMS6 1433 aa15.77■□□□□ 0.12
RFC4-206ENST00000427785 KDM3BQ7LBC6 1761 aa15.77■□□□□ 0.12
RFC4-206ENST00000427785 EVA1CP58658 441 aa15.76■□□□□ 0.11
RFC4-206ENST00000427785 RAPGEF4Q8WZA2 1011 aa15.76■□□□□ 0.11
RFC4-206ENST00000427785 SPATA31A6Q5VVP1 1343 aa15.75■□□□□ 0.11
RFC4-206ENST00000427785 FANCIQ9NVI1 1328 aa15.75■□□□□ 0.11
RFC4-206ENST00000427785 TOGARAM1Q9Y4F4 1720 aa15.75■□□□□ 0.11
RFC4-206ENST00000427785 TATP17735 454 aaPredicted RBP15.75■□□□□ 0.11
RFC4-206ENST00000427785 ZNF530Q6P9A1 599 aaPredicted RBP15.75■□□□□ 0.11
RFC4-206ENST00000427785 MCM10Q7L590 875 aa15.75■□□□□ 0.11
RFC4-206ENST00000427785 IL16Q14005 1332 aa15.74■□□□□ 0.11
RFC4-206ENST00000427785 PLEKHO1Q53GL0 409 aaPredicted RBP15.74■□□□□ 0.11
RFC4-206ENST00000427785 TRMT2AQ8IZ69 625 aaKnown RBP15.74■□□□□ 0.11
RFC4-206ENST00000427785 TSR2Q969E8 191 aaKnown RBP15.74■□□□□ 0.11
RFC4-206ENST00000427785 CARD10Q9BWT7 1032 aa15.74■□□□□ 0.11
RFC4-206ENST00000427785 MYH16Q9H6N6 1097 aa15.73■□□□□ 0.11
RFC4-206ENST00000427785 LAS1LQ9Y4W2 734 aaKnown RBP15.73■□□□□ 0.11
RFC4-206ENST00000427785 PLEKHG2Q9H7P9 1386 aa15.73■□□□□ 0.11
RFC4-206ENST00000427785 DISP2A7MBM2 1401 aa15.72■□□□□ 0.11
RFC4-206ENST00000427785 GNAT3A8MTJ3 354 aa15.72■□□□□ 0.11
RFC4-206ENST00000427785 RTF1Q92541 710 aaKnown RBP15.72■□□□□ 0.11
RFC4-206ENST00000427785 USP35Q9P2H5 1018 aa15.72■□□□□ 0.11
RFC4-206ENST00000427785 CALD1Q05682 793 aaKnown RBP15.71■□□□□ 0.11
RFC4-206ENST00000427785 AMOTQ4VCS5 1084 aa15.71■□□□□ 0.11
RFC4-206ENST00000427785 C8orf37Q96NL8 207 aa15.71■□□□□ 0.11
RFC4-206ENST00000427785 SUPT16HQ9Y5B9 1047 aaKnown RBP15.71■□□□□ 0.11
RFC4-206ENST00000427785 ITGB4P16144 1822 aa15.71■□□□□ 0.1
RFC4-206ENST00000427785 KDM6AO15550 1401 aaPredicted RBP15.7■□□□□ 0.1
RFC4-206ENST00000427785 C1orf141Q5JVX7 400 aa15.7■□□□□ 0.1
RFC4-206ENST00000427785 IFT57Q9NWB7 429 aa15.7■□□□□ 0.1
RFC4-206ENST00000427785 RCAN3Q9UKA8 241 aa15.7■□□□□ 0.1
RFC4-206ENST00000427785 DOT1LQ8TEK3 1739 aa15.7■□□□□ 0.1
RFC4-206ENST00000427785 MRC1P22897 1456 aa15.7■□□□□ 0.1
RFC4-206ENST00000427785 KAT6BQ8WYB5 2073 aa15.69■□□□□ 0.1
RFC4-206ENST00000427785 IL2RBP14784 551 aa15.69■□□□□ 0.1
RFC4-206ENST00000427785 AKAP4Q5JQC9 854 aa15.69■□□□□ 0.1
RFC4-206ENST00000427785 BCL9LQ86UU0 1499 aa15.68■□□□□ 0.1
RFC4-206ENST00000427785 CEMIPQ8WUJ3 1361 aa15.68■□□□□ 0.1
RFC4-206ENST00000427785 HTATSF1O43719 755 aaKnown RBP15.68■□□□□ 0.1
RFC4-206ENST00000427785 GNAI1P63096 354 aa15.68■□□□□ 0.1
RFC4-206ENST00000427785 MEX3CQ5U5Q3 659 aaKnown RBP15.68■□□□□ 0.1
RFC4-206ENST00000427785 MBIPQ9NS73 344 aa15.68■□□□□ 0.1
RFC4-206ENST00000427785 SPG7Q9UQ90 795 aa15.68■□□□□ 0.1
RFC4-206ENST00000427785 TNS2Q63HR2 1409 aa15.68■□□□□ 0.1
RFC4-206ENST00000427785 ZNF853P0CG23 659 aa15.67■□□□□ 0.1
RFC4-206ENST00000427785 EXOSC9Q06265 439 aaKnown RBP15.67■□□□□ 0.1
RFC4-206ENST00000427785 IL17REQ8NFR9 667 aa15.67■□□□□ 0.1
RFC4-206ENST00000427785 PAPPAQ13219 1627 aa15.67■□□□□ 0.1
RFC4-206ENST00000427785 C5P01031 1676 aa15.67■□□□□ 0.1
RFC4-206ENST00000427785 GLI3P10071 1580 aa15.66■□□□□ 0.1
RFC4-206ENST00000427785 MPRIPQ6WCQ1 1025 aa15.66■□□□□ 0.1
RFC4-206ENST00000427785 NGLY1Q96IV0 654 aa15.66■□□□□ 0.1
RFC4-206ENST00000427785 CFAP44Q96MT7 982 aa15.66■□□□□ 0.1
RFC4-206ENST00000427785 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.66■□□□□ 0.1
RFC4-206ENST00000427785 GTF3C3Q9Y5Q9 886 aa15.66■□□□□ 0.1
RFC4-206ENST00000427785 THSD7AQ9UPZ6 1657 aa15.66■□□□□ 0.1
RFC4-206ENST00000427785 SPATA31A1Q5TZJ5 1347 aa15.66■□□□□ 0.1
RFC4-206ENST00000427785 PCDH11XQ9BZA7 1347 aa15.66■□□□□ 0.1
RFC4-206ENST00000427785 PCDH11YQ9BZA8 1340 aa15.66■□□□□ 0.1
RFC4-206ENST00000427785 CYP27B1O15528 508 aa15.65■□□□□ 0.1
RFC4-206ENST00000427785 RNMTO43148 476 aaKnown RBP15.65■□□□□ 0.1
RFC4-206ENST00000427785 PHKG2P15735 406 aa15.65■□□□□ 0.1
RFC4-206ENST00000427785 IRX6P78412 446 aaPredicted RBP15.65■□□□□ 0.1
RFC4-206ENST00000427785 LGR6Q9HBX8 967 aa15.65■□□□□ 0.1
RFC4-206ENST00000427785 CCDC9Q9Y3X0 531 aaKnown RBP15.65■□□□□ 0.1
RFC4-206ENST00000427785 SPATA31A5Q5VU36 1347 aa15.65■□□□□ 0.1
RFC4-206ENST00000427785 SPATA31A7Q8IWB4 1347 aa15.65■□□□□ 0.1
RFC4-206ENST00000427785 UNC5CLQ8IV45 518 aa15.64■□□□□ 0.09
RFC4-206ENST00000427785 ZCRB1Q8TBF4 217 aaKnown RBP15.64■□□□□ 0.09
RFC4-206ENST00000427785 UBR2Q8IWV8 1755 aa15.64■□□□□ 0.09
RFC4-206ENST00000427785 LAMB4A4D0S4 1761 aa15.63■□□□□ 0.09
RFC4-206ENST00000427785 NEFLP07196 543 aa15.63■□□□□ 0.09
RFC4-206ENST00000427785 RRP1P56182 461 aaKnown RBP15.63■□□□□ 0.09
RFC4-206ENST00000427785 IFNL2Q8IZJ0 200 aa15.63■□□□□ 0.09
RFC4-206ENST00000427785 MIS18AQ9NYP9 233 aa15.63■□□□□ 0.09
RFC4-206ENST00000427785 TSPYL4Q9UJ04 414 aa15.63■□□□□ 0.09
RFC4-206ENST00000427785 CACNA1FO60840 1977 aa15.63■□□□□ 0.09
RFC4-206ENST00000427785 RNF123Q5XPI4 1314 aa15.63■□□□□ 0.09
RFC4-206ENST00000427785 CHL1O00533 1208 aa15.62■□□□□ 0.09
RFC4-206ENST00000427785 AFF2P51816 1311 aa15.62■□□□□ 0.09
RFC4-206ENST00000427785 TEFQ10587 303 aa15.61■□□□□ 0.09
RFC4-206ENST00000427785 KRT24Q2M2I5 525 aa15.61■□□□□ 0.09
RFC4-206ENST00000427785 FNBP4Q8N3X1 1017 aaPredicted RBP15.61■□□□□ 0.09
RFC4-206ENST00000427785 BCL2L13Q9BXK5 485 aa15.61■□□□□ 0.09
RFC4-206ENST00000427785 USP21Q9UK80 565 aa15.61■□□□□ 0.09
RFC4-206ENST00000427785 VPS72Q15906 364 aa15.6■□□□□ 0.09
RFC4-206ENST00000427785 TSPYL6Q8N831 410 aa15.6■□□□□ 0.09
RFC4-206ENST00000427785 ATRNO75882 1429 aa15.6■□□□□ 0.09
RFC4-206ENST00000427785 BRWD3Q6RI45 1802 aa15.59■□□□□ 0.09
RFC4-206ENST00000427785 BCAR3O75815 825 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms