RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 SPATA31A3Q5VYP0 1347 aa34.16■■■■□ 3.06
SH3GL3-202ENST00000427482 CHL1O00533 1208 aa34.16■■■■□ 3.06
SH3GL3-202ENST00000427482 TSPYL6Q8N831 410 aa34.15■■■■□ 3.06
SH3GL3-202ENST00000427482 KIF16BQ96L93 1317 aa34.14■■■■□ 3.06
SH3GL3-202ENST00000427482 MS4A1P11836 297 aa34.14■■■■□ 3.06
SH3GL3-202ENST00000427482 BRPF1P55201 1214 aaPredicted RBP34.14■■■■□ 3.06
SH3GL3-202ENST00000427482 COL18A1P39060 1754 aa34.14■■■■□ 3.06
SH3GL3-202ENST00000427482 KDM2BQ8NHM5 1336 aa34.13■■■■□ 3.05
SH3GL3-202ENST00000427482 SLAIN2Q9P270 581 aa34.13■■■■□ 3.05
SH3GL3-202ENST00000427482 TWISTNBQ3B726 338 aaPredicted RBP34.12■■■■□ 3.05
SH3GL3-202ENST00000427482 MAP3K5Q99683 1374 aa34.11■■■■□ 3.05
SH3GL3-202ENST00000427482 C8orf58Q8NAV2 365 aa34.11■■■■□ 3.05
SH3GL3-202ENST00000427482 ANKRD24Q8TF21 1146 aa34.11■■■■□ 3.05
SH3GL3-202ENST00000427482 DZIP1LQ8IYY4 767 aaKnown RBP34.11■■■■□ 3.05
SH3GL3-202ENST00000427482 LRRC59Q96AG4 307 aaKnown RBP34.11■■■■□ 3.05
SH3GL3-202ENST00000427482 LMO7Q8WWI1 1683 aa34.1■■■■□ 3.05
SH3GL3-202ENST00000427482 GNAT3A8MTJ3 354 aa34.1■■■■□ 3.05
SH3GL3-202ENST00000427482 AAMPQ13685 434 aa34.1■■■■□ 3.05
SH3GL3-202ENST00000427482 CLUAP1Q96AJ1 413 aa34.1■■■■□ 3.05
SH3GL3-202ENST00000427482 NOB1Q9ULX3 412 aaKnown RBP34.1■■■■□ 3.05
SH3GL3-202ENST00000427482 AXIN2Q9Y2T1 843 aa34.1■■■■□ 3.05
SH3GL3-202ENST00000427482 ABCC6O95255 1503 aa34.1■■■■□ 3.05
SH3GL3-202ENST00000427482 TRIM27P14373 513 aa34.09■■■■□ 3.05
SH3GL3-202ENST00000427482 ATF7IPQ6VMQ6 1270 aa34.09■■■■□ 3.05
SH3GL3-202ENST00000427482 KIAA0232Q92628 1395 aa34.08■■■■□ 3.05
SH3GL3-202ENST00000427482 ZC3H6P61129 1189 aaKnown RBP34.08■■■■□ 3.05
SH3GL3-202ENST00000427482 CENPQQ7L2Z9 268 aaPredicted RBP34.08■■■■□ 3.05
SH3GL3-202ENST00000427482 IPO8O15397 1037 aaKnown RBP34.07■■■■□ 3.04
SH3GL3-202ENST00000427482 FTSJ3Q8IY81 847 aaKnown RBP34.07■■■■□ 3.04
SH3GL3-202ENST00000427482 ELL2O00472 640 aaPredicted RBP34.06■■■■□ 3.04
SH3GL3-202ENST00000427482 MVPQ14764 893 aaKnown RBP34.06■■■■□ 3.04
SH3GL3-202ENST00000427482 MRPL50Q8N5N7 158 aaKnown RBP34.06■■■■□ 3.04
SH3GL3-202ENST00000427482 NHSL1Q5SYE7 1610 aa34.06■■■■□ 3.04
SH3GL3-202ENST00000427482 SOS2Q07890 1332 aaPredicted RBP34.05■■■■□ 3.04
SH3GL3-202ENST00000427482 FAM208AQ9UK61 1670 aaKnown RBP34.04■■■■□ 3.04
SH3GL3-202ENST00000427482 ERBB3P21860 1342 aa34.04■■■■□ 3.04
SH3GL3-202ENST00000427482 CABLES1Q8TDN4 633 aa34.02■■■■□ 3.04
SH3GL3-202ENST00000427482 VIRMAQ69YN4 1812 aaKnown RBP34.01■■■■□ 3.04
SH3GL3-202ENST00000427482 CPDO75976 1380 aa34■■■■□ 3.03
SH3GL3-202ENST00000427482 HAP1P54257 671 aaPredicted RBP34■■■■□ 3.03
SH3GL3-202ENST00000427482 TSPYL4Q9UJ04 414 aa34■■■■□ 3.03
SH3GL3-202ENST00000427482 IL17REQ8NFR9 667 aa33.99■■■■□ 3.03
SH3GL3-202ENST00000427482 ABCA3Q99758 1704 aa33.99■■■■□ 3.03
SH3GL3-202ENST00000427482 ARHGAP45Q92619 1136 aa33.98■■■■□ 3.03
SH3GL3-202ENST00000427482 KRT24Q2M2I5 525 aa33.97■■■■□ 3.03
SH3GL3-202ENST00000427482 PLEKHO1Q53GL0 409 aaPredicted RBP33.96■■■■□ 3.03
SH3GL3-202ENST00000427482 MIS18AQ9NYP9 233 aa33.96■■■■□ 3.03
SH3GL3-202ENST00000427482 AMOTQ4VCS5 1084 aa33.95■■■■□ 3.03
SH3GL3-202ENST00000427482 CEMIPQ8WUJ3 1361 aa33.95■■■■□ 3.03
SH3GL3-202ENST00000427482 BABAM1Q9NWV8 329 aa33.94■■■■□ 3.02
SH3GL3-202ENST00000427482 DDX19BQ9UMR2 479 aa33.94■■■■□ 3.02
SH3GL3-202ENST00000427482 TMEM57Q8N5G2 664 aa33.93■■■■□ 3.02
SH3GL3-202ENST00000427482 RBM19Q9Y4C8 960 aaKnown RBP33.93■■■■□ 3.02
SH3GL3-202ENST00000427482 TCERG1O14776 1098 aaKnown RBP33.93■■■■□ 3.02
SH3GL3-202ENST00000427482 ITPRIPQ8IWB1 547 aa33.92■■■■□ 3.02
SH3GL3-202ENST00000427482 AKAP4Q5JQC9 854 aa33.91■■■■□ 3.02
SH3GL3-202ENST00000427482 ZNF530Q6P9A1 599 aaPredicted RBP33.91■■■■□ 3.02
SH3GL3-202ENST00000427482 IGHDP01880 384 aa33.9■■■■□ 3.02
SH3GL3-202ENST00000427482 TAF7Q15545 349 aaPredicted RBP33.9■■■■□ 3.02
SH3GL3-202ENST00000427482 KDM3BQ7LBC6 1761 aa33.89■■■■□ 3.02
SH3GL3-202ENST00000427482 PCDHB15Q9Y5E8 787 aa33.89■■■■□ 3.02
SH3GL3-202ENST00000427482 CHRNA2Q15822 529 aa33.88■■■■□ 3.01
SH3GL3-202ENST00000427482 ABCC4O15439 1325 aa33.87■■■■□ 3.01
SH3GL3-202ENST00000427482 OVOS2A0A0G2JMS6 1433 aa33.87■■■■□ 3.01
SH3GL3-202ENST00000427482 ADAMTS7Q9UKP4 1686 aa33.86■■■■□ 3.01
SH3GL3-202ENST00000427482 NLRP2Q9NX02 1062 aa33.86■■■■□ 3.01
SH3GL3-202ENST00000427482 LTBP4Q8N2S1 1624 aa33.85■■■■□ 3.01
SH3GL3-202ENST00000427482 API5Q9BZZ5 524 aaKnown RBP33.85■■■■□ 3.01
SH3GL3-202ENST00000427482 CACNA1FO60840 1977 aa33.84■■■■□ 3.01
SH3GL3-202ENST00000427482 C1orf141Q5JVX7 400 aa33.83■■■■□ 3.01
SH3GL3-202ENST00000427482 LGR6Q9HBX8 967 aa33.83■■■■□ 3.01
SH3GL3-202ENST00000427482 PLEKHG2Q9H7P9 1386 aa33.83■■■■□ 3.01
SH3GL3-202ENST00000427482 SIPA1L3O60292 1781 aaPredicted RBP33.82■■■■□ 3.01
SH3GL3-202ENST00000427482 SOS1Q07889 1333 aaPredicted RBP33.82■■■■□ 3
SH3GL3-202ENST00000427482 CSB-PGBD3P0DP91 1061 aa33.81■■■■□ 3
SH3GL3-202ENST00000427482 SKAP1Q86WV1 359 aa33.81■■■■□ 3
SH3GL3-202ENST00000427482 ROBO1Q9Y6N7 1651 aa33.81■■■■□ 3
SH3GL3-202ENST00000427482 RAPGEF4Q8WZA2 1011 aa33.81■■■■□ 3
SH3GL3-202ENST00000427482 ZBTB40Q9NUA8 1239 aa33.81■■■■□ 3
SH3GL3-202ENST00000427482 MEGF6O75095 1541 aa33.8■■■■□ 3
SH3GL3-202ENST00000427482 PKD1L3Q7Z443 1732 aa33.8■■■■□ 3
SH3GL3-202ENST00000427482 RGS12O14924 1447 aa33.79■■■■□ 3
SH3GL3-202ENST00000427482 PRDM11Q9NQV5 511 aa33.79■■■■□ 3
SH3GL3-202ENST00000427482 RNMTO43148 476 aaKnown RBP33.78■■■■□ 3
SH3GL3-202ENST00000427482 MPRIPQ6WCQ1 1025 aa33.78■■■■□ 3
SH3GL3-202ENST00000427482 SCN11AQ9UI33 1791 aa33.77■■■■□ 3
SH3GL3-202ENST00000427482 RWDD1Q9H446 243 aaPredicted RBP33.77■■■■□ 3
SH3GL3-202ENST00000427482 PTPRCP08575 1304 aa33.77■■■■□ 3
SH3GL3-202ENST00000427482 TATP17735 454 aaPredicted RBP33.76■■■■□ 3
SH3GL3-202ENST00000427482 TEFQ10587 303 aa33.75■■■□□ 2.99
SH3GL3-202ENST00000427482 CHMP4BQ9H444 224 aaKnown RBP33.75■■■□□ 2.99
SH3GL3-202ENST00000427482 AHDC1Q5TGY3 1603 aaPredicted RBP33.75■■■□□ 2.99
SH3GL3-202ENST00000427482 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.74■■■□□ 2.99
SH3GL3-202ENST00000427482 SLC4A2P04920 1241 aa33.74■■■□□ 2.99
SH3GL3-202ENST00000427482 COL5A2P05997 1499 aaPredicted RBP33.73■■■□□ 2.99
SH3GL3-202ENST00000427482 PARP4Q9UKK3 1724 aaKnown RBP33.72■■■□□ 2.99
SH3GL3-202ENST00000427482 ZBTB7BO15156 539 aaPredicted RBP33.72■■■□□ 2.99
SH3GL3-202ENST00000427482 HDAC1Q13547 482 aaPredicted RBP33.71■■■□□ 2.99
SH3GL3-202ENST00000427482 SPG7Q9UQ90 795 aa33.71■■■□□ 2.99
SH3GL3-202ENST00000427482 WDR17Q8IZU2 1322 aa33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms