RNA–Protein interactions for RNA: ENST00000426856.1

CRIM1-203, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-203ENST00000426856 FYB1O15117 783 aa21.35■■□□□ 1.01
CRIM1-203ENST00000426856 PRIM1P49642 420 aaKnown RBP21.35■■□□□ 1.01
CRIM1-203ENST00000426856 KCNQ4P56696 695 aa21.35■■□□□ 1.01
CRIM1-203ENST00000426856 SYTL4Q96C24 671 aaPredicted RBP21.35■■□□□ 1.01
CRIM1-203ENST00000426856 GGNBP2Q9H3C7 697 aa21.35■■□□□ 1.01
CRIM1-203ENST00000426856 SLC27A3Q5K4L6 730 aa21.34■■□□□ 1.01
CRIM1-203ENST00000426856 ARXQ96QS3 562 aa21.34■■□□□ 1.01
CRIM1-203ENST00000426856 KIF20BQ96Q89 1820 aa21.34■■□□□ 1.01
CRIM1-203ENST00000426856 TMF1P82094 1093 aa21.33■■□□□ 1.01
CRIM1-203ENST00000426856 NBPF6Q5VWK0 638 aa21.33■■□□□ 1.01
CRIM1-203ENST00000426856 ZCRB1Q8TBF4 217 aaKnown RBP21.33■■□□□ 1.01
CRIM1-203ENST00000426856 NBPF4Q96M43 638 aa21.33■■□□□ 1.01
CRIM1-203ENST00000426856 USHBP1Q8N6Y0 703 aa21.32■■□□□ 1
CRIM1-203ENST00000426856 MAP3K5Q99683 1374 aa21.32■■□□□ 1
CRIM1-203ENST00000426856 COL24A1Q17RW2 1714 aa21.32■■□□□ 1
CRIM1-203ENST00000426856 PNPLA7Q6ZV29 1317 aa21.31■■□□□ 1
CRIM1-203ENST00000426856 CHD4Q14839 1912 aa21.28■■□□□ 1
CRIM1-203ENST00000426856 TFCP2L1Q9NZI6 479 aa21.28■■□□□ 1
CRIM1-203ENST00000426856 SMG6Q86US8 1419 aaKnown RBP21.28■■□□□ 1
CRIM1-203ENST00000426856 GOLGB1Q14789 3259 aaKnown RBP21.27■■□□□ 1
CRIM1-203ENST00000426856 HSP90AB2PQ58FF8 381 aa21.27■■□□□ 1
CRIM1-203ENST00000426856 SLC16A10Q8TF71 515 aa21.27■■□□□ 1
CRIM1-203ENST00000426856 INSRP06213 1382 aa21.26■□□□□ 0.99
CRIM1-203ENST00000426856 ZNF784Q8NCA9 323 aaPredicted RBP21.26■□□□□ 0.99
CRIM1-203ENST00000426856 CGNL1Q0VF96 1302 aa21.26■□□□□ 0.99
CRIM1-203ENST00000426856 FLT4P35916 1363 aa21.25■□□□□ 0.99
CRIM1-203ENST00000426856 RAPGEF4Q8WZA2 1011 aa21.25■□□□□ 0.99
CRIM1-203ENST00000426856 CCNL1Q9UK58 526 aaPredicted RBP21.25■□□□□ 0.99
CRIM1-203ENST00000426856 TRIM26Q12899 539 aaPredicted RBP21.24■□□□□ 0.99
CRIM1-203ENST00000426856 CARD14Q9BXL6 1004 aa21.24■□□□□ 0.99
CRIM1-203ENST00000426856 KLHL34Q8N239 644 aa21.23■□□□□ 0.99
CRIM1-203ENST00000426856 NSD3Q9BZ95 1437 aa21.22■□□□□ 0.99
CRIM1-203ENST00000426856 TOGARAM1Q9Y4F4 1720 aa21.22■□□□□ 0.99
CRIM1-203ENST00000426856 TATP17735 454 aaPredicted RBP21.22■□□□□ 0.99
CRIM1-203ENST00000426856 POLD1P28340 1107 aa21.22■□□□□ 0.99
CRIM1-203ENST00000426856 CDCA8Q53HL2 280 aa21.22■□□□□ 0.99
CRIM1-203ENST00000426856 KIF24Q5T7B8 1368 aa21.22■□□□□ 0.99
CRIM1-203ENST00000426856 C5P01031 1676 aa21.21■□□□□ 0.99
CRIM1-203ENST00000426856 EMILIN1Q9Y6C2 1016 aa21.21■□□□□ 0.99
CRIM1-203ENST00000426856 PCDH11XQ9BZA7 1347 aa21.21■□□□□ 0.99
CRIM1-203ENST00000426856 PCDH11YQ9BZA8 1340 aa21.21■□□□□ 0.99
CRIM1-203ENST00000426856 PKD1L3Q7Z443 1732 aa21.2■□□□□ 0.98
CRIM1-203ENST00000426856 ANKRD26Q9UPS8 1709 aa21.2■□□□□ 0.98
CRIM1-203ENST00000426856 ITGB4P16144 1822 aa21.18■□□□□ 0.98
CRIM1-203ENST00000426856 TAF1LQ8IZX4 1826 aa21.18■□□□□ 0.98
CRIM1-203ENST00000426856 CYP27B1O15528 508 aa21.18■□□□□ 0.98
CRIM1-203ENST00000426856 GPR162Q16538 588 aa21.18■□□□□ 0.98
CRIM1-203ENST00000426856 COL23A1Q86Y22 540 aaPredicted RBP21.18■□□□□ 0.98
CRIM1-203ENST00000426856 NLGN2Q8NFZ4 835 aa21.18■□□□□ 0.98
CRIM1-203ENST00000426856 PALLDQ8WX93 1383 aa21.17■□□□□ 0.98
CRIM1-203ENST00000426856 NCAPD2Q15021 1401 aa21.17■□□□□ 0.98
CRIM1-203ENST00000426856 MSH5O43196 834 aa21.16■□□□□ 0.98
CRIM1-203ENST00000426856 MPRIPQ6WCQ1 1025 aa21.16■□□□□ 0.98
CRIM1-203ENST00000426856 MSL1Q68DK7 614 aa21.14■□□□□ 0.97
CRIM1-203ENST00000426856 PELP1Q8IZL8 1130 aaKnown RBP21.14■□□□□ 0.97
CRIM1-203ENST00000426856 MAP2P11137 1827 aaKnown RBP21.13■□□□□ 0.97
CRIM1-203ENST00000426856 PPM1GO15355 546 aaPredicted RBP21.13■□□□□ 0.97
CRIM1-203ENST00000426856 C4BP0C0L5 1744 aa21.12■□□□□ 0.97
CRIM1-203ENST00000426856 WASHC2AQ641Q2 1341 aa21.1■□□□□ 0.97
CRIM1-203ENST00000426856 YBX3P16989 372 aaKnown RBP eCLIP21.09■□□□□ 0.972e-6■□□□□ 10.4
CRIM1-203ENST00000426856 AMIGO3Q86WK7 504 aa21.09■□□□□ 0.97
CRIM1-203ENST00000426856 PIGBQ92521 554 aa21.09■□□□□ 0.97
CRIM1-203ENST00000426856 EYA1Q99502 592 aa21.09■□□□□ 0.97
CRIM1-203ENST00000426856 UBR3Q6ZT12 1888 aa21.09■□□□□ 0.97
CRIM1-203ENST00000426856 NKX1-1Q15270 411 aaPredicted RBP21.08■□□□□ 0.97
CRIM1-203ENST00000426856 TIMELESSQ9UNS1 1208 aa21.08■□□□□ 0.97
CRIM1-203ENST00000426856 SMARCC1Q92922 1105 aaPredicted RBP21.07■□□□□ 0.96
CRIM1-203ENST00000426856 POLKQ9UBT6 870 aa21.07■□□□□ 0.96
CRIM1-203ENST00000426856 SPG7Q9UQ90 795 aa21.07■□□□□ 0.96
CRIM1-203ENST00000426856 SMIM5Q71RC9 77 aa21.06■□□□□ 0.96
CRIM1-203ENST00000426856 FLAD1Q8NFF5 587 aa21.05■□□□□ 0.96
CRIM1-203ENST00000426856 AK7Q96M32 723 aa21.05■□□□□ 0.96
CRIM1-203ENST00000426856 POLR3GLQ9BT43 218 aa21.05■□□□□ 0.96
CRIM1-203ENST00000426856 C1QTNF8P60827 252 aa21.04■□□□□ 0.96
CRIM1-203ENST00000426856 PHF14O94880 888 aa21.03■□□□□ 0.96
CRIM1-203ENST00000426856 TNNT2P45379 298 aaPredicted RBP21.03■□□□□ 0.96
CRIM1-203ENST00000426856 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.03■□□□□ 0.964e-20■■□□□ 11.5
CRIM1-203ENST00000426856 LOC102724428A0A0B4J2F2 783 aa21.02■□□□□ 0.96
CRIM1-203ENST00000426856 HMGB2P26583 209 aaKnown RBP21.02■□□□□ 0.96
CRIM1-203ENST00000426856 SIK1P57059 783 aa21.02■□□□□ 0.96
CRIM1-203ENST00000426856 EIF4A2Q14240 407 aaKnown RBP21.02■□□□□ 0.96
CRIM1-203ENST00000426856 LINC00116Q8NCU8 138 aa21.02■□□□□ 0.96
CRIM1-203ENST00000426856 CD2APQ9Y5K6 639 aa21.02■□□□□ 0.96
CRIM1-203ENST00000426856 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.01■□□□□ 0.95
CRIM1-203ENST00000426856 PHKG2P15735 406 aa21.01■□□□□ 0.95
CRIM1-203ENST00000426856 PCGF6Q9BYE7 350 aa21.01■□□□□ 0.95
CRIM1-203ENST00000426856 TMOD3Q9NYL9 352 aa21.01■□□□□ 0.95
CRIM1-203ENST00000426856 ASAP1Q9ULH1 1129 aa21.01■□□□□ 0.95
CRIM1-203ENST00000426856 CLSPNQ9HAW4 1339 aa21.01■□□□□ 0.95
CRIM1-203ENST00000426856 GRIN3BO60391 1043 aa21■□□□□ 0.95
CRIM1-203ENST00000426856 SENP3-EIF4A1A0A087X0R7 540 aa20.99■□□□□ 0.95
CRIM1-203ENST00000426856 ITPK1Q13572 414 aa20.99■□□□□ 0.95
CRIM1-203ENST00000426856 IFNL2Q8IZJ0 200 aa20.99■□□□□ 0.95
CRIM1-203ENST00000426856 GIGYF1O75420 1035 aaPredicted RBP20.97■□□□□ 0.95
CRIM1-203ENST00000426856 SSFA2P28290 1259 aa20.97■□□□□ 0.95
CRIM1-203ENST00000426856 IGSF1Q8N6C5 1336 aa20.97■□□□□ 0.95
CRIM1-203ENST00000426856 ATG3Q9NT62 314 aa20.96■□□□□ 0.95
CRIM1-203ENST00000426856 GNPATO15228 680 aa20.95■□□□□ 0.94
CRIM1-203ENST00000426856 HSPA5P11021 654 aaKnown RBP20.95■□□□□ 0.94
CRIM1-203ENST00000426856 ATP6V1AP38606 617 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms