RNA–Protein interactions for RNA: ENST00000426646.1

TRAT1-202, Transcript of T cell receptor associated transmembrane adaptor 1, humanhuman

TSL 1 (best) BASIC

Gene TRAT1, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAT1-202ENST00000426646 GOLGA3Q08378 1498 aa8.3□□□□□ -1.08
TRAT1-202ENST00000426646 ZNF608Q9ULD9 1512 aaPredicted RBP8.3□□□□□ -1.08
TRAT1-202ENST00000426646 Q6ZVU0 165 aa8.3□□□□□ -1.08
TRAT1-202ENST00000426646 TSEN34Q9BSV6 310 aaKnown RBP8.3□□□□□ -1.08
TRAT1-202ENST00000426646 TRIM34Q9BYJ4 488 aa8.3□□□□□ -1.08
TRAT1-202ENST00000426646 EIF4G3O43432 1585 aaKnown RBP8.3□□□□□ -1.08
TRAT1-202ENST00000426646 CARMIL1Q5VZK9 1371 aa8.29□□□□□ -1.08
TRAT1-202ENST00000426646 MAN1A2O60476 641 aa8.29□□□□□ -1.08
TRAT1-202ENST00000426646 CBLBQ13191 982 aa8.29□□□□□ -1.08
TRAT1-202ENST00000426646 INTS6LQ5JSJ4 861 aaKnown RBP8.29□□□□□ -1.08
TRAT1-202ENST00000426646 PGPEP1Q9NXJ5 209 aa8.29□□□□□ -1.08
TRAT1-202ENST00000426646 KIF21BO75037 1637 aa8.29□□□□□ -1.08
TRAT1-202ENST00000426646 BRPF1P55201 1214 aaPredicted RBP8.28□□□□□ -1.08
TRAT1-202ENST00000426646 TMEM259Q4ZIN3 620 aa8.28□□□□□ -1.08
TRAT1-202ENST00000426646 PRXQ9BXM0 1461 aa8.28□□□□□ -1.08
TRAT1-202ENST00000426646 RAPGEF2Q9Y4G8 1499 aa8.28□□□□□ -1.08
TRAT1-202ENST00000426646 PBRM1Q86U86 1689 aa8.28□□□□□ -1.08
TRAT1-202ENST00000426646 UBTFP17480 764 aaKnown RBP8.27□□□□□ -1.09
TRAT1-202ENST00000426646 PNMA1Q8ND90 353 aa8.27□□□□□ -1.09
TRAT1-202ENST00000426646 DNMT3LQ9UJW3 386 aa8.27□□□□□ -1.09
TRAT1-202ENST00000426646 MAGI1Q96QZ7 1491 aaPredicted RBP8.27□□□□□ -1.09
TRAT1-202ENST00000426646 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
TRAT1-202ENST00000426646 DHX9Q08211 1270 aaKnown RBP8.27□□□□□ -1.09
TRAT1-202ENST00000426646 FHAD1B1AJZ9 1412 aa8.26□□□□□ -1.09
TRAT1-202ENST00000426646 SNAPC4Q5SXM2 1469 aa8.26□□□□□ -1.09
TRAT1-202ENST00000426646 LOC105371045A0A1W2PR82 267 aa8.25□□□□□ -1.09
TRAT1-202ENST00000426646 VSIG8P0DPA2 414 aa8.25□□□□□ -1.09
TRAT1-202ENST00000426646 GJD4Q96KN9 370 aaPredicted RBP8.25□□□□□ -1.09
TRAT1-202ENST00000426646 ADAMTS12P58397 1594 aa8.24□□□□□ -1.09
TRAT1-202ENST00000426646 TTLL8A6PVC2 850 aa8.24□□□□□ -1.09
TRAT1-202ENST00000426646 SPINT1O43278 529 aa8.24□□□□□ -1.09
TRAT1-202ENST00000426646 PPFIA3O75145 1194 aa8.24□□□□□ -1.09
TRAT1-202ENST00000426646 ESPNB1AK53 854 aa8.23□□□□□ -1.09
TRAT1-202ENST00000426646 NBPF20Q3BBV1 942 aa8.23□□□□□ -1.09
TRAT1-202ENST00000426646 DZIP3Q86Y13 1208 aaKnown RBP8.23□□□□□ -1.09
TRAT1-202ENST00000426646 CHMP7Q8WUX9 453 aaPredicted RBP8.23□□□□□ -1.09
TRAT1-202ENST00000426646 TMPRSS4Q9NRS4 437 aa8.23□□□□□ -1.09
TRAT1-202ENST00000426646 TNIKQ9UKE5 1360 aa8.23□□□□□ -1.09
TRAT1-202ENST00000426646 AGBL1Q96MI9 1066 aa8.22□□□□□ -1.09
TRAT1-202ENST00000426646 SYNJ2O15056 1496 aa8.22□□□□□ -1.09
TRAT1-202ENST00000426646 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.22□□□□□ -1.09
TRAT1-202ENST00000426646 FIGNL2A6NMB9 653 aa8.21□□□□□ -1.1
TRAT1-202ENST00000426646 ERVH48-1M5A8F1 160 aa8.21□□□□□ -1.1
TRAT1-202ENST00000426646 ZNF784Q8NCA9 323 aaPredicted RBP8.21□□□□□ -1.1
TRAT1-202ENST00000426646 LILRA1O75019 489 aa8.2□□□□□ -1.1
TRAT1-202ENST00000426646 ADD1P35611 737 aaKnown RBP8.2□□□□□ -1.1
TRAT1-202ENST00000426646 RAB15P59190 212 aa8.2□□□□□ -1.1
TRAT1-202ENST00000426646 ZSCAN1Q8NBB4 408 aa8.2□□□□□ -1.1
TRAT1-202ENST00000426646 GRIN2AQ12879 1464 aa8.19□□□□□ -1.1
TRAT1-202ENST00000426646 ZBBXA8MT70 800 aa8.19□□□□□ -1.1
TRAT1-202ENST00000426646 CTSOP43234 321 aaPredicted RBP8.19□□□□□ -1.1
TRAT1-202ENST00000426646 RELBQ01201 579 aa8.19□□□□□ -1.1
TRAT1-202ENST00000426646 PTSQ03393 145 aa8.19□□□□□ -1.1
TRAT1-202ENST00000426646 KDF1Q8NAX2 398 aaPredicted RBP8.19□□□□□ -1.1
TRAT1-202ENST00000426646 FBXO45P0C2W1 286 aa8.18□□□□□ -1.1
TRAT1-202ENST00000426646 INSM2Q96T92 566 aaPredicted RBP8.18□□□□□ -1.1
TRAT1-202ENST00000426646 TPRNQ4KMQ1 711 aa8.18□□□□□ -1.1
TRAT1-202ENST00000426646 SEPT12Q8IYM1 358 aa8.18□□□□□ -1.1
TRAT1-202ENST00000426646 BANK1Q8NDB2 785 aa8.18□□□□□ -1.1
TRAT1-202ENST00000426646 ZNF395Q9H8N7 513 aaPredicted RBP8.18□□□□□ -1.1
TRAT1-202ENST00000426646 GPR37L1O60883 481 aa8.17□□□□□ -1.1
TRAT1-202ENST00000426646 ADH1AP07327 375 aa8.17□□□□□ -1.1
TRAT1-202ENST00000426646 CEP162Q5TB80 1403 aa8.16□□□□□ -1.1
TRAT1-202ENST00000426646 GIGYF1O75420 1035 aaPredicted RBP8.16□□□□□ -1.1
TRAT1-202ENST00000426646 SLC35F4A4IF30 521 aa8.15□□□□□ -1.1
TRAT1-202ENST00000426646 SOCS7O14512 581 aa8.15□□□□□ -1.1
TRAT1-202ENST00000426646 PTGIRP43119 386 aa8.15□□□□□ -1.1
TRAT1-202ENST00000426646 GPR161Q8N6U8 529 aaKnown RBP8.15□□□□□ -1.1
TRAT1-202ENST00000426646 MTMR14Q8NCE2 650 aa8.15□□□□□ -1.1
TRAT1-202ENST00000426646 RNF217Q8TC41 542 aa8.15□□□□□ -1.1
TRAT1-202ENST00000426646 PCDHB9Q9Y5E1 797 aa8.15□□□□□ -1.1
TRAT1-202ENST00000426646 CLIP1P30622 1438 aa8.15□□□□□ -1.1
TRAT1-202ENST00000426646 CTTNBP2Q8WZ74 1663 aa8.15□□□□□ -1.11
TRAT1-202ENST00000426646 CCDC155Q8N6L0 562 aa8.14□□□□□ -1.11
TRAT1-202ENST00000426646 POLMQ9NP87 494 aaPredicted RBP8.14□□□□□ -1.11
TRAT1-202ENST00000426646 KIAA0586Q9BVV6 1533 aa8.14□□□□□ -1.11
TRAT1-202ENST00000426646 FAM181BA6NEQ2 426 aa8.14□□□□□ -1.11
TRAT1-202ENST00000426646 RANGAP1P46060 587 aaPredicted RBP8.14□□□□□ -1.11
TRAT1-202ENST00000426646 CYLDQ9NQC7 956 aa8.14□□□□□ -1.11
TRAT1-202ENST00000426646 SNRKQ9NRH2 765 aa8.14□□□□□ -1.11
TRAT1-202ENST00000426646 NUP160Q12769 1436 aa8.13□□□□□ -1.11
TRAT1-202ENST00000426646 IQGAP2Q13576 1575 aa8.13□□□□□ -1.11
TRAT1-202ENST00000426646 NR1H3Q13133 447 aa8.13□□□□□ -1.11
TRAT1-202ENST00000426646 FOXD4L5Q5VV16 416 aaPredicted RBP8.13□□□□□ -1.11
TRAT1-202ENST00000426646 NANOS1Q8WY41 292 aaKnown RBP8.13□□□□□ -1.11
TRAT1-202ENST00000426646 CHD1O14646 1710 aa8.12□□□□□ -1.11
TRAT1-202ENST00000426646 KRT76Q01546 638 aa8.12□□□□□ -1.11
TRAT1-202ENST00000426646 EFCAB5A4FU69 1503 aa8.12□□□□□ -1.11
TRAT1-202ENST00000426646 CEP170Q5SW79 1584 aa8.11□□□□□ -1.11
TRAT1-202ENST00000426646 SENP3-EIF4A1A0A087X0R7 540 aa8.11□□□□□ -1.11
TRAT1-202ENST00000426646 NDUFB9Q9Y6M9 179 aa8.1□□□□□ -1.11
TRAT1-202ENST00000426646 ITGA6P23229 1130 aa8.1□□□□□ -1.11
TRAT1-202ENST00000426646 MCCD1P59942 119 aaPredicted RBP8.1□□□□□ -1.11
TRAT1-202ENST00000426646 CCDC125Q86Z20 511 aa8.1□□□□□ -1.11
TRAT1-202ENST00000426646 CARMIL2Q6F5E8 1435 aa8.09□□□□□ -1.11
TRAT1-202ENST00000426646 RNF144AP50876 292 aaPredicted RBP8.09□□□□□ -1.11
TRAT1-202ENST00000426646 ERVK-9P63128 1117 aa8.09□□□□□ -1.11
TRAT1-202ENST00000426646 TRIM52Q96A61 297 aa8.09□□□□□ -1.11
TRAT1-202ENST00000426646 UGGT2Q9NYU1 1516 aa8.08□□□□□ -1.12
TRAT1-202ENST00000426646 ATP5J2-PTCD1G3V325 749 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms