RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 FOXD4L5Q5VV16 416 aaPredicted RBP12.12□□□□□ -0.47
SP1-202ENST00000426431 FOXD4L4Q8WXT5 416 aaPredicted RBP12.12□□□□□ -0.47
SP1-202ENST00000426431 RIMS2Q9UQ26 1411 aa12.12□□□□□ -0.47
SP1-202ENST00000426431 IFIT1P09914 478 aaKnown RBP12.11□□□□□ -0.47
SP1-202ENST00000426431 TSR2Q969E8 191 aaKnown RBP12.11□□□□□ -0.47
SP1-202ENST00000426431 DUSP27Q5VZP5 1158 aa12.11□□□□□ -0.47
SP1-202ENST00000426431 FBXO31Q5XUX0 539 aaPredicted RBP12.11□□□□□ -0.47
SP1-202ENST00000426431 FYB1O15117 783 aa12.11□□□□□ -0.47
SP1-202ENST00000426431 CFAP43Q8NDM7 1665 aa12.11□□□□□ -0.47
SP1-202ENST00000426431 CDK5RAP3Q96JB5 506 aa12.1□□□□□ -0.47
SP1-202ENST00000426431 MYL6BP14649 208 aa12.1□□□□□ -0.47
SP1-202ENST00000426431 RDXP35241 583 aaKnown RBP12.1□□□□□ -0.47
SP1-202ENST00000426431 NKTRP30414 1462 aaKnown RBP12.1□□□□□ -0.47
SP1-202ENST00000426431 CFAP74Q9C0B2 1584 aa12.1□□□□□ -0.47
SP1-202ENST00000426431 WDHD1O75717 1129 aaPredicted RBP12.1□□□□□ -0.47
SP1-202ENST00000426431 GLRX3O76003 335 aaKnown RBP12.1□□□□□ -0.47
SP1-202ENST00000426431 CAVIN4Q5BKX8 364 aa12.1□□□□□ -0.47
SP1-202ENST00000426431 NOL7Q9UMY1 257 aaKnown RBP12.1□□□□□ -0.47
SP1-202ENST00000426431 TRPM2O94759 1503 aa12.1□□□□□ -0.47
SP1-202ENST00000426431 CHD1LQ86WJ1 897 aa12.1□□□□□ -0.47
SP1-202ENST00000426431 KINO60870 393 aaKnown RBP12.09□□□□□ -0.47
SP1-202ENST00000426431 SOGA3Q5TF21 947 aa12.09□□□□□ -0.47
SP1-202ENST00000426431 CDCA7LQ96GN5 454 aa12.09□□□□□ -0.47
SP1-202ENST00000426431 CCDC69A6NI79 296 aa12.09□□□□□ -0.47
SP1-202ENST00000426431 DACH1Q9UI36 760 aa12.09□□□□□ -0.47
SP1-202ENST00000426431 AACSQ86V21 672 aa12.09□□□□□ -0.47
SP1-202ENST00000426431 NGLY1Q96IV0 654 aa12.09□□□□□ -0.47
SP1-202ENST00000426431 ARHGEF12Q9NZN5 1544 aa12.09□□□□□ -0.47
SP1-202ENST00000426431 FAM177BA6PVY3 158 aa12.09□□□□□ -0.47
SP1-202ENST00000426431 EPS15P42566 896 aa12.09□□□□□ -0.47
SP1-202ENST00000426431 SDF4Q9BRK5 362 aa12.09□□□□□ -0.47
SP1-202ENST00000426431 TXLNBQ8N3L3 684 aa12.09□□□□□ -0.47
SP1-202ENST00000426431 FOXO3O43524 673 aa12.08□□□□□ -0.47
SP1-202ENST00000426431 SOS1Q07889 1333 aaPredicted RBP12.08□□□□□ -0.48
SP1-202ENST00000426431 GSE1Q14687 1217 aa12.08□□□□□ -0.48
SP1-202ENST00000426431 SMARCC1Q92922 1105 aaPredicted RBP12.08□□□□□ -0.48
SP1-202ENST00000426431 NEK4P51957 841 aa12.08□□□□□ -0.48
SP1-202ENST00000426431 CCP110O43303 1012 aa12.08□□□□□ -0.48
SP1-202ENST00000426431 PBRM1Q86U86 1689 aa12.08□□□□□ -0.48
SP1-202ENST00000426431 WDR33Q9C0J8 1336 aaKnown RBP12.08□□□□□ -0.48
SP1-202ENST00000426431 NME9Q86XW9 330 aa12.07□□□□□ -0.48
SP1-202ENST00000426431 UBAC1Q9BSL1 405 aa12.07□□□□□ -0.48
SP1-202ENST00000426431 FILIP1LQ4L180 1135 aa12.07□□□□□ -0.48
SP1-202ENST00000426431 BLOC1S2Q6QNY1 142 aa12.07□□□□□ -0.48
SP1-202ENST00000426431 CIZ1Q9ULV3 898 aaPredicted RBP12.07□□□□□ -0.48
SP1-202ENST00000426431 STIM1Q13586 685 aa12.07□□□□□ -0.48
SP1-202ENST00000426431 U3KPZ7 1027 aaPredicted RBP12.06□□□□□ -0.48
SP1-202ENST00000426431 HMGB1P09429 215 aaKnown RBP12.06□□□□□ -0.48
SP1-202ENST00000426431 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
SP1-202ENST00000426431 IFIT5Q13325 482 aaKnown RBP12.06□□□□□ -0.48
SP1-202ENST00000426431 IMMTQ16891 758 aaKnown RBP12.06□□□□□ -0.48
SP1-202ENST00000426431 LRP2BPQ9P2M1 347 aa12.06□□□□□ -0.48
SP1-202ENST00000426431 NEO1Q92859 1461 aa12.06□□□□□ -0.48
SP1-202ENST00000426431 METTL24Q5JXM2 366 aa12.06□□□□□ -0.48
SP1-202ENST00000426431 ACEP12821 1306 aa12.06□□□□□ -0.48
SP1-202ENST00000426431 CCDC196A0A1B0GTZ2 297 aa12.06□□□□□ -0.48
SP1-202ENST00000426431 PIK3R4Q99570 1358 aa12.06□□□□□ -0.48
SP1-202ENST00000426431 SLC5A1P13866 664 aa12.06□□□□□ -0.48
SP1-202ENST00000426431 CDC5LQ99459 802 aaKnown RBP12.06□□□□□ -0.48
SP1-202ENST00000426431 ZFYVE9O95405 1425 aa12.06□□□□□ -0.48
SP1-202ENST00000426431 ATP10AO60312 1499 aa12.05□□□□□ -0.48
SP1-202ENST00000426431 TDO2P48775 406 aa12.05□□□□□ -0.48
SP1-202ENST00000426431 XPCQ01831 940 aaPredicted RBP12.05□□□□□ -0.48
SP1-202ENST00000426431 DNAAF4Q8WXU2 420 aa12.05□□□□□ -0.48
SP1-202ENST00000426431 CDR1P51861 262 aa12.05□□□□□ -0.48
SP1-202ENST00000426431 ASXL1Q8IXJ9 1541 aa12.05□□□□□ -0.48
SP1-202ENST00000426431 C19orf44Q9H6X5 657 aa12.05□□□□□ -0.48
SP1-202ENST00000426431 CCDC173Q0VFZ6 552 aa12.05□□□□□ -0.48
SP1-202ENST00000426431 STK38Q15208 465 aa12.05□□□□□ -0.48
SP1-202ENST00000426431 PPP1R42Q7Z4L9 355 aa12.05□□□□□ -0.48
SP1-202ENST00000426431 LUC7LQ9NQ29 371 aaKnown RBP12.05□□□□□ -0.48
SP1-202ENST00000426431 OFD1O75665 1012 aa12.05□□□□□ -0.48
SP1-202ENST00000426431 RAI14Q9P0K7 980 aa12.05□□□□□ -0.48
SP1-202ENST00000426431 SMARCE1Q969G3 411 aa12.05□□□□□ -0.48
SP1-202ENST00000426431 MAGEC2Q9UBF1 373 aaPredicted RBP12.05□□□□□ -0.48
SP1-202ENST00000426431 PPP4R3BQ5MIZ7 849 aa12.04□□□□□ -0.48
SP1-202ENST00000426431 AIDAQ96BJ3 306 aa12.04□□□□□ -0.48
SP1-202ENST00000426431 PRM3Q9NNZ6 103 aa12.04□□□□□ -0.48
SP1-202ENST00000426431 CEBPAP49715 358 aaPredicted RBP12.04□□□□□ -0.48
SP1-202ENST00000426431 MAP3K12Q12852 859 aa12.04□□□□□ -0.48
SP1-202ENST00000426431 TTF1Q15361 905 aaPredicted RBP12.04□□□□□ -0.48
SP1-202ENST00000426431 RNF41Q9H4P4 317 aaPredicted RBP12.04□□□□□ -0.48
SP1-202ENST00000426431 CFAP45Q9UL16 551 aa12.04□□□□□ -0.48
SP1-202ENST00000426431 TBX22Q9Y458 520 aa12.04□□□□□ -0.48
SP1-202ENST00000426431 ANKRD18BA2A2Z9 1011 aa12.04□□□□□ -0.48
SP1-202ENST00000426431 RRP12Q5JTH9 1297 aaKnown RBP12.04□□□□□ -0.48
SP1-202ENST00000426431 BCAR3O75815 825 aa12.04□□□□□ -0.48
SP1-202ENST00000426431 LDHCP07864 332 aa12.04□□□□□ -0.48
SP1-202ENST00000426431 CT47A1Q5JQC4 288 aaPredicted RBP12.04□□□□□ -0.48
SP1-202ENST00000426431 CDCA7Q9BWT1 371 aaPredicted RBP12.04□□□□□ -0.48
SP1-202ENST00000426431 MYO6Q9UM54 1294 aa12.04□□□□□ -0.48
SP1-202ENST00000426431 ODF2Q5BJF6 829 aa12.04□□□□□ -0.48
SP1-202ENST00000426431 FAM13BQ9NYF5 915 aa12.04□□□□□ -0.48
SP1-202ENST00000426431 PLEKHH1Q9ULM0 1364 aa12.04□□□□□ -0.48
SP1-202ENST00000426431 SNRPA1P09661 255 aaKnown RBP12.04□□□□□ -0.48
SP1-202ENST00000426431 BMP2KQ9NSY1 1161 aaPredicted RBP12.04□□□□□ -0.48
SP1-202ENST00000426431 ARHGAP45Q92619 1136 aa12.03□□□□□ -0.48
SP1-202ENST00000426431 CEP131Q9UPN4 1083 aa12.03□□□□□ -0.48
SP1-202ENST00000426431 FKBP4Q02790 459 aaKnown RBP eCLIP12.03□□□□□ -0.48
SP1-202ENST00000426431 RBM5P52756 815 aaKnown RBP eCLIP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms