RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 VAMP4O75379 141 aa16.54■□□□□ 0.24
LRCH3-203ENST00000425562 C8orf58Q8NAV2 365 aa16.54■□□□□ 0.24
LRCH3-203ENST00000425562 BCL11BQ9C0K0 894 aaPredicted RBP16.54■□□□□ 0.24
LRCH3-203ENST00000425562 TMEM131LA2VDJ0 1609 aa16.53■□□□□ 0.24
LRCH3-203ENST00000425562 ZNF445P59923 1031 aa16.53■□□□□ 0.24
LRCH3-203ENST00000425562 NFE2L2Q16236 605 aa16.53■□□□□ 0.24
LRCH3-203ENST00000425562 RABEP1Q15276 862 aa16.53■□□□□ 0.24
LRCH3-203ENST00000425562 USP26Q9BXU7 913 aa16.53■□□□□ 0.24
LRCH3-203ENST00000425562 ALKQ9UM73 1620 aa16.52■□□□□ 0.24
LRCH3-203ENST00000425562 NEO1Q92859 1461 aa16.52■□□□□ 0.24
LRCH3-203ENST00000425562 PTMSP20962 102 aa16.52■□□□□ 0.24
LRCH3-203ENST00000425562 NUCB2P80303 420 aa16.52■□□□□ 0.24
LRCH3-203ENST00000425562 MRPL50Q8N5N7 158 aaKnown RBP16.52■□□□□ 0.24
LRCH3-203ENST00000425562 ZKSCAN5Q9Y2L8 839 aa16.52■□□□□ 0.24
LRCH3-203ENST00000425562 PREX1Q8TCU6 1659 aa16.52■□□□□ 0.24
LRCH3-203ENST00000425562 SDSP20132 328 aa16.52■□□□□ 0.23
LRCH3-203ENST00000425562 AEBP1Q8IUX7 1158 aa16.52■□□□□ 0.23
LRCH3-203ENST00000425562 IL16Q14005 1332 aa16.52■□□□□ 0.23
LRCH3-203ENST00000425562 NEK4P51957 841 aa16.51■□□□□ 0.23
LRCH3-203ENST00000425562 PRDM4Q9UKN5 801 aa16.51■□□□□ 0.23
LRCH3-203ENST00000425562 TWISTNBQ3B726 338 aaPredicted RBP16.51■□□□□ 0.23
LRCH3-203ENST00000425562 LARP6Q9BRS8 491 aaKnown RBP16.51■□□□□ 0.23
LRCH3-203ENST00000425562 ARHGAP31Q2M1Z3 1444 aa16.51■□□□□ 0.23
LRCH3-203ENST00000425562 MAP2P11137 1827 aaKnown RBP16.51■□□□□ 0.23
LRCH3-203ENST00000425562 ARHGEF40Q8TER5 1519 aa16.5■□□□□ 0.23
LRCH3-203ENST00000425562 TSPOAP1O95153 1857 aa16.5■□□□□ 0.23
LRCH3-203ENST00000425562 PNPLA6Q8IY17 1366 aa16.5■□□□□ 0.23
LRCH3-203ENST00000425562 RICTORQ6R327 1708 aa16.5■□□□□ 0.23
LRCH3-203ENST00000425562 IL13P35225 146 aa16.49■□□□□ 0.23
LRCH3-203ENST00000425562 TTC22Q5TAA0 569 aa16.49■□□□□ 0.23
LRCH3-203ENST00000425562 ZFYVE9O95405 1425 aa16.49■□□□□ 0.23
LRCH3-203ENST00000425562 ST18O60284 1047 aa16.49■□□□□ 0.23
LRCH3-203ENST00000425562 PLEKHG5O94827 1062 aa16.49■□□□□ 0.23
LRCH3-203ENST00000425562 ALDH1L2Q3SY69 923 aa16.48■□□□□ 0.23
LRCH3-203ENST00000425562 NUDT16Q96DE0 195 aaKnown RBP16.48■□□□□ 0.23
LRCH3-203ENST00000425562 FAM135BQ49AJ0 1406 aa16.48■□□□□ 0.23
LRCH3-203ENST00000425562 IGSF3O75054 1194 aa16.48■□□□□ 0.23
LRCH3-203ENST00000425562 CBX1P83916 185 aa16.48■□□□□ 0.23
LRCH3-203ENST00000425562 UPF3BQ9BZI7 483 aaKnown RBP16.48■□□□□ 0.23
LRCH3-203ENST00000425562 TTC12Q9H892 705 aaPredicted RBP16.48■□□□□ 0.23
LRCH3-203ENST00000425562 MIS18AQ9NYP9 233 aa16.48■□□□□ 0.23
LRCH3-203ENST00000425562 WASLO00401 505 aaPredicted RBP16.47■□□□□ 0.23
LRCH3-203ENST00000425562 MCM10Q7L590 875 aa16.47■□□□□ 0.23
LRCH3-203ENST00000425562 COG3Q96JB2 828 aa16.47■□□□□ 0.23
LRCH3-203ENST00000425562 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.47■□□□□ 0.23
LRCH3-203ENST00000425562 METP08581 1390 aa16.47■□□□□ 0.23
LRCH3-203ENST00000425562 GADD45BO75293 160 aaPredicted RBP16.47■□□□□ 0.23
LRCH3-203ENST00000425562 LRSAM1Q6UWE0 723 aa16.47■□□□□ 0.23
LRCH3-203ENST00000425562 PDLIM2Q96JY6 352 aa16.47■□□□□ 0.23
LRCH3-203ENST00000425562 ZNF500O60304 480 aaPredicted RBP16.47■□□□□ 0.23
LRCH3-203ENST00000425562 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
LRCH3-203ENST00000425562 INTS3Q68E01 1043 aaKnown RBP16.47■□□□□ 0.23
LRCH3-203ENST00000425562 SLC4A10Q6U841 1118 aa16.47■□□□□ 0.23
LRCH3-203ENST00000425562 CYP2E1P05181 493 aaPredicted RBP16.46■□□□□ 0.23
LRCH3-203ENST00000425562 PODXL2Q9NZ53 605 aa16.46■□□□□ 0.23
LRCH3-203ENST00000425562 USP25Q9UHP3 1055 aa16.46■□□□□ 0.23
LRCH3-203ENST00000425562 GNAI1P63096 354 aa16.46■□□□□ 0.23
LRCH3-203ENST00000425562 RIMS2Q9UQ26 1411 aa16.45■□□□□ 0.22
LRCH3-203ENST00000425562 SULT6B1Q6IMI4 303 aa16.45■□□□□ 0.22
LRCH3-203ENST00000425562 KIF20BQ96Q89 1820 aa16.45■□□□□ 0.22
LRCH3-203ENST00000425562 ANKRD26Q9UPS8 1709 aa16.44■□□□□ 0.22
LRCH3-203ENST00000425562 TMX3Q96JJ7 454 aa16.44■□□□□ 0.22
LRCH3-203ENST00000425562 CCDC39Q9UFE4 941 aa16.44■□□□□ 0.22
LRCH3-203ENST00000425562 SPDYE4A6NLX3 237 aa16.44■□□□□ 0.22
LRCH3-203ENST00000425562 MEIS3Q99687 375 aa16.44■□□□□ 0.22
LRCH3-203ENST00000425562 CLEC17AQ6ZS10 378 aa16.43■□□□□ 0.22
LRCH3-203ENST00000425562 IFT57Q9NWB7 429 aa16.43■□□□□ 0.22
LRCH3-203ENST00000425562 PALD1Q9ULE6 856 aa16.43■□□□□ 0.22
LRCH3-203ENST00000425562 SASS6Q6UVJ0 657 aa16.43■□□□□ 0.22
LRCH3-203ENST00000425562 RILPL2Q969X0 211 aa16.43■□□□□ 0.22
LRCH3-203ENST00000425562 EXOC6BQ9Y2D4 811 aa16.42■□□□□ 0.22
LRCH3-203ENST00000425562 CASC1Q6TDU7 716 aa16.42■□□□□ 0.22
LRCH3-203ENST00000425562 ESF1Q9H501 851 aaKnown RBP16.42■□□□□ 0.22
LRCH3-203ENST00000425562 MED14O60244 1454 aa16.42■□□□□ 0.22
LRCH3-203ENST00000425562 CPS1P31327 1500 aa16.41■□□□□ 0.22
LRCH3-203ENST00000425562 F6X3S4 739 aa16.41■□□□□ 0.22
LRCH3-203ENST00000425562 CFAP44Q96MT7 982 aa16.41■□□□□ 0.22
LRCH3-203ENST00000425562 TSPY26PQ9H489 355 aa16.41■□□□□ 0.22
LRCH3-203ENST00000425562 DCTPP1Q9H773 170 aa16.41■□□□□ 0.22
LRCH3-203ENST00000425562 ANO2Q9NQ90 1003 aa16.41■□□□□ 0.22
LRCH3-203ENST00000425562 IBTKQ9P2D0 1353 aaPredicted RBP16.41■□□□□ 0.22
LRCH3-203ENST00000425562 KIAA2012Q0VF49 1180 aa16.41■□□□□ 0.22
LRCH3-203ENST00000425562 A2ML1A8K2U0 1454 aa16.41■□□□□ 0.22
LRCH3-203ENST00000425562 TRIM6-TRIM34B2RNG4 842 aa16.41■□□□□ 0.22
LRCH3-203ENST00000425562 HSP90AB2PQ58FF8 381 aa16.41■□□□□ 0.22
LRCH3-203ENST00000425562 NECTIN2Q92692 538 aa16.4■□□□□ 0.22
LRCH3-203ENST00000425562 CCDC61Q9Y6R9 512 aa16.4■□□□□ 0.22
LRCH3-203ENST00000425562 PRR36Q9H6K5 1346 aa16.4■□□□□ 0.22
LRCH3-203ENST00000425562 DYNC1I1O14576 645 aa16.4■□□□□ 0.22
LRCH3-203ENST00000425562 FOXO3O43524 673 aa16.4■□□□□ 0.22
LRCH3-203ENST00000425562 ZNF853P0CG23 659 aa16.4■□□□□ 0.22
LRCH3-203ENST00000425562 CHMP3Q9Y3E7 222 aa16.4■□□□□ 0.22
LRCH3-203ENST00000425562 CLTCQ00610 1675 aaKnown RBP16.4■□□□□ 0.22
LRCH3-203ENST00000425562 MAP4K4O95819 1239 aaPredicted RBP16.39■□□□□ 0.21
LRCH3-203ENST00000425562 HCLS1P14317 486 aaPredicted RBP16.39■□□□□ 0.21
LRCH3-203ENST00000425562 CSPP1Q1MSJ5 1256 aa16.39■□□□□ 0.21
LRCH3-203ENST00000425562 ABCC4O15439 1325 aa16.39■□□□□ 0.21
LRCH3-203ENST00000425562 EIF4A2Q14240 407 aaKnown RBP16.39■□□□□ 0.21
LRCH3-203ENST00000425562 CWC22Q9HCG8 908 aaKnown RBP16.39■□□□□ 0.21
LRCH3-203ENST00000425562 HS1BP3Q53T59 392 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms