RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 LY75O60449 1722 aa22.77■■□□□ 1.24
PUDP-203ENST00000424830 AMPHP49418 695 aa22.77■■□□□ 1.24
PUDP-203ENST00000424830 PRIM1P49642 420 aaKnown RBP22.77■■□□□ 1.24
PUDP-203ENST00000424830 PELP1Q8IZL8 1130 aaKnown RBP22.77■■□□□ 1.24
PUDP-203ENST00000424830 TONSLQ96HA7 1378 aa22.76■■□□□ 1.23
PUDP-203ENST00000424830 MAP3K19Q56UN5 1328 aa22.76■■□□□ 1.23
PUDP-203ENST00000424830 HOXC9P31274 260 aa22.76■■□□□ 1.23
PUDP-203ENST00000424830 ZCRB1Q8TBF4 217 aaKnown RBP22.75■■□□□ 1.23
PUDP-203ENST00000424830 SHANK3Q9BYB0 1731 aa22.75■■□□□ 1.23
PUDP-203ENST00000424830 RGPD2P0DJD1 1756 aa22.74■■□□□ 1.23
PUDP-203ENST00000424830 KCNQ4P56696 695 aa22.74■■□□□ 1.23
PUDP-203ENST00000424830 CCNL1Q9UK58 526 aaPredicted RBP22.73■■□□□ 1.23
PUDP-203ENST00000424830 MEGF6O75095 1541 aa22.73■■□□□ 1.23
PUDP-203ENST00000424830 NSD2O96028 1365 aa22.73■■□□□ 1.23
PUDP-203ENST00000424830 SLC24A1O60721 1099 aa22.72■■□□□ 1.23
PUDP-203ENST00000424830 RTL1A6NKG5 1358 aa22.72■■□□□ 1.23
PUDP-203ENST00000424830 GIGYF1O75420 1035 aaPredicted RBP22.71■■□□□ 1.23
PUDP-203ENST00000424830 USP47Q96K76 1375 aa22.71■■□□□ 1.23
PUDP-203ENST00000424830 MSH5O43196 834 aa22.69■■□□□ 1.22
PUDP-203ENST00000424830 NLGN2Q8NFZ4 835 aa22.69■■□□□ 1.22
PUDP-203ENST00000424830 SMG6Q86US8 1419 aaKnown RBP22.69■■□□□ 1.22
PUDP-203ENST00000424830 CGNL1Q0VF96 1302 aa22.69■■□□□ 1.22
PUDP-203ENST00000424830 ST20-MTHFSA0A0A6YYL1 179 aa22.68■■□□□ 1.22
PUDP-203ENST00000424830 TESK2Q96S53 571 aa22.68■■□□□ 1.22
PUDP-203ENST00000424830 FBLN1P23142 703 aa22.67■■□□□ 1.22
PUDP-203ENST00000424830 GRIN3BO60391 1043 aa22.66■■□□□ 1.22
PUDP-203ENST00000424830 RAPGEF4Q8WZA2 1011 aa22.66■■□□□ 1.22
PUDP-203ENST00000424830 HMGB2P26583 209 aaKnown RBP22.65■■□□□ 1.22
PUDP-203ENST00000424830 NBPF6Q5VWK0 638 aa22.65■■□□□ 1.22
PUDP-203ENST00000424830 NBPF4Q96M43 638 aa22.65■■□□□ 1.22
PUDP-203ENST00000424830 RRS1Q15050 365 aaKnown RBP22.64■■□□□ 1.22
PUDP-203ENST00000424830 COL23A1Q86Y22 540 aaPredicted RBP22.64■■□□□ 1.22
PUDP-203ENST00000424830 C5P01031 1676 aa22.64■■□□□ 1.21
PUDP-203ENST00000424830 USHBP1Q8N6Y0 703 aa22.63■■□□□ 1.21
PUDP-203ENST00000424830 TATP17735 454 aaPredicted RBP22.62■■□□□ 1.21
PUDP-203ENST00000424830 YBX3P16989 372 aaKnown RBP eCLIP22.61■■□□□ 1.215e-7■■□□□ 12.5
PUDP-203ENST00000424830 GGNBP2Q9H3C7 697 aa22.61■■□□□ 1.21
PUDP-203ENST00000424830 PCDH11XQ9BZA7 1347 aa22.61■■□□□ 1.21
PUDP-203ENST00000424830 PCDH11YQ9BZA8 1340 aa22.61■■□□□ 1.21
PUDP-203ENST00000424830 CEP350Q5VT06 3117 aa22.61■■□□□ 1.21
PUDP-203ENST00000424830 MSL1Q68DK7 614 aa22.6■■□□□ 1.21
PUDP-203ENST00000424830 FLAD1Q8NFF5 587 aa22.6■■□□□ 1.21
PUDP-203ENST00000424830 FYB1O15117 783 aa22.59■■□□□ 1.21
PUDP-203ENST00000424830 PALLDQ8WX93 1383 aa22.58■■□□□ 1.21
PUDP-203ENST00000424830 TAF1LQ8IZX4 1826 aa22.58■■□□□ 1.21
PUDP-203ENST00000424830 KIF20BQ96Q89 1820 aa22.58■■□□□ 1.21
PUDP-203ENST00000424830 INSRP06213 1382 aa22.57■■□□□ 1.2
PUDP-203ENST00000424830 FLT4P35916 1363 aa22.57■■□□□ 1.2
PUDP-203ENST00000424830 TMF1P82094 1093 aa22.57■■□□□ 1.2
PUDP-203ENST00000424830 MPRIPQ6WCQ1 1025 aa22.57■■□□□ 1.2
PUDP-203ENST00000424830 CD2APQ9Y5K6 639 aa22.57■■□□□ 1.2
PUDP-203ENST00000424830 KIF24Q5T7B8 1368 aa22.56■■□□□ 1.2
PUDP-203ENST00000424830 HSP90AB2PQ58FF8 381 aa22.56■■□□□ 1.2
PUDP-203ENST00000424830 SMARCC1Q92922 1105 aaPredicted RBP22.54■■□□□ 1.2
PUDP-203ENST00000424830 C4BP0C0L5 1744 aa22.53■■□□□ 1.2
PUDP-203ENST00000424830 ATP10DQ9P241 1426 aa22.53■■□□□ 1.2
PUDP-203ENST00000424830 ITGB4P16144 1822 aa22.53■■□□□ 1.2
PUDP-203ENST00000424830 AK7Q96M32 723 aa22.53■■□□□ 1.2
PUDP-203ENST00000424830 TOGARAM1Q9Y4F4 1720 aa22.52■■□□□ 1.2
PUDP-203ENST00000424830 CDCA8Q53HL2 280 aa22.52■■□□□ 1.2
PUDP-203ENST00000424830 NSD3Q9BZ95 1437 aa22.51■■□□□ 1.19
PUDP-203ENST00000424830 PKD1L3Q7Z443 1732 aa22.51■■□□□ 1.19
PUDP-203ENST00000424830 CYP27B1O15528 508 aa22.51■■□□□ 1.19
PUDP-203ENST00000424830 UBR3Q6ZT12 1888 aa22.48■■□□□ 1.19
PUDP-203ENST00000424830 GPBP1L1Q9HC44 474 aaPredicted RBP22.48■■□□□ 1.19
PUDP-203ENST00000424830 PHF14O94880 888 aa22.47■■□□□ 1.19
PUDP-203ENST00000424830 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.45■■□□□ 1.18
PUDP-203ENST00000424830 PIGBQ92521 554 aa22.45■■□□□ 1.18
PUDP-203ENST00000424830 SPG7Q9UQ90 795 aa22.45■■□□□ 1.18
PUDP-203ENST00000424830 EMILIN1Q9Y6C2 1016 aa22.45■■□□□ 1.18
PUDP-203ENST00000424830 ADCY9O60503 1353 aa22.44■■□□□ 1.18
PUDP-203ENST00000424830 SSFA2P28290 1259 aa22.44■■□□□ 1.18
PUDP-203ENST00000424830 IGSF1Q8N6C5 1336 aa22.44■■□□□ 1.18
PUDP-203ENST00000424830 PPM1GO15355 546 aaPredicted RBP22.43■■□□□ 1.18
PUDP-203ENST00000424830 NKX1-1Q15270 411 aaPredicted RBP22.43■■□□□ 1.18
PUDP-203ENST00000424830 NCAPD2Q15021 1401 aa22.43■■□□□ 1.18
PUDP-203ENST00000424830 ANKRD26Q9UPS8 1709 aa22.43■■□□□ 1.18
PUDP-203ENST00000424830 LOC102724428A0A0B4J2F2 783 aa22.42■■□□□ 1.18
PUDP-203ENST00000424830 SIK1P57059 783 aa22.42■■□□□ 1.18
PUDP-203ENST00000424830 AMIGO3Q86WK7 504 aa22.42■■□□□ 1.18
PUDP-203ENST00000424830 TMOD3Q9NYL9 352 aa22.42■■□□□ 1.18
PUDP-203ENST00000424830 MAP2P11137 1827 aaKnown RBP22.42■■□□□ 1.18
PUDP-203ENST00000424830 ZNF526Q8TF50 670 aaPredicted RBP22.41■■□□□ 1.18
PUDP-203ENST00000424830 IFFO2Q5TF58 517 aa22.4■■□□□ 1.18
PUDP-203ENST00000424830 LINC00116Q8NCU8 138 aa22.39■■□□□ 1.18
PUDP-203ENST00000424830 CARD14Q9BXL6 1004 aa22.39■■□□□ 1.18
PUDP-203ENST00000424830 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.39■■□□□ 1.18
PUDP-203ENST00000424830 WWC3Q9ULE0 1092 aa22.39■■□□□ 1.18
PUDP-203ENST00000424830 GNPATO15228 680 aa22.38■■□□□ 1.17
PUDP-203ENST00000424830 SMIM5Q71RC9 77 aa22.38■■□□□ 1.17
PUDP-203ENST00000424830 WASHC2AQ641Q2 1341 aa22.38■■□□□ 1.17
PUDP-203ENST00000424830 HSPA6P17066 643 aa22.36■■□□□ 1.17
PUDP-203ENST00000424830 ATP6V1AP38606 617 aa22.36■■□□□ 1.17
PUDP-203ENST00000424830 IFNL2Q8IZJ0 200 aa22.35■■□□□ 1.17
PUDP-203ENST00000424830 EYA1Q99502 592 aa22.35■■□□□ 1.17
PUDP-203ENST00000424830 ASAP1Q9ULH1 1129 aa22.35■■□□□ 1.17
PUDP-203ENST00000424830 PHKG2P15735 406 aa22.33■■□□□ 1.17
PUDP-203ENST00000424830 ITPK1Q13572 414 aa22.33■■□□□ 1.17
PUDP-203ENST00000424830 CICQ96RK0 1608 aaPredicted RBP22.32■■□□□ 1.16
PUDP-203ENST00000424830 MMP10P09238 476 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms