RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 DLG5Q8TDM6 1919 aa21.08■□□□□ 0.96
CMTM3-202ENST00000424011 VAMP4O75379 141 aa21.07■□□□□ 0.96
CMTM3-202ENST00000424011 NOB1Q9ULX3 412 aaKnown RBP21.07■□□□□ 0.96
CMTM3-202ENST00000424011 TRIM27P14373 513 aa21.07■□□□□ 0.96
CMTM3-202ENST00000424011 IP6K1Q92551 441 aa21.07■□□□□ 0.96
CMTM3-202ENST00000424011 SLAIN2Q9P270 581 aa21.07■□□□□ 0.96
CMTM3-202ENST00000424011 NPHP3Q7Z494 1330 aa21.07■□□□□ 0.96
CMTM3-202ENST00000424011 RTF1Q92541 710 aaKnown RBP21.06■□□□□ 0.96
CMTM3-202ENST00000424011 NFAT5O94916 1531 aa21.06■□□□□ 0.96
CMTM3-202ENST00000424011 DCTN1Q14203 1278 aa21.06■□□□□ 0.96
CMTM3-202ENST00000424011 NPM2Q86SE8 214 aaKnown RBP21.06■□□□□ 0.96
CMTM3-202ENST00000424011 DDX17Q92841 729 aaKnown RBP21.06■□□□□ 0.96
CMTM3-202ENST00000424011 TRPM3Q9HCF6 1732 aaPredicted RBP21.05■□□□□ 0.96
CMTM3-202ENST00000424011 HTATSF1O43719 755 aaKnown RBP21.05■□□□□ 0.96
CMTM3-202ENST00000424011 TWISTNBQ3B726 338 aaPredicted RBP21.05■□□□□ 0.96
CMTM3-202ENST00000424011 BRINP3Q76B58 766 aa21.05■□□□□ 0.96
CMTM3-202ENST00000424011 DDX19BQ9UMR2 479 aa21.05■□□□□ 0.96
CMTM3-202ENST00000424011 MTHFSDQ2M296 383 aaKnown RBP21.04■□□□□ 0.96
CMTM3-202ENST00000424011 ARHGAP45Q92619 1136 aa21.04■□□□□ 0.96
CMTM3-202ENST00000424011 CHL1O00533 1208 aa21.04■□□□□ 0.96
CMTM3-202ENST00000424011 RGS3P49796 1198 aa21.03■□□□□ 0.96
CMTM3-202ENST00000424011 LMOD2Q6P5Q4 547 aa21.03■□□□□ 0.96
CMTM3-202ENST00000424011 MCM10Q7L590 875 aa21.03■□□□□ 0.96
CMTM3-202ENST00000424011 TSPYL6Q8N831 410 aa21.01■□□□□ 0.95
CMTM3-202ENST00000424011 GCP02774 474 aa21.01■□□□□ 0.95
CMTM3-202ENST00000424011 MRPL50Q8N5N7 158 aaKnown RBP21.01■□□□□ 0.95
CMTM3-202ENST00000424011 PCDHB15Q9Y5E8 787 aa21.01■□□□□ 0.95
CMTM3-202ENST00000424011 USP19O94966 1318 aa21.01■□□□□ 0.95
CMTM3-202ENST00000424011 KIAA0232Q92628 1395 aa21.01■□□□□ 0.95
CMTM3-202ENST00000424011 SLIT3O75094 1523 aa21■□□□□ 0.95
CMTM3-202ENST00000424011 LTV1Q96GA3 475 aaPredicted RBP21■□□□□ 0.95
CMTM3-202ENST00000424011 CHMP4BQ9H444 224 aaKnown RBP21■□□□□ 0.95
CMTM3-202ENST00000424011 RWDD1Q9H446 243 aaPredicted RBP21■□□□□ 0.95
CMTM3-202ENST00000424011 PHRF1Q9P1Y6 1649 aaKnown RBP21■□□□□ 0.95
CMTM3-202ENST00000424011 ITPRIPQ8IWB1 547 aa21■□□□□ 0.95
CMTM3-202ENST00000424011 C8orf58Q8NAV2 365 aa21■□□□□ 0.95
CMTM3-202ENST00000424011 CRB1P82279 1406 aa21■□□□□ 0.95
CMTM3-202ENST00000424011 LTN1O94822 1766 aa20.99■□□□□ 0.95
CMTM3-202ENST00000424011 PXDNQ92626 1479 aa20.99■□□□□ 0.95
CMTM3-202ENST00000424011 GNAT3A8MTJ3 354 aa20.98■□□□□ 0.95
CMTM3-202ENST00000424011 ELL2O00472 640 aaPredicted RBP20.98■□□□□ 0.95
CMTM3-202ENST00000424011 FAM161AQ3B820 660 aa20.98■□□□□ 0.95
CMTM3-202ENST00000424011 C8orf34Q49A92 452 aa20.98■□□□□ 0.95
CMTM3-202ENST00000424011 ALS2Q96Q42 1657 aa20.98■□□□□ 0.95
CMTM3-202ENST00000424011 USP35Q9P2H5 1018 aa20.98■□□□□ 0.95
CMTM3-202ENST00000424011 ARHGEF25Q86VW2 580 aa20.97■□□□□ 0.95
CMTM3-202ENST00000424011 SPATA31A3Q5VYP0 1347 aa20.97■□□□□ 0.95
CMTM3-202ENST00000424011 TMEM57Q8N5G2 664 aa20.96■□□□□ 0.95
CMTM3-202ENST00000424011 TNS3Q68CZ2 1445 aa20.95■□□□□ 0.94
CMTM3-202ENST00000424011 LTBP4Q8N2S1 1624 aa20.95■□□□□ 0.94
CMTM3-202ENST00000424011 API5Q9BZZ5 524 aaKnown RBP20.95■□□□□ 0.94
CMTM3-202ENST00000424011 MAP3K5Q99683 1374 aa20.95■□□□□ 0.94
CMTM3-202ENST00000424011 SOS2Q07890 1332 aaPredicted RBP20.94■□□□□ 0.94
CMTM3-202ENST00000424011 ZBTB7CA1YPR0 619 aa20.94■□□□□ 0.94
CMTM3-202ENST00000424011 PLEKHG5O94827 1062 aa20.94■□□□□ 0.94
CMTM3-202ENST00000424011 BABAM1Q9NWV8 329 aa20.93■□□□□ 0.94
CMTM3-202ENST00000424011 TSPYL4Q9UJ04 414 aa20.93■□□□□ 0.94
CMTM3-202ENST00000424011 NBPF6Q5VWK0 638 aa20.92■□□□□ 0.94
CMTM3-202ENST00000424011 NBPF4Q96M43 638 aa20.92■□□□□ 0.94
CMTM3-202ENST00000424011 ZBTB40Q9NUA8 1239 aa20.92■□□□□ 0.94
CMTM3-202ENST00000424011 MED1Q15648 1581 aaPredicted RBP20.91■□□□□ 0.94
CMTM3-202ENST00000424011 HDAC1Q13547 482 aaPredicted RBP20.91■□□□□ 0.94
CMTM3-202ENST00000424011 ABCC4O15439 1325 aa20.9■□□□□ 0.94
CMTM3-202ENST00000424011 USHBP1Q8N6Y0 703 aa20.89■□□□□ 0.94
CMTM3-202ENST00000424011 SOS1Q07889 1333 aaPredicted RBP20.89■□□□□ 0.93
CMTM3-202ENST00000424011 LRRC37A3O60309 1634 aa20.88■□□□□ 0.93
CMTM3-202ENST00000424011 AMOTQ4VCS5 1084 aa20.88■□□□□ 0.93
CMTM3-202ENST00000424011 ZC3H6P61129 1189 aaKnown RBP20.87■□□□□ 0.93
CMTM3-202ENST00000424011 CABLES1Q8TDN4 633 aa20.87■□□□□ 0.93
CMTM3-202ENST00000424011 ANKRD24Q8TF21 1146 aa20.87■□□□□ 0.93
CMTM3-202ENST00000424011 PDZRN3Q9UPQ7 1066 aa20.87■□□□□ 0.93
CMTM3-202ENST00000424011 PTPRCP08575 1304 aa20.87■□□□□ 0.93
CMTM3-202ENST00000424011 NCAPD2Q15021 1401 aa20.87■□□□□ 0.93
CMTM3-202ENST00000424011 TAF7Q15545 349 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-202ENST00000424011 PLEKHO1Q53GL0 409 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-202ENST00000424011 ZBTB7BO15156 539 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-202ENST00000424011 KRT24Q2M2I5 525 aa20.86■□□□□ 0.93
CMTM3-202ENST00000424011 IL17REQ8NFR9 667 aa20.86■□□□□ 0.93
CMTM3-202ENST00000424011 MIS18AQ9NYP9 233 aa20.86■□□□□ 0.93
CMTM3-202ENST00000424011 EIF5BO60841 1220 aaKnown RBP20.85■□□□□ 0.93
CMTM3-202ENST00000424011 AXIN2Q9Y2T1 843 aa20.85■□□□□ 0.93
CMTM3-202ENST00000424011 LRRC59Q96AG4 307 aaKnown RBP20.84■□□□□ 0.93
CMTM3-202ENST00000424011 AKAP4Q5JQC9 854 aa20.83■□□□□ 0.92
CMTM3-202ENST00000424011 NHSL1Q5SYE7 1610 aa20.83■□□□□ 0.92
CMTM3-202ENST00000424011 CEMIPQ8WUJ3 1361 aa20.82■□□□□ 0.92
CMTM3-202ENST00000424011 INTS3Q68E01 1043 aaKnown RBP20.81■□□□□ 0.92
CMTM3-202ENST00000424011 ERBB3P21860 1342 aa20.81■□□□□ 0.92
CMTM3-202ENST00000424011 SLC4A2P04920 1241 aa20.81■□□□□ 0.92
CMTM3-202ENST00000424011 DDRGK1Q96HY6 314 aa20.81■□□□□ 0.92
CMTM3-202ENST00000424011 STK31Q9BXU1 1019 aa20.81■□□□□ 0.92
CMTM3-202ENST00000424011 C1orf141Q5JVX7 400 aa20.8■□□□□ 0.92
CMTM3-202ENST00000424011 CCDC30Q5VVM6 783 aa20.8■□□□□ 0.92
CMTM3-202ENST00000424011 ZNF530Q6P9A1 599 aaPredicted RBP20.8■□□□□ 0.92
CMTM3-202ENST00000424011 SMC5Q8IY18 1101 aa20.8■□□□□ 0.92
CMTM3-202ENST00000424011 PKNOX2Q96KN3 472 aa20.8■□□□□ 0.92
CMTM3-202ENST00000424011 CHMP4AQ9BY43 222 aa20.8■□□□□ 0.92
CMTM3-202ENST00000424011 CPDO75976 1380 aa20.8■□□□□ 0.92
CMTM3-202ENST00000424011 CRYBG1Q9Y4K1 1723 aa20.8■□□□□ 0.92
CMTM3-202ENST00000424011 CAMTA1Q9Y6Y1 1673 aa20.8■□□□□ 0.92
CMTM3-202ENST00000424011 VIRMAQ69YN4 1812 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms