RNA–Protein interactions for RNA: ENST00000423717.1

EPDR1-202, Transcript of ependymin related 1, humanhuman

TSL 1 (best) BASIC

Gene EPDR1, Length 638 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-202ENST00000423717 AEBP1Q8IUX7 1158 aa30.44■■■□□ 2.46
EPDR1-202ENST00000423717 NCAPD2Q15021 1401 aa30.44■■■□□ 2.46
EPDR1-202ENST00000423717 HMOX1P09601 288 aa30.43■■■□□ 2.46
EPDR1-202ENST00000423717 CCDC125Q86Z20 511 aa30.42■■■□□ 2.46
EPDR1-202ENST00000423717 COL3A1P02461 1466 aaPredicted RBP30.42■■■□□ 2.46
EPDR1-202ENST00000423717 RGPD1P0DJD0 1748 aa30.42■■■□□ 2.46
EPDR1-202ENST00000423717 SPG7Q9UQ90 795 aa30.41■■■□□ 2.46
EPDR1-202ENST00000423717 NUDCQ9Y266 331 aa30.4■■■□□ 2.46
EPDR1-202ENST00000423717 SHANK3Q9BYB0 1731 aa30.39■■■□□ 2.46
EPDR1-202ENST00000423717 KAT6BQ8WYB5 2073 aa30.39■■■□□ 2.46
EPDR1-202ENST00000423717 ACSBG1Q96GR2 724 aa30.39■■■□□ 2.46
EPDR1-202ENST00000423717 MYBBP1AQ9BQG0 1328 aaKnown RBP30.38■■■□□ 2.45
EPDR1-202ENST00000423717 PCDH11XQ9BZA7 1347 aa30.38■■■□□ 2.45
EPDR1-202ENST00000423717 PCDH11YQ9BZA8 1340 aa30.38■■■□□ 2.45
EPDR1-202ENST00000423717 PRKRIP1Q9H875 184 aaPredicted RBP30.37■■■□□ 2.45
EPDR1-202ENST00000423717 SBF2Q86WG5 1849 aa30.36■■■□□ 2.45
EPDR1-202ENST00000423717 PKD1L3Q7Z443 1732 aa30.36■■■□□ 2.45
EPDR1-202ENST00000423717 PLEKHO1Q53GL0 409 aaPredicted RBP30.35■■■□□ 2.45
EPDR1-202ENST00000423717 APBA3O96018 575 aa30.34■■■□□ 2.45
EPDR1-202ENST00000423717 EP400Q96L91 3159 aa30.33■■■□□ 2.45
EPDR1-202ENST00000423717 U2AF1L5P0DN76 240 aaPredicted RBP30.33■■■□□ 2.45
EPDR1-202ENST00000423717 BAG6P46379 1132 aa30.33■■■□□ 2.45
EPDR1-202ENST00000423717 U2AF1Q01081 240 aaKnown RBP eCLIP30.33■■■□□ 2.45
EPDR1-202ENST00000423717 DEFB132Q7Z7B7 95 aa30.33■■■□□ 2.45
EPDR1-202ENST00000423717 KDRP35968 1356 aa30.31■■■□□ 2.44
EPDR1-202ENST00000423717 TNS1Q9HBL0 1735 aaKnown RBP30.31■■■□□ 2.44
EPDR1-202ENST00000423717 CYP27B1O15528 508 aa30.31■■■□□ 2.44
EPDR1-202ENST00000423717 SYTL4Q96C24 671 aaPredicted RBP30.31■■■□□ 2.44
EPDR1-202ENST00000423717 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.31■■■□□ 2.44
EPDR1-202ENST00000423717 ANP32CO43423 234 aa30.29■■■□□ 2.44
EPDR1-202ENST00000423717 KCNQ2O43526 872 aa30.29■■■□□ 2.44
EPDR1-202ENST00000423717 AMOTQ4VCS5 1084 aa30.29■■■□□ 2.44
EPDR1-202ENST00000423717 ZNF530Q6P9A1 599 aaPredicted RBP30.29■■■□□ 2.44
EPDR1-202ENST00000423717 PTF1AQ7RTS3 328 aa30.29■■■□□ 2.44
EPDR1-202ENST00000423717 BCL9O00512 1426 aa30.29■■■□□ 2.44
EPDR1-202ENST00000423717 IFNL2Q8IZJ0 200 aa30.28■■■□□ 2.44
EPDR1-202ENST00000423717 BCL11BQ9C0K0 894 aaPredicted RBP30.28■■■□□ 2.44
EPDR1-202ENST00000423717 DOT1LQ8TEK3 1739 aa30.27■■■□□ 2.44
EPDR1-202ENST00000423717 EN1Q05925 392 aaPredicted RBP30.27■■■□□ 2.44
EPDR1-202ENST00000423717 PHKG2P15735 406 aa30.25■■■□□ 2.43
EPDR1-202ENST00000423717 C1orf141Q5JVX7 400 aa30.25■■■□□ 2.43
EPDR1-202ENST00000423717 NHSQ6T4R5 1651 aa30.25■■■□□ 2.43
EPDR1-202ENST00000423717 PRIM1P49642 420 aaKnown RBP30.24■■■□□ 2.43
EPDR1-202ENST00000423717 PRKAR2BP31323 418 aa30.23■■■□□ 2.43
EPDR1-202ENST00000423717 PLEKHG2Q9H7P9 1386 aa30.23■■■□□ 2.43
EPDR1-202ENST00000423717 EZH2Q15910 746 aaKnown RBP30.2■■■□□ 2.43
EPDR1-202ENST00000423717 RSPH6AQ9H0K4 717 aa30.2■■■□□ 2.43
EPDR1-202ENST00000423717 MTHFSDQ2M296 383 aaKnown RBP30.19■■■□□ 2.42
EPDR1-202ENST00000423717 BTAF1O14981 1849 aa30.18■■■□□ 2.42
EPDR1-202ENST00000423717 HSP90AB1P08238 724 aaKnown RBP30.18■■■□□ 2.42
EPDR1-202ENST00000423717 NKX1-1Q15270 411 aaPredicted RBP30.18■■■□□ 2.42
EPDR1-202ENST00000423717 FCHSD2O94868 740 aa30.17■■■□□ 2.42
EPDR1-202ENST00000423717 MPRIPQ6WCQ1 1025 aa30.17■■■□□ 2.42
EPDR1-202ENST00000423717 NEFMP07197 916 aa30.16■■■□□ 2.42
EPDR1-202ENST00000423717 WDR43Q15061 677 aaKnown RBP eCLIP30.16■■■□□ 2.42
EPDR1-202ENST00000423717 TOGARAM1Q9Y4F4 1720 aa30.16■■■□□ 2.42
EPDR1-202ENST00000423717 AKAP4Q5JQC9 854 aa30.15■■■□□ 2.42
EPDR1-202ENST00000423717 PHACTR3Q96KR7 559 aa30.14■■■□□ 2.42
EPDR1-202ENST00000423717 CAMKK2Q96RR4 588 aa30.14■■■□□ 2.42
EPDR1-202ENST00000423717 ITGB4P16144 1822 aa30.14■■■□□ 2.42
EPDR1-202ENST00000423717 GAS2L2Q8NHY3 880 aa30.13■■■□□ 2.41
EPDR1-202ENST00000423717 DCAF5Q96JK2 942 aa30.13■■■□□ 2.41
EPDR1-202ENST00000423717 PLSCR1O15162 318 aa30.12■■■□□ 2.41
EPDR1-202ENST00000423717 PNNQ9H307 717 aaKnown RBP30.11■■■□□ 2.41
EPDR1-202ENST00000423717 TMOD3Q9NYL9 352 aa30.11■■■□□ 2.41
EPDR1-202ENST00000423717 MAPK8IP3Q9UPT6 1336 aa30.08■■■□□ 2.41
EPDR1-202ENST00000423717 CABP4P57796 275 aa30.08■■■□□ 2.41
EPDR1-202ENST00000423717 KDM6AO15550 1401 aaPredicted RBP30.07■■■□□ 2.4
EPDR1-202ENST00000423717 CCDC184Q52MB2 194 aa30.07■■■□□ 2.4
EPDR1-202ENST00000423717 PIGBQ92521 554 aa30.07■■■□□ 2.4
EPDR1-202ENST00000423717 ERVV-2B6SEH9 535 aa30.06■■■□□ 2.4
EPDR1-202ENST00000423717 VIRMAQ69YN4 1812 aaKnown RBP30.06■■■□□ 2.4
EPDR1-202ENST00000423717 RGPD3A6NKT7 1758 aaPredicted RBP30.05■■■□□ 2.4
EPDR1-202ENST00000423717 RGPD4Q7Z3J3 1758 aa30.05■■■□□ 2.4
EPDR1-202ENST00000423717 GNAT3A8MTJ3 354 aa30.05■■■□□ 2.4
EPDR1-202ENST00000423717 TXNRD1Q16881 649 aa30.05■■■□□ 2.4
EPDR1-202ENST00000423717 LGR6Q9HBX8 967 aa30.05■■■□□ 2.4
EPDR1-202ENST00000423717 MRS2Q9HD23 443 aa30.05■■■□□ 2.4
EPDR1-202ENST00000423717 SCN11AQ9UI33 1791 aa30.05■■■□□ 2.4
EPDR1-202ENST00000423717 MAP3K5Q99683 1374 aa30.04■■■□□ 2.4
EPDR1-202ENST00000423717 RNMTO43148 476 aaKnown RBP30.03■■■□□ 2.4
EPDR1-202ENST00000423717 CCDC146Q8IYE0 955 aa30.03■■■□□ 2.4
EPDR1-202ENST00000423717 RREB1Q92766 1687 aa30.03■■■□□ 2.4
EPDR1-202ENST00000423717 PLEKHF1Q96S99 279 aa30.02■■■□□ 2.4
EPDR1-202ENST00000423717 ADAMTS8Q9UP79 889 aa30.02■■■□□ 2.4
EPDR1-202ENST00000423717 PROM2Q8N271 834 aa30.01■■■□□ 2.39
EPDR1-202ENST00000423717 NFATC2IPQ8NCF5 419 aa30.01■■■□□ 2.39
EPDR1-202ENST00000423717 NUP188Q5SRE5 1749 aa30.01■■■□□ 2.39
EPDR1-202ENST00000423717 RTF1Q92541 710 aaKnown RBP30■■■□□ 2.39
EPDR1-202ENST00000423717 NBPF14Q5TI25 921 aa29.99■■■□□ 2.39
EPDR1-202ENST00000423717 SMARCC1Q92922 1105 aaPredicted RBP29.99■■■□□ 2.39
EPDR1-202ENST00000423717 ASAP1Q9ULH1 1129 aa29.98■■■□□ 2.39
EPDR1-202ENST00000423717 PALLDQ8WX93 1383 aa29.98■■■□□ 2.39
EPDR1-202ENST00000423717 KCNQ4P56696 695 aa29.97■■■□□ 2.39
EPDR1-202ENST00000423717 SLC52A2Q9HAB3 445 aa29.97■■■□□ 2.39
EPDR1-202ENST00000423717 TEFQ10587 303 aa29.96■■■□□ 2.39
EPDR1-202ENST00000423717 CCNL1Q9UK58 526 aaPredicted RBP29.96■■■□□ 2.39
EPDR1-202ENST00000423717 NFE2L2Q16236 605 aa29.95■■■□□ 2.39
EPDR1-202ENST00000423717 DIEXFQ68CQ4 756 aaKnown RBP29.95■■■□□ 2.39
EPDR1-202ENST00000423717 IL17REQ8NFR9 667 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms