RNA–Protein interactions for RNA: ENST00000423693.5

HDLBP-210, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-210ENST00000423693 MEGF6O75095 1541 aa17.38■□□□□ 0.37
HDLBP-210ENST00000423693 MARCH10Q8NA82 808 aaPredicted RBP17.38■□□□□ 0.37
HDLBP-210ENST00000423693 UPF1Q92900 1129 aaKnown RBP eCLIP17.38■□□□□ 0.37
HDLBP-210ENST00000423693 KDRP35968 1356 aa17.38■□□□□ 0.37
HDLBP-210ENST00000423693 RGPD1P0DJD0 1748 aa17.36■□□□□ 0.37
HDLBP-210ENST00000423693 SULT6B1Q6IMI4 303 aa17.36■□□□□ 0.37
HDLBP-210ENST00000423693 SPG7Q9UQ90 795 aa17.36■□□□□ 0.37
HDLBP-210ENST00000423693 AMOTQ4VCS5 1084 aa17.35■□□□□ 0.37
HDLBP-210ENST00000423693 PCDH11XQ9BZA7 1347 aa17.35■□□□□ 0.37
HDLBP-210ENST00000423693 PCDH11YQ9BZA8 1340 aa17.35■□□□□ 0.37
HDLBP-210ENST00000423693 FAM182BQ5T319 152 aa17.34■□□□□ 0.37
HDLBP-210ENST00000423693 DDX54Q8TDD1 881 aaKnown RBP17.34■□□□□ 0.37
HDLBP-210ENST00000423693 U2SURPO15042 1029 aaKnown RBP17.33■□□□□ 0.36
HDLBP-210ENST00000423693 PLEKHO1Q53GL0 409 aaPredicted RBP17.33■□□□□ 0.36
HDLBP-210ENST00000423693 AEBP1Q8IUX7 1158 aa17.33■□□□□ 0.36
HDLBP-210ENST00000423693 ANP32CO43423 234 aa17.32■□□□□ 0.36
HDLBP-210ENST00000423693 SF3B2Q13435 895 aaKnown RBP17.32■□□□□ 0.36
HDLBP-210ENST00000423693 FCHSD2O94868 740 aa17.3■□□□□ 0.36
HDLBP-210ENST00000423693 HMOX1P09601 288 aa17.3■□□□□ 0.36
HDLBP-210ENST00000423693 NKX1-1Q15270 411 aaPredicted RBP17.3■□□□□ 0.36
HDLBP-210ENST00000423693 IFNL2Q8IZJ0 200 aa17.3■□□□□ 0.36
HDLBP-210ENST00000423693 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
HDLBP-210ENST00000423693 PKD1L3Q7Z443 1732 aa17.3■□□□□ 0.36
HDLBP-210ENST00000423693 CYP27B1O15528 508 aa17.29■□□□□ 0.36
HDLBP-210ENST00000423693 U2AF1L5P0DN76 240 aaPredicted RBP17.29■□□□□ 0.36
HDLBP-210ENST00000423693 U2AF1Q01081 240 aaKnown RBP eCLIP17.29■□□□□ 0.36
HDLBP-210ENST00000423693 TRIM37O94972 964 aa17.28■□□□□ 0.36
HDLBP-210ENST00000423693 HSP90AB1P08238 724 aaKnown RBP17.28■□□□□ 0.36
HDLBP-210ENST00000423693 PNNQ9H307 717 aaKnown RBP17.28■□□□□ 0.36
HDLBP-210ENST00000423693 SHANK3Q9BYB0 1731 aa17.27■□□□□ 0.36
HDLBP-210ENST00000423693 PHKG2P15735 406 aa17.27■□□□□ 0.36
HDLBP-210ENST00000423693 BAG6P46379 1132 aa17.26■□□□□ 0.35
HDLBP-210ENST00000423693 RSPH6AQ9H0K4 717 aa17.26■□□□□ 0.35
HDLBP-210ENST00000423693 C1orf141Q5JVX7 400 aa17.25■□□□□ 0.35
HDLBP-210ENST00000423693 ZNF530Q6P9A1 599 aaPredicted RBP17.25■□□□□ 0.35
HDLBP-210ENST00000423693 DCAF5Q96JK2 942 aa17.24■□□□□ 0.35
HDLBP-210ENST00000423693 SBF2Q86WG5 1849 aa17.24■□□□□ 0.35
HDLBP-210ENST00000423693 PLSCR1O15162 318 aa17.23■□□□□ 0.35
HDLBP-210ENST00000423693 APBA3O96018 575 aa17.23■□□□□ 0.35
HDLBP-210ENST00000423693 PRKAR2BP31323 418 aa17.23■□□□□ 0.35
HDLBP-210ENST00000423693 AKAP4Q5JQC9 854 aa17.23■□□□□ 0.35
HDLBP-210ENST00000423693 GAS2L2Q8NHY3 880 aa17.23■□□□□ 0.35
HDLBP-210ENST00000423693 KCNQ2O43526 872 aa17.22■□□□□ 0.35
HDLBP-210ENST00000423693 NEFMP07197 916 aa17.22■□□□□ 0.35
HDLBP-210ENST00000423693 PRIM1P49642 420 aaKnown RBP17.22■□□□□ 0.35
HDLBP-210ENST00000423693 MTHFSDQ2M296 383 aaKnown RBP17.22■□□□□ 0.35
HDLBP-210ENST00000423693 ACSBG1Q96GR2 724 aa17.22■□□□□ 0.35
HDLBP-210ENST00000423693 NHSQ6T4R5 1651 aa17.21■□□□□ 0.35
HDLBP-210ENST00000423693 ERVV-2B6SEH9 535 aa17.21■□□□□ 0.35
HDLBP-210ENST00000423693 WDR43Q15061 677 aaKnown RBP eCLIP17.2■□□□□ 0.34
HDLBP-210ENST00000423693 PHACTR3Q96KR7 559 aa17.2■□□□□ 0.34
HDLBP-210ENST00000423693 TNS1Q9HBL0 1735 aaKnown RBP17.2■□□□□ 0.34
HDLBP-210ENST00000423693 EP400Q96L91 3159 aa17.2■□□□□ 0.34
HDLBP-210ENST00000423693 SYTL4Q96C24 671 aaPredicted RBP17.19■□□□□ 0.34
HDLBP-210ENST00000423693 CAMKK2Q96RR4 588 aa17.19■□□□□ 0.34
HDLBP-210ENST00000423693 PLEKHF1Q96S99 279 aa17.19■□□□□ 0.34
HDLBP-210ENST00000423693 EN1Q05925 392 aaPredicted RBP17.18■□□□□ 0.34
HDLBP-210ENST00000423693 PTF1AQ7RTS3 328 aa17.18■□□□□ 0.34
HDLBP-210ENST00000423693 DEFB132Q7Z7B7 95 aa17.18■□□□□ 0.34
HDLBP-210ENST00000423693 GNAT3A8MTJ3 354 aa17.17■□□□□ 0.34
HDLBP-210ENST00000423693 DOT1LQ8TEK3 1739 aa17.16■□□□□ 0.34
HDLBP-210ENST00000423693 KAT6BQ8WYB5 2073 aa17.16■□□□□ 0.34
HDLBP-210ENST00000423693 HTATSF1O43719 755 aaKnown RBP17.16■□□□□ 0.34
HDLBP-210ENST00000423693 MPRIPQ6WCQ1 1025 aa17.16■□□□□ 0.34
HDLBP-210ENST00000423693 TMOD3Q9NYL9 352 aa17.16■□□□□ 0.34
HDLBP-210ENST00000423693 MAPK8IP3Q9UPT6 1336 aa17.16■□□□□ 0.34
HDLBP-210ENST00000423693 RGPD3A6NKT7 1758 aaPredicted RBP17.15■□□□□ 0.34
HDLBP-210ENST00000423693 RGPD4Q7Z3J3 1758 aa17.15■□□□□ 0.34
HDLBP-210ENST00000423693 KDM6AO15550 1401 aaPredicted RBP17.15■□□□□ 0.34
HDLBP-210ENST00000423693 HMGB2P26583 209 aaKnown RBP17.15■□□□□ 0.34
HDLBP-210ENST00000423693 PIGBQ92521 554 aa17.15■□□□□ 0.34
HDLBP-210ENST00000423693 SMARCC1Q92922 1105 aaPredicted RBP17.15■□□□□ 0.34
HDLBP-210ENST00000423693 MRS2Q9HD23 443 aa17.15■□□□□ 0.34
HDLBP-210ENST00000423693 ADAMTS8Q9UP79 889 aa17.15■□□□□ 0.34
HDLBP-210ENST00000423693 MAP3K5Q99683 1374 aa17.15■□□□□ 0.34
HDLBP-210ENST00000423693 CABP4P57796 275 aa17.14■□□□□ 0.33
HDLBP-210ENST00000423693 EZH2Q15910 746 aaKnown RBP17.14■□□□□ 0.33
HDLBP-210ENST00000423693 BTAF1O14981 1849 aa17.13■□□□□ 0.33
HDLBP-210ENST00000423693 RNMTO43148 476 aaKnown RBP17.13■□□□□ 0.33
HDLBP-210ENST00000423693 DIEXFQ68CQ4 756 aaKnown RBP17.13■□□□□ 0.33
HDLBP-210ENST00000423693 PNISRQ8TF01 805 aaKnown RBP17.13■□□□□ 0.33
HDLBP-210ENST00000423693 RUNDC1Q96C34 613 aa17.13■□□□□ 0.33
HDLBP-210ENST00000423693 TOGARAM1Q9Y4F4 1720 aa17.13■□□□□ 0.33
HDLBP-210ENST00000423693 NFE2L2Q16236 605 aa17.12■□□□□ 0.33
HDLBP-210ENST00000423693 CCDC184Q52MB2 194 aa17.12■□□□□ 0.33
HDLBP-210ENST00000423693 SLC27A3Q5K4L6 730 aa17.12■□□□□ 0.33
HDLBP-210ENST00000423693 RTF1Q92541 710 aaKnown RBP17.12■□□□□ 0.33
HDLBP-210ENST00000423693 TXNRD1Q16881 649 aa17.11■□□□□ 0.33
HDLBP-210ENST00000423693 PROM2Q8N271 834 aa17.11■□□□□ 0.33
HDLBP-210ENST00000423693 NFATC2IPQ8NCF5 419 aa17.11■□□□□ 0.33
HDLBP-210ENST00000423693 SLC52A2Q9HAB3 445 aa17.11■□□□□ 0.33
HDLBP-210ENST00000423693 LGR6Q9HBX8 967 aa17.11■□□□□ 0.33
HDLBP-210ENST00000423693 ITGB4P16144 1822 aa17.11■□□□□ 0.33
HDLBP-210ENST00000423693 ADAMTS7Q9UKP4 1686 aa17.1■□□□□ 0.33
HDLBP-210ENST00000423693 SCN11AQ9UI33 1791 aa17.1■□□□□ 0.33
HDLBP-210ENST00000423693 IL17REQ8NFR9 667 aa17.1■□□□□ 0.33
HDLBP-210ENST00000423693 CEMIPQ8WUJ3 1361 aa17.1■□□□□ 0.33
HDLBP-210ENST00000423693 CCER2I3L3R5 266 aa17.09■□□□□ 0.33
HDLBP-210ENST00000423693 MRC1P22897 1456 aa17.09■□□□□ 0.33
HDLBP-210ENST00000423693 PALLDQ8WX93 1383 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms