RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 FLT4P35916 1363 aa25.69■■□□□ 1.7
SREBF1-206ENST00000423161 LY75O60449 1722 aa25.69■■□□□ 1.7
SREBF1-206ENST00000423161 USHBP1Q8N6Y0 703 aa25.69■■□□□ 1.7
SREBF1-206ENST00000423161 ATF5Q9Y2D1 282 aaPredicted RBP25.69■■□□□ 1.7
SREBF1-206ENST00000423161 QSER1Q2KHR3 1735 aa25.68■■□□□ 1.7
SREBF1-206ENST00000423161 SYTL4Q96C24 671 aaPredicted RBP25.68■■□□□ 1.7
SREBF1-206ENST00000423161 LRRC4BQ9NT99 713 aa25.68■■□□□ 1.7
SREBF1-206ENST00000423161 ANKRD26Q9UPS8 1709 aa25.68■■□□□ 1.7
SREBF1-206ENST00000423161 KIF24Q5T7B8 1368 aa25.68■■□□□ 1.7
SREBF1-206ENST00000423161 MAP2P11137 1827 aaKnown RBP25.67■■□□□ 1.7
SREBF1-206ENST00000423161 PTGER2P43116 358 aa25.67■■□□□ 1.7
SREBF1-206ENST00000423161 HSP90AB2PQ58FF8 381 aa25.67■■□□□ 1.7
SREBF1-206ENST00000423161 TUBGCP6Q96RT7 1819 aa25.66■■□□□ 1.7
SREBF1-206ENST00000423161 PRIM1P49642 420 aaKnown RBP25.66■■□□□ 1.7
SREBF1-206ENST00000423161 RAPGEF4Q8WZA2 1011 aa25.66■■□□□ 1.7
SREBF1-206ENST00000423161 CGNL1Q0VF96 1302 aa25.65■■□□□ 1.7
SREBF1-206ENST00000423161 ZNF827Q17R98 1081 aa25.65■■□□□ 1.7
SREBF1-206ENST00000423161 MTFR1LQ9H019 292 aa25.65■■□□□ 1.7
SREBF1-206ENST00000423161 SLC27A3Q5K4L6 730 aa25.64■■□□□ 1.7
SREBF1-206ENST00000423161 NSD2O96028 1365 aa25.64■■□□□ 1.69
SREBF1-206ENST00000423161 TATP17735 454 aaPredicted RBP25.63■■□□□ 1.69
SREBF1-206ENST00000423161 EMILIN1Q9Y6C2 1016 aa25.63■■□□□ 1.69
SREBF1-206ENST00000423161 DCAF8L1A6NGE4 600 aa25.62■■□□□ 1.69
SREBF1-206ENST00000423161 PKD1L3Q7Z443 1732 aa25.6■■□□□ 1.69
SREBF1-206ENST00000423161 POLR3GLQ9BT43 218 aa25.6■■□□□ 1.69
SREBF1-206ENST00000423161 AKT1S1Q96B36 256 aa25.59■■□□□ 1.69
SREBF1-206ENST00000423161 SGIP1Q9BQI5 828 aa25.59■■□□□ 1.69
SREBF1-206ENST00000423161 PCDH11XQ9BZA7 1347 aa25.59■■□□□ 1.69
SREBF1-206ENST00000423161 PCDH11YQ9BZA8 1340 aa25.59■■□□□ 1.69
SREBF1-206ENST00000423161 KCNQ4P56696 695 aa25.58■■□□□ 1.69
SREBF1-206ENST00000423161 ITGB4P16144 1822 aa25.58■■□□□ 1.68
SREBF1-206ENST00000423161 PPM1GO15355 546 aaPredicted RBP25.57■■□□□ 1.68
SREBF1-206ENST00000423161 YY1P25490 414 aa25.56■■□□□ 1.68
SREBF1-206ENST00000423161 FHDC1Q9C0D6 1143 aaPredicted RBP25.56■■□□□ 1.68
SREBF1-206ENST00000423161 TOGARAM1Q9Y4F4 1720 aa25.56■■□□□ 1.68
SREBF1-206ENST00000423161 COL24A1Q17RW2 1714 aa25.55■■□□□ 1.68
SREBF1-206ENST00000423161 EIF4G2P78344 907 aaKnown RBP eCLIP25.55■■□□□ 1.682e-7■■■■□ 25.1
SREBF1-206ENST00000423161 NCAPD2Q15021 1401 aa25.54■■□□□ 1.68
SREBF1-206ENST00000423161 C5P01031 1676 aa25.54■■□□□ 1.68
SREBF1-206ENST00000423161 HSPA5P11021 654 aaKnown RBP25.53■■□□□ 1.68
SREBF1-206ENST00000423161 CCER1Q8TC90 406 aaPredicted RBP25.53■■□□□ 1.68
SREBF1-206ENST00000423161 SYT17Q9BSW7 474 aa25.53■■□□□ 1.68
SREBF1-206ENST00000423161 TFCP2L1Q9NZI6 479 aa25.53■■□□□ 1.68
SREBF1-206ENST00000423161 CCNL1Q9UK58 526 aaPredicted RBP25.53■■□□□ 1.68
SREBF1-206ENST00000423161 PNPLA7Q6ZV29 1317 aa25.53■■□□□ 1.68
SREBF1-206ENST00000423161 TAF1LQ8IZX4 1826 aa25.53■■□□□ 1.68
SREBF1-206ENST00000423161 ARXQ96QS3 562 aa25.52■■□□□ 1.68
SREBF1-206ENST00000423161 WASHC2AQ641Q2 1341 aa25.52■■□□□ 1.68
SREBF1-206ENST00000423161 CYP27B1O15528 508 aa25.51■■□□□ 1.67
SREBF1-206ENST00000423161 SLC16A10Q8TF71 515 aa25.51■■□□□ 1.67
SREBF1-206ENST00000423161 POLKQ9UBT6 870 aa25.49■■□□□ 1.67
SREBF1-206ENST00000423161 TNNT2P45379 298 aaPredicted RBP25.47■■□□□ 1.67
SREBF1-206ENST00000423161 EYA1Q99502 592 aa25.47■■□□□ 1.67
SREBF1-206ENST00000423161 CHD4Q14839 1912 aa25.47■■□□□ 1.67
SREBF1-206ENST00000423161 MAP3K5Q99683 1374 aa25.46■■□□□ 1.67
SREBF1-206ENST00000423161 MPRIPQ6WCQ1 1025 aa25.46■■□□□ 1.67
SREBF1-206ENST00000423161 PALLDQ8WX93 1383 aa25.45■■□□□ 1.67
SREBF1-206ENST00000423161 POLD1P28340 1107 aa25.45■■□□□ 1.66
SREBF1-206ENST00000423161 SPG7Q9UQ90 795 aa25.45■■□□□ 1.66
SREBF1-206ENST00000423161 PANK3Q9H999 370 aa25.44■■□□□ 1.66
SREBF1-206ENST00000423161 C4BP0C0L5 1744 aa25.41■■□□□ 1.66
SREBF1-206ENST00000423161 MSH5O43196 834 aa25.41■■□□□ 1.66
SREBF1-206ENST00000423161 EIF4A2Q14240 407 aaKnown RBP25.41■■□□□ 1.66
SREBF1-206ENST00000423161 NKX1-1Q15270 411 aaPredicted RBP25.41■■□□□ 1.66
SREBF1-206ENST00000423161 KLHL34Q8N239 644 aa25.41■■□□□ 1.66
SREBF1-206ENST00000423161 SMARCC1Q92922 1105 aaPredicted RBP25.4■■□□□ 1.66
SREBF1-206ENST00000423161 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.4■■□□□ 1.66
SREBF1-206ENST00000423161 COL23A1Q86Y22 540 aaPredicted RBP25.39■■□□□ 1.66
SREBF1-206ENST00000423161 HMGB2P26583 209 aaKnown RBP25.38■■□□□ 1.65
SREBF1-206ENST00000423161 PIGBQ92521 554 aa25.38■■□□□ 1.65
SREBF1-206ENST00000423161 UBR3Q6ZT12 1888 aa25.38■■□□□ 1.65
SREBF1-206ENST00000423161 PLEKHG2Q9H7P9 1386 aa25.35■■□□□ 1.65
SREBF1-206ENST00000423161 PHKG2P15735 406 aa25.35■■□□□ 1.65
SREBF1-206ENST00000423161 IFNL2Q8IZJ0 200 aa25.35■■□□□ 1.65
SREBF1-206ENST00000423161 IGSF1Q8N6C5 1336 aa25.35■■□□□ 1.65
SREBF1-206ENST00000423161 TMOD3Q9NYL9 352 aa25.34■■□□□ 1.65
SREBF1-206ENST00000423161 MSL1Q68DK7 614 aa25.33■■□□□ 1.65
SREBF1-206ENST00000423161 MORC1Q86VD1 984 aa25.33■■□□□ 1.65
SREBF1-206ENST00000423161 FLAD1Q8NFF5 587 aa25.32■■□□□ 1.64
SREBF1-206ENST00000423161 AK7Q96M32 723 aa25.32■■□□□ 1.64
SREBF1-206ENST00000423161 GPR162Q16538 588 aa25.31■■□□□ 1.64
SREBF1-206ENST00000423161 KNSTRNQ9Y448 316 aa25.3■■□□□ 1.64
SREBF1-206ENST00000423161 LOC102724428A0A0B4J2F2 783 aa25.29■■□□□ 1.64
SREBF1-206ENST00000423161 SIK1P57059 783 aa25.29■■□□□ 1.64
SREBF1-206ENST00000423161 NLGN2Q8NFZ4 835 aa25.29■■□□□ 1.64
SREBF1-206ENST00000423161 ASAP1Q9ULH1 1129 aa25.29■■□□□ 1.64
SREBF1-206ENST00000423161 UTRNP46939 3433 aa25.28■■□□□ 1.64
SREBF1-206ENST00000423161 PELP1Q8IZL8 1130 aaKnown RBP25.27■■□□□ 1.64
SREBF1-206ENST00000423161 AMIGO3Q86WK7 504 aa25.26■■□□□ 1.63
SREBF1-206ENST00000423161 LINC00116Q8NCU8 138 aa25.26■■□□□ 1.63
SREBF1-206ENST00000423161 PHF14O94880 888 aa25.25■■□□□ 1.63
SREBF1-206ENST00000423161 PLEKHO1Q53GL0 409 aaPredicted RBP25.25■■□□□ 1.63
SREBF1-206ENST00000423161 ZNF784Q8NCA9 323 aaPredicted RBP25.25■■□□□ 1.63
SREBF1-206ENST00000423161 KIF7Q2M1P5 1343 aa25.25■■□□□ 1.63
SREBF1-206ENST00000423161 ZNF831Q5JPB2 1677 aa25.24■■□□□ 1.63
SREBF1-206ENST00000423161 ATG3Q9NT62 314 aa25.24■■□□□ 1.63
SREBF1-206ENST00000423161 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.23■■□□□ 1.63
SREBF1-206ENST00000423161 HSP90AB1P08238 724 aaKnown RBP25.23■■□□□ 1.63
SREBF1-206ENST00000423161 ATP6V1AP38606 617 aa25.23■■□□□ 1.63
SREBF1-206ENST00000423161 ITPK1Q13572 414 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms