RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-213ENST00000419582 ZNF526Q8TF50 670 aaPredicted RBP21.75■■□□□ 1.07
PTPA-213ENST00000419582 MSH5O43196 834 aa21.74■■□□□ 1.07
PTPA-213ENST00000419582 TOMM70O94826 608 aa21.74■■□□□ 1.07
PTPA-213ENST00000419582 SYTL4Q96C24 671 aaPredicted RBP21.74■■□□□ 1.07
PTPA-213ENST00000419582 IP6K1Q92551 441 aa21.73■■□□□ 1.07
PTPA-213ENST00000419582 MSL1Q68DK7 614 aa21.71■■□□□ 1.07
PTPA-213ENST00000419582 SBNO2Q9Y2G9 1366 aa21.71■■□□□ 1.07
PTPA-213ENST00000419582 ZCRB1Q8TBF4 217 aaKnown RBP21.7■■□□□ 1.06
PTPA-213ENST00000419582 USP47Q96K76 1375 aa21.7■■□□□ 1.06
PTPA-213ENST00000419582 PCNTO95613 3336 aa21.69■■□□□ 1.06
PTPA-213ENST00000419582 NME9Q86XW9 330 aa21.69■■□□□ 1.06
PTPA-213ENST00000419582 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.69■■□□□ 1.06
PTPA-213ENST00000419582 JMYQ8N9B5 988 aa21.68■■□□□ 1.06
PTPA-213ENST00000419582 IGSF1Q8N6C5 1336 aa21.68■■□□□ 1.06
PTPA-213ENST00000419582 MON2Q7Z3U7 1717 aa21.68■■□□□ 1.06
PTPA-213ENST00000419582 LTN1O94822 1766 aa21.66■■□□□ 1.06
PTPA-213ENST00000419582 CGNL1Q0VF96 1302 aa21.65■■□□□ 1.06
PTPA-213ENST00000419582 FAM208AQ9UK61 1670 aaKnown RBP21.65■■□□□ 1.06
PTPA-213ENST00000419582 CD163L1Q9NR16 1453 aa21.64■■□□□ 1.06
PTPA-213ENST00000419582 COL13A1Q5TAT6 717 aaPredicted RBP21.64■■□□□ 1.05
PTPA-213ENST00000419582 CICQ96RK0 1608 aaPredicted RBP21.64■■□□□ 1.05
PTPA-213ENST00000419582 DOT1LQ8TEK3 1739 aa21.63■■□□□ 1.05
PTPA-213ENST00000419582 EDC4Q6P2E9 1401 aaKnown RBP21.63■■□□□ 1.05
PTPA-213ENST00000419582 KLRG1Q96E93 195 aa21.62■■□□□ 1.05
PTPA-213ENST00000419582 PRELPP51888 382 aa21.61■■□□□ 1.05
PTPA-213ENST00000419582 RBM46Q8TBY0 533 aaKnown RBP21.61■■□□□ 1.05
PTPA-213ENST00000419582 HDGFL2Q7Z4V5 671 aaPredicted RBP21.6■■□□□ 1.05
PTPA-213ENST00000419582 NSD3Q9BZ95 1437 aa21.59■■□□□ 1.05
PTPA-213ENST00000419582 C5P01031 1676 aa21.58■■□□□ 1.05
PTPA-213ENST00000419582 MEGF6O75095 1541 aa21.57■■□□□ 1.04
PTPA-213ENST00000419582 HOXC9P31274 260 aa21.57■■□□□ 1.04
PTPA-213ENST00000419582 FSTL1Q12841 308 aa21.57■■□□□ 1.04
PTPA-213ENST00000419582 L3MBTL2Q969R5 705 aa21.57■■□□□ 1.04
PTPA-213ENST00000419582 LTV1Q96GA3 475 aaPredicted RBP21.57■■□□□ 1.04
PTPA-213ENST00000419582 PUS7Q96PZ0 661 aaKnown RBP21.57■■□□□ 1.04
PTPA-213ENST00000419582 SSFA2P28290 1259 aa21.56■■□□□ 1.04
PTPA-213ENST00000419582 SMARCC1Q92922 1105 aaPredicted RBP21.56■■□□□ 1.04
PTPA-213ENST00000419582 TERF2IPQ9NYB0 399 aa21.56■■□□□ 1.04
PTPA-213ENST00000419582 PALLDQ8WX93 1383 aa21.56■■□□□ 1.04
PTPA-213ENST00000419582 TGFB2P61812 414 aa21.55■■□□□ 1.04
PTPA-213ENST00000419582 AMIGO3Q86WK7 504 aa21.55■■□□□ 1.04
PTPA-213ENST00000419582 AK7Q96M32 723 aa21.55■■□□□ 1.04
PTPA-213ENST00000419582 MAP3K19Q56UN5 1328 aa21.55■■□□□ 1.04
PTPA-213ENST00000419582 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.54■■□□□ 1.04
PTPA-213ENST00000419582 SLC12A5Q9H2X9 1139 aa21.54■■□□□ 1.04
PTPA-213ENST00000419582 TAF1LQ8IZX4 1826 aa21.54■■□□□ 1.04
PTPA-213ENST00000419582 ROCK2O75116 1388 aaKnown RBP21.53■■□□□ 1.04
PTPA-213ENST00000419582 TNS4Q8IZW8 715 aa21.53■■□□□ 1.04
PTPA-213ENST00000419582 NBPF6Q5VWK0 638 aa21.52■■□□□ 1.04
PTPA-213ENST00000419582 NBPF4Q96M43 638 aa21.52■■□□□ 1.04
PTPA-213ENST00000419582 NMRK2Q9NPI5 230 aa21.52■■□□□ 1.04
PTPA-213ENST00000419582 C4BP0C0L5 1744 aa21.52■■□□□ 1.03
PTPA-213ENST00000419582 WDR90Q96KV7 1748 aa21.52■■□□□ 1.03
PTPA-213ENST00000419582 AMPHP49418 695 aa21.5■■□□□ 1.03
PTPA-213ENST00000419582 TMC1Q8TDI8 760 aa21.5■■□□□ 1.03
PTPA-213ENST00000419582 RAPGEF4Q8WZA2 1011 aa21.5■■□□□ 1.03
PTPA-213ENST00000419582 PCDH11XQ9BZA7 1347 aa21.5■■□□□ 1.03
PTPA-213ENST00000419582 PCDH11YQ9BZA8 1340 aa21.5■■□□□ 1.03
PTPA-213ENST00000419582 MPRIPQ6WCQ1 1025 aa21.49■■□□□ 1.03
PTPA-213ENST00000419582 WWC3Q9ULE0 1092 aa21.49■■□□□ 1.03
PTPA-213ENST00000419582 PXDNLA1KZ92 1463 aa21.49■■□□□ 1.03
PTPA-213ENST00000419582 A0A1W2PP64 1363 aa21.48■■□□□ 1.03
PTPA-213ENST00000419582 RTL1A6NKG5 1358 aa21.48■■□□□ 1.03
PTPA-213ENST00000419582 UBR3Q6ZT12 1888 aa21.48■■□□□ 1.03
PTPA-213ENST00000419582 COG3Q96JB2 828 aa21.48■■□□□ 1.03
PTPA-213ENST00000419582 TOGARAM1Q9Y4F4 1720 aa21.48■■□□□ 1.03
PTPA-213ENST00000419582 C10orf71Q711Q0 1435 aa21.47■■□□□ 1.03
PTPA-213ENST00000419582 TATP17735 454 aaPredicted RBP21.47■■□□□ 1.03
PTPA-213ENST00000419582 C16orf71Q8IYS4 520 aaPredicted RBP21.46■■□□□ 1.03
PTPA-213ENST00000419582 PLEKHG2Q9H7P9 1386 aa21.46■■□□□ 1.03
PTPA-213ENST00000419582 CAPN15O75808 1086 aa21.45■■□□□ 1.02
PTPA-213ENST00000419582 PHF14O94880 888 aa21.45■■□□□ 1.02
PTPA-213ENST00000419582 NKX1-1Q15270 411 aaPredicted RBP21.45■■□□□ 1.02
PTPA-213ENST00000419582 ARHGAP27Q6ZUM4 889 aa21.45■■□□□ 1.02
PTPA-213ENST00000419582 BCS1LQ9Y276 419 aa21.45■■□□□ 1.02
PTPA-213ENST00000419582 KIF13BQ9NQT8 1826 aa21.45■■□□□ 1.02
PTPA-213ENST00000419582 CYP27B1O15528 508 aa21.44■■□□□ 1.02
PTPA-213ENST00000419582 MMP10P09238 476 aa21.44■■□□□ 1.02
PTPA-213ENST00000419582 HTRA3P83110 453 aa21.44■■□□□ 1.02
PTPA-213ENST00000419582 LOC102724428A0A0B4J2F2 783 aa21.43■■□□□ 1.02
PTPA-213ENST00000419582 SIK1P57059 783 aa21.43■■□□□ 1.02
PTPA-213ENST00000419582 NLGN1Q8N2Q7 840 aa21.43■■□□□ 1.02
PTPA-213ENST00000419582 PIGBQ92521 554 aa21.43■■□□□ 1.02
PTPA-213ENST00000419582 A0A0G2JLW4 131 aa21.42■■□□□ 1.02
PTPA-213ENST00000419582 SMIM5Q71RC9 77 aa21.42■■□□□ 1.02
PTPA-213ENST00000419582 LINC00116Q8NCU8 138 aa21.42■■□□□ 1.02
PTPA-213ENST00000419582 KDM2BQ8NHM5 1336 aa21.42■■□□□ 1.02
PTPA-213ENST00000419582 RGPD2P0DJD1 1756 aa21.41■■□□□ 1.02
PTPA-213ENST00000419582 KIAA1551Q9HCM1 1747 aa21.41■■□□□ 1.02
PTPA-213ENST00000419582 FBLN1P23142 703 aa21.41■■□□□ 1.02
PTPA-213ENST00000419582 C9orf131Q5VYM1 1079 aa21.4■■□□□ 1.02
PTPA-213ENST00000419582 MAP2P11137 1827 aaKnown RBP21.39■■□□□ 1.02
PTPA-213ENST00000419582 SMG6Q86US8 1419 aaKnown RBP21.38■■□□□ 1.01
PTPA-213ENST00000419582 KIF24Q5T7B8 1368 aa21.38■■□□□ 1.01
PTPA-213ENST00000419582 FCHSD2O94868 740 aa21.38■■□□□ 1.01
PTPA-213ENST00000419582 KCNA3P22001 575 aa21.38■■□□□ 1.01
PTPA-213ENST00000419582 USHBP1Q8N6Y0 703 aa21.38■■□□□ 1.01
PTPA-213ENST00000419582 INSRP06213 1382 aa21.37■■□□□ 1.01
PTPA-213ENST00000419582 GNPATO15228 680 aa21.37■■□□□ 1.01
PTPA-213ENST00000419582 DPEP1P16444 411 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms