RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 NBPF4Q96M43 638 aa17.26■□□□□ 0.35
CCT6P3-201ENST00000419314 ARXQ96QS3 562 aa17.26■□□□□ 0.35
CCT6P3-201ENST00000419314 HMMRO75330 724 aa17.25■□□□□ 0.35
CCT6P3-201ENST00000419314 ZBTB7BO15156 539 aaPredicted RBP17.25■□□□□ 0.35
CCT6P3-201ENST00000419314 ZNF853P0CG23 659 aa17.25■□□□□ 0.35
CCT6P3-201ENST00000419314 ANXA1P04083 346 aa17.25■□□□□ 0.35
CCT6P3-201ENST00000419314 ARHGAP45Q92619 1136 aa17.25■□□□□ 0.35
CCT6P3-201ENST00000419314 C19orf44Q9H6X5 657 aa17.25■□□□□ 0.35
CCT6P3-201ENST00000419314 CDC42BPGQ6DT37 1551 aa17.25■□□□□ 0.35
CCT6P3-201ENST00000419314 HDAC1Q13547 482 aaPredicted RBP17.24■□□□□ 0.35
CCT6P3-201ENST00000419314 OS9Q13438 667 aaPredicted RBP17.24■□□□□ 0.35
CCT6P3-201ENST00000419314 ANKRD24Q8TF21 1146 aa17.24■□□□□ 0.35
CCT6P3-201ENST00000419314 IP6K1Q92551 441 aa17.24■□□□□ 0.35
CCT6P3-201ENST00000419314 USP32Q8NFA0 1604 aa17.24■□□□□ 0.35
CCT6P3-201ENST00000419314 MEIS3Q99687 375 aa17.24■□□□□ 0.35
CCT6P3-201ENST00000419314 SHPRHQ149N8 1683 aa17.23■□□□□ 0.35
CCT6P3-201ENST00000419314 MAP2P11137 1827 aaKnown RBP17.23■□□□□ 0.35
CCT6P3-201ENST00000419314 AIMP1Q12904 312 aaKnown RBP17.23■□□□□ 0.35
CCT6P3-201ENST00000419314 GCC1Q96CN9 775 aa17.23■□□□□ 0.35
CCT6P3-201ENST00000419314 SETD1BQ9UPS6 1966 aaKnown RBP17.23■□□□□ 0.35
CCT6P3-201ENST00000419314 SMARCA5O60264 1052 aaPredicted RBP17.22■□□□□ 0.35
CCT6P3-201ENST00000419314 BTBD11A6QL63 1104 aa17.22■□□□□ 0.35
CCT6P3-201ENST00000419314 LGR6Q9HBX8 967 aa17.22■□□□□ 0.35
CCT6P3-201ENST00000419314 C22orf23Q9BZE7 217 aa17.22■□□□□ 0.35
CCT6P3-201ENST00000419314 IL17REQ8NFR9 667 aa17.21■□□□□ 0.35
CCT6P3-201ENST00000419314 USP35Q9P2H5 1018 aa17.21■□□□□ 0.35
CCT6P3-201ENST00000419314 UBR1Q8IWV7 1749 aa17.21■□□□□ 0.34
CCT6P3-201ENST00000419314 FLIIQ13045 1269 aa17.2■□□□□ 0.34
CCT6P3-201ENST00000419314 NPHP4O75161 1426 aaPredicted RBP17.2■□□□□ 0.34
CCT6P3-201ENST00000419314 SMC5Q8IY18 1101 aa17.2■□□□□ 0.34
CCT6P3-201ENST00000419314 IGSF1Q8N6C5 1336 aa17.19■□□□□ 0.34
CCT6P3-201ENST00000419314 DEKP35659 375 aaKnown RBP17.19■□□□□ 0.34
CCT6P3-201ENST00000419314 OVOS2A0A0J9YW53 1432 aa17.19■□□□□ 0.34
CCT6P3-201ENST00000419314 OVOS2Q6IE36 1432 aa17.19■□□□□ 0.34
CCT6P3-201ENST00000419314 NRXN3Q9Y4C0 1643 aa17.19■□□□□ 0.34
CCT6P3-201ENST00000419314 FOXD4L1Q9NU39 408 aa17.19■□□□□ 0.34
CCT6P3-201ENST00000419314 EXOC6BQ9Y2D4 811 aa17.19■□□□□ 0.34
CCT6P3-201ENST00000419314 ZNF330Q9Y3S2 320 aaPredicted RBP17.19■□□□□ 0.34
CCT6P3-201ENST00000419314 CASC1Q6TDU7 716 aa17.18■□□□□ 0.34
CCT6P3-201ENST00000419314 HSCBQ8IWL3 235 aa17.18■□□□□ 0.34
CCT6P3-201ENST00000419314 ARHGEF10O15013 1369 aa17.18■□□□□ 0.34
CCT6P3-201ENST00000419314 PIK3R4Q99570 1358 aa17.18■□□□□ 0.34
CCT6P3-201ENST00000419314 CCT4P50991 539 aaKnown RBP17.18■□□□□ 0.34
CCT6P3-201ENST00000419314 NUCB1Q02818 461 aa17.18■□□□□ 0.34
CCT6P3-201ENST00000419314 PTCH1Q13635 1447 aa17.17■□□□□ 0.34
CCT6P3-201ENST00000419314 TRIM6-TRIM34B2RNG4 842 aa17.17■□□□□ 0.34
CCT6P3-201ENST00000419314 GNAI2P04899 355 aa17.17■□□□□ 0.34
CCT6P3-201ENST00000419314 DNAJC5Q9H3Z4 198 aa17.17■□□□□ 0.34
CCT6P3-201ENST00000419314 HSP90AB1P08238 724 aaKnown RBP17.17■□□□□ 0.34
CCT6P3-201ENST00000419314 UBTFL1P0CB47 393 aaPredicted RBP17.17■□□□□ 0.34
CCT6P3-201ENST00000419314 C16orf71Q8IYS4 520 aaPredicted RBP17.17■□□□□ 0.34
CCT6P3-201ENST00000419314 STRN4Q9NRL3 753 aa17.17■□□□□ 0.34
CCT6P3-201ENST00000419314 FER1L4A9Z1Z3 1794 aa17.16■□□□□ 0.34
CCT6P3-201ENST00000419314 USP31Q70CQ4 1352 aa17.16■□□□□ 0.34
CCT6P3-201ENST00000419314 TATP17735 454 aaPredicted RBP17.16■□□□□ 0.34
CCT6P3-201ENST00000419314 PRDM11Q9NQV5 511 aa17.16■□□□□ 0.34
CCT6P3-201ENST00000419314 MAP3K5Q99683 1374 aa17.15■□□□□ 0.34
CCT6P3-201ENST00000419314 PTPRCP08575 1304 aa17.15■□□□□ 0.34
CCT6P3-201ENST00000419314 EVA1CP58658 441 aa17.15■□□□□ 0.34
CCT6P3-201ENST00000419314 CADPS2Q86UW7 1296 aa17.15■□□□□ 0.34
CCT6P3-201ENST00000419314 C9orf78Q9NZ63 289 aaPredicted RBP17.15■□□□□ 0.34
CCT6P3-201ENST00000419314 KCNQ3O43525 872 aa17.15■□□□□ 0.34
CCT6P3-201ENST00000419314 RPAP2Q8IXW5 612 aaPredicted RBP17.15■□□□□ 0.34
CCT6P3-201ENST00000419314 GNAI3P08754 354 aa17.14■□□□□ 0.34
CCT6P3-201ENST00000419314 RILPL2Q969X0 211 aa17.14■□□□□ 0.34
CCT6P3-201ENST00000419314 PHAXQ9H814 394 aaKnown RBP17.14■□□□□ 0.34
CCT6P3-201ENST00000419314 ARHGAP23Q9P227 1491 aa17.14■□□□□ 0.33
CCT6P3-201ENST00000419314 KIF20BQ96Q89 1820 aa17.14■□□□□ 0.33
CCT6P3-201ENST00000419314 DIP2AQ14689 1571 aa17.14■□□□□ 0.33
CCT6P3-201ENST00000419314 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.14■□□□□ 0.33
CCT6P3-201ENST00000419314 C3P01024 1663 aa17.14■□□□□ 0.33
CCT6P3-201ENST00000419314 RIMS1Q86UR5 1692 aaKnown RBP17.14■□□□□ 0.33
CCT6P3-201ENST00000419314 SLC39A6Q13433 755 aa17.13■□□□□ 0.33
CCT6P3-201ENST00000419314 TTC5Q8N0Z6 440 aa17.13■□□□□ 0.33
CCT6P3-201ENST00000419314 ABCC4O15439 1325 aa17.13■□□□□ 0.33
CCT6P3-201ENST00000419314 SLIT1O75093 1534 aa17.12■□□□□ 0.33
CCT6P3-201ENST00000419314 HTATSF1O43719 755 aaKnown RBP17.12■□□□□ 0.33
CCT6P3-201ENST00000419314 MYL6BP14649 208 aa17.12■□□□□ 0.33
CCT6P3-201ENST00000419314 AMOTQ4VCS5 1084 aa17.12■□□□□ 0.33
CCT6P3-201ENST00000419314 TOM1L2Q6ZVM7 507 aa17.12■□□□□ 0.33
CCT6P3-201ENST00000419314 CHMP4AQ9BY43 222 aa17.12■□□□□ 0.33
CCT6P3-201ENST00000419314 SRCIN1Q9C0H9 1055 aa17.12■□□□□ 0.33
CCT6P3-201ENST00000419314 CHPF2Q9P2E5 772 aa17.12■□□□□ 0.33
CCT6P3-201ENST00000419314 TMEM94Q12767 1356 aa17.12■□□□□ 0.33
CCT6P3-201ENST00000419314 CEP170BQ9Y4F5 1589 aaPredicted RBP17.12■□□□□ 0.33
CCT6P3-201ENST00000419314 LRRFIP2Q9Y608 721 aaKnown RBP17.12■□□□□ 0.33
CCT6P3-201ENST00000419314 SURF6O75683 361 aaKnown RBP17.12■□□□□ 0.33
CCT6P3-201ENST00000419314 ANKARQ7Z5J8 1434 aa17.12■□□□□ 0.33
CCT6P3-201ENST00000419314 TSHZ3Q63HK5 1081 aa17.11■□□□□ 0.33
CCT6P3-201ENST00000419314 INTS3Q68E01 1043 aaKnown RBP17.11■□□□□ 0.33
CCT6P3-201ENST00000419314 MSH6P52701 1360 aa17.11■□□□□ 0.33
CCT6P3-201ENST00000419314 PI4KAP2A4QPH2 592 aa17.11■□□□□ 0.33
CCT6P3-201ENST00000419314 ARHGEF25Q86VW2 580 aa17.11■□□□□ 0.33
CCT6P3-201ENST00000419314 SIRT2Q8IXJ6 389 aa17.11■□□□□ 0.33
CCT6P3-201ENST00000419314 PI4KAP1Q8N8J0 262 aa17.11■□□□□ 0.33
CCT6P3-201ENST00000419314 IL1RAPL2Q9NP60 686 aa17.11■□□□□ 0.33
CCT6P3-201ENST00000419314 NFKBIBQ15653 356 aa17.11■□□□□ 0.33
CCT6P3-201ENST00000419314 DDX54Q8TDD1 881 aaKnown RBP17.11■□□□□ 0.33
CCT6P3-201ENST00000419314 ANKRD44Q8N8A2 993 aa17.1■□□□□ 0.33
CCT6P3-201ENST00000419314 AXIN2Q9Y2T1 843 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms