RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 PLEKHG2Q9H7P9 1386 aa24.62■■□□□ 1.53
SEMA3B-202ENST00000418576 CCER2I3L3R5 266 aa24.62■■□□□ 1.53
SEMA3B-202ENST00000418576 MIER1Q8N108 512 aa24.62■■□□□ 1.53
SEMA3B-202ENST00000418576 PNNQ9H307 717 aaKnown RBP24.62■■□□□ 1.53
SEMA3B-202ENST00000418576 OVOS2A0A0G2JMS6 1433 aa24.62■■□□□ 1.53
SEMA3B-202ENST00000418576 ZCRB1Q8TBF4 217 aaKnown RBP24.62■■□□□ 1.53
SEMA3B-202ENST00000418576 WNK3Q9BYP7 1800 aa24.61■■□□□ 1.53
SEMA3B-202ENST00000418576 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.61■■□□□ 1.53
SEMA3B-202ENST00000418576 SPG7Q9UQ90 795 aa24.61■■□□□ 1.53
SEMA3B-202ENST00000418576 PARP4Q9UKK3 1724 aaKnown RBP24.6■■□□□ 1.53
SEMA3B-202ENST00000418576 NEFMP07197 916 aa24.59■■□□□ 1.53
SEMA3B-202ENST00000418576 AMOTQ4VCS5 1084 aa24.59■■□□□ 1.53
SEMA3B-202ENST00000418576 PLEKHO1Q53GL0 409 aaPredicted RBP24.59■■□□□ 1.53
SEMA3B-202ENST00000418576 RSPH6AQ9H0K4 717 aa24.59■■□□□ 1.53
SEMA3B-202ENST00000418576 PRKAR2BP31323 418 aa24.59■■□□□ 1.53
SEMA3B-202ENST00000418576 KRT27Q7Z3Y8 459 aa24.59■■□□□ 1.53
SEMA3B-202ENST00000418576 TNS2Q63HR2 1409 aa24.58■■□□□ 1.53
SEMA3B-202ENST00000418576 PNISRQ8TF01 805 aaKnown RBP24.57■■□□□ 1.52
SEMA3B-202ENST00000418576 LRRC37A3O60309 1634 aa24.57■■□□□ 1.52
SEMA3B-202ENST00000418576 ADAMTS8Q9UP79 889 aa24.57■■□□□ 1.52
SEMA3B-202ENST00000418576 DDX54Q8TDD1 881 aaKnown RBP24.56■■□□□ 1.52
SEMA3B-202ENST00000418576 PCDH11XQ9BZA7 1347 aa24.56■■□□□ 1.52
SEMA3B-202ENST00000418576 PCDH11YQ9BZA8 1340 aa24.56■■□□□ 1.52
SEMA3B-202ENST00000418576 MAPK8IP3Q9UPT6 1336 aa24.52■■□□□ 1.52
SEMA3B-202ENST00000418576 MARCH10Q8NA82 808 aaPredicted RBP24.52■■□□□ 1.52
SEMA3B-202ENST00000418576 ZNF530Q6P9A1 599 aaPredicted RBP24.51■■□□□ 1.51
SEMA3B-202ENST00000418576 IFNL2Q8IZJ0 200 aa24.51■■□□□ 1.51
SEMA3B-202ENST00000418576 GAS2L2Q8NHY3 880 aa24.51■■□□□ 1.51
SEMA3B-202ENST00000418576 PHACTR3Q96KR7 559 aa24.51■■□□□ 1.51
SEMA3B-202ENST00000418576 PLEKHF1Q96S99 279 aa24.51■■□□□ 1.51
SEMA3B-202ENST00000418576 PKD1L3Q7Z443 1732 aa24.5■■□□□ 1.51
SEMA3B-202ENST00000418576 C1orf141Q5JVX7 400 aa24.5■■□□□ 1.51
SEMA3B-202ENST00000418576 BRWD3Q6RI45 1802 aa24.5■■□□□ 1.51
SEMA3B-202ENST00000418576 MTHFSDQ2M296 383 aaKnown RBP24.49■■□□□ 1.51
SEMA3B-202ENST00000418576 FAM9BQ8IZU0 186 aa24.49■■□□□ 1.51
SEMA3B-202ENST00000418576 RUNDC1Q96C34 613 aa24.49■■□□□ 1.51
SEMA3B-202ENST00000418576 CYP27B1O15528 508 aa24.49■■□□□ 1.51
SEMA3B-202ENST00000418576 FAM196AQ6ZSG2 479 aa24.48■■□□□ 1.51
SEMA3B-202ENST00000418576 HSP90AB1P08238 724 aaKnown RBP24.47■■□□□ 1.51
SEMA3B-202ENST00000418576 PHKG2P15735 406 aa24.47■■□□□ 1.51
SEMA3B-202ENST00000418576 FAM182BQ5T319 152 aa24.47■■□□□ 1.51
SEMA3B-202ENST00000418576 CCDC146Q8IYE0 955 aa24.47■■□□□ 1.51
SEMA3B-202ENST00000418576 AKAP4Q5JQC9 854 aa24.46■■□□□ 1.51
SEMA3B-202ENST00000418576 ILDR2Q71H61 639 aa24.45■■□□□ 1.5
SEMA3B-202ENST00000418576 SHANK3Q9BYB0 1731 aa24.44■■□□□ 1.5
SEMA3B-202ENST00000418576 NKX1-1Q15270 411 aaPredicted RBP24.44■■□□□ 1.5
SEMA3B-202ENST00000418576 BCL9O00512 1426 aa24.43■■□□□ 1.5
SEMA3B-202ENST00000418576 DCAF5Q96JK2 942 aa24.42■■□□□ 1.5
SEMA3B-202ENST00000418576 GNAT3A8MTJ3 354 aa24.42■■□□□ 1.5
SEMA3B-202ENST00000418576 NFE2L2Q16236 605 aa24.42■■□□□ 1.5
SEMA3B-202ENST00000418576 MAP3K5Q99683 1374 aa24.4■■□□□ 1.5
SEMA3B-202ENST00000418576 RTF1Q92541 710 aaKnown RBP24.39■■□□□ 1.5
SEMA3B-202ENST00000418576 MPRIPQ6WCQ1 1025 aa24.39■■□□□ 1.49
SEMA3B-202ENST00000418576 TMPOP42166 694 aaKnown RBP24.38■■□□□ 1.49
SEMA3B-202ENST00000418576 HTATSF1O43719 755 aaKnown RBP24.37■■□□□ 1.49
SEMA3B-202ENST00000418576 RIPK4P57078 832 aa24.37■■□□□ 1.49
SEMA3B-202ENST00000418576 ACSBG1Q96GR2 724 aa24.37■■□□□ 1.49
SEMA3B-202ENST00000418576 APAF1O14727 1248 aa24.37■■□□□ 1.49
SEMA3B-202ENST00000418576 SYTL4Q96C24 671 aaPredicted RBP24.36■■□□□ 1.49
SEMA3B-202ENST00000418576 LMOD3Q0VAK6 560 aa24.35■■□□□ 1.49
SEMA3B-202ENST00000418576 NEUROD2Q15784 382 aa24.35■■□□□ 1.49
SEMA3B-202ENST00000418576 ERVV-2B6SEH9 535 aa24.34■■□□□ 1.49
SEMA3B-202ENST00000418576 RNMTO43148 476 aaKnown RBP24.34■■□□□ 1.49
SEMA3B-202ENST00000418576 PRIM1P49642 420 aaKnown RBP24.34■■□□□ 1.49
SEMA3B-202ENST00000418576 RRP7AQ9Y3A4 280 aaKnown RBP24.34■■□□□ 1.49
SEMA3B-202ENST00000418576 TRIM37O94972 964 aa24.34■■□□□ 1.49
SEMA3B-202ENST00000418576 EP400Q96L91 3159 aa24.33■■□□□ 1.49
SEMA3B-202ENST00000418576 BCL11BQ9C0K0 894 aaPredicted RBP24.33■■□□□ 1.49
SEMA3B-202ENST00000418576 LGR6Q9HBX8 967 aa24.33■■□□□ 1.49
SEMA3B-202ENST00000418576 KDM6AO15550 1401 aaPredicted RBP24.33■■□□□ 1.48
SEMA3B-202ENST00000418576 CABP4P57796 275 aa24.32■■□□□ 1.48
SEMA3B-202ENST00000418576 KCNQ2O43526 872 aa24.31■■□□□ 1.48
SEMA3B-202ENST00000418576 TMOD3Q9NYL9 352 aa24.31■■□□□ 1.48
SEMA3B-202ENST00000418576 SF3B2Q13435 895 aaKnown RBP24.31■■□□□ 1.48
SEMA3B-202ENST00000418576 CCDC125Q86Z20 511 aa24.31■■□□□ 1.48
SEMA3B-202ENST00000418576 IL17REQ8NFR9 667 aa24.31■■□□□ 1.48
SEMA3B-202ENST00000418576 KAT6BQ8WYB5 2073 aa24.3■■□□□ 1.48
SEMA3B-202ENST00000418576 MCM10Q7L590 875 aa24.3■■□□□ 1.48
SEMA3B-202ENST00000418576 DOT1LQ8TEK3 1739 aa24.3■■□□□ 1.48
SEMA3B-202ENST00000418576 TEFQ10587 303 aa24.29■■□□□ 1.48
SEMA3B-202ENST00000418576 SLC52A2Q9HAB3 445 aa24.29■■□□□ 1.48
SEMA3B-202ENST00000418576 DCTN1Q14203 1278 aa24.28■■□□□ 1.48
SEMA3B-202ENST00000418576 NFATC2IPQ8NCF5 419 aa24.28■■□□□ 1.48
SEMA3B-202ENST00000418576 CEMIPQ8WUJ3 1361 aa24.28■■□□□ 1.48
SEMA3B-202ENST00000418576 NCBP3Q53F19 620 aaKnown RBP24.27■■□□□ 1.48
SEMA3B-202ENST00000418576 NGEFQ8N5V2 710 aa24.27■■□□□ 1.48
SEMA3B-202ENST00000418576 SBF2Q86WG5 1849 aa24.27■■□□□ 1.48
SEMA3B-202ENST00000418576 NHSQ6T4R5 1651 aa24.27■■□□□ 1.48
SEMA3B-202ENST00000418576 PIGBQ92521 554 aa24.26■■□□□ 1.47
SEMA3B-202ENST00000418576 SCN11AQ9UI33 1791 aa24.26■■□□□ 1.47
SEMA3B-202ENST00000418576 DLG5Q8TDM6 1919 aa24.26■■□□□ 1.47
SEMA3B-202ENST00000418576 TOGARAM1Q9Y4F4 1720 aa24.26■■□□□ 1.47
SEMA3B-202ENST00000418576 TRIM35Q9UPQ4 493 aa24.26■■□□□ 1.47
SEMA3B-202ENST00000418576 APBA3O96018 575 aa24.25■■□□□ 1.47
SEMA3B-202ENST00000418576 PTF1AQ7RTS3 328 aa24.25■■□□□ 1.47
SEMA3B-202ENST00000418576 ADAMTS7Q9UKP4 1686 aa24.25■■□□□ 1.47
SEMA3B-202ENST00000418576 CCDC27Q2M243 656 aa24.24■■□□□ 1.47
SEMA3B-202ENST00000418576 UPF1Q92900 1129 aaKnown RBP eCLIP24.24■■□□□ 1.471e-8■■■□□ 18.2
SEMA3B-202ENST00000418576 SENP3-EIF4A1A0A087X0R7 540 aa24.24■■□□□ 1.47
SEMA3B-202ENST00000418576 MRC1P22897 1456 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms