RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 KDF1Q8NAX2 398 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P20-201ENST00000417997 RNF217Q8TC41 542 aa7.36□□□□□ -1.23
HMGB3P20-201ENST00000417997 RAD21O60216 631 aa7.35□□□□□ -1.23
HMGB3P20-201ENST00000417997 MYCP01106 439 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P20-201ENST00000417997 WASHC4Q2M389 1173 aa7.35□□□□□ -1.23
HMGB3P20-201ENST00000417997 RNF135Q8IUD6 432 aa7.35□□□□□ -1.23
HMGB3P20-201ENST00000417997 NLRP3Q96P20 1036 aa7.35□□□□□ -1.23
HMGB3P20-201ENST00000417997 CCDC85AQ96PX6 553 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P20-201ENST00000417997 COG6Q9Y2V7 657 aa7.35□□□□□ -1.23
HMGB3P20-201ENST00000417997 A0A1W2PRU2 124 aa7.34□□□□□ -1.23
HMGB3P20-201ENST00000417997 SEMA3FQ13275 785 aa7.34□□□□□ -1.23
HMGB3P20-201ENST00000417997 FOXD4L5Q5VV16 416 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P20-201ENST00000417997 PRICKLE2Q7Z3G6 844 aa7.34□□□□□ -1.23
HMGB3P20-201ENST00000417997 WWC1Q8IX03 1113 aa7.34□□□□□ -1.23
HMGB3P20-201ENST00000417997 CCDC155Q8N6L0 562 aa7.34□□□□□ -1.23
HMGB3P20-201ENST00000417997 CDCA7Q9BWT1 371 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P20-201ENST00000417997 DOLKQ9UPQ8 538 aa7.34□□□□□ -1.23
HMGB3P20-201ENST00000417997 WIPF1O43516 503 aa7.33□□□□□ -1.24
HMGB3P20-201ENST00000417997 UBTFP17480 764 aaKnown RBP7.33□□□□□ -1.24
HMGB3P20-201ENST00000417997 INSM1Q01101 510 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P20-201ENST00000417997 SLC27A3Q5K4L6 730 aa7.33□□□□□ -1.24
HMGB3P20-201ENST00000417997 LYSMD3Q7Z3D4 306 aa7.33□□□□□ -1.24
HMGB3P20-201ENST00000417997 POM121Q96HA1 1249 aa7.33□□□□□ -1.24
HMGB3P20-201ENST00000417997 ARHGEF10LQ9HCE6 1279 aa7.33□□□□□ -1.24
HMGB3P20-201ENST00000417997 RHOQP17081 205 aa7.32□□□□□ -1.24
HMGB3P20-201ENST00000417997 FLIIQ13045 1269 aa7.32□□□□□ -1.24
HMGB3P20-201ENST00000417997 TMEM132AQ24JP5 1023 aa7.32□□□□□ -1.24
HMGB3P20-201ENST00000417997 OXLD1Q5BKU9 147 aa7.32□□□□□ -1.24
HMGB3P20-201ENST00000417997 OSBPL3Q9H4L5 887 aa7.32□□□□□ -1.24
HMGB3P20-201ENST00000417997 RAB6BQ9NRW1 208 aa7.32□□□□□ -1.24
HMGB3P20-201ENST00000417997 CDC14CA4D256 554 aa7.31□□□□□ -1.24
HMGB3P20-201ENST00000417997 RNF144AP50876 292 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P20-201ENST00000417997 TSGA10IPQ3SY00 556 aa7.31□□□□□ -1.24
HMGB3P20-201ENST00000417997 SLC35F4A4IF30 521 aa7.3□□□□□ -1.24
HMGB3P20-201ENST00000417997 TRAK2O60296 914 aa7.29□□□□□ -1.24
HMGB3P20-201ENST00000417997 VSIG8P0DPA2 414 aa7.29□□□□□ -1.24
HMGB3P20-201ENST00000417997 SOX11P35716 441 aa7.29□□□□□ -1.24
HMGB3P20-201ENST00000417997 USP4Q13107 963 aa7.29□□□□□ -1.24
HMGB3P20-201ENST00000417997 CLN3Q13286 438 aa7.29□□□□□ -1.24
HMGB3P20-201ENST00000417997 GNRH1P01148 92 aa7.28□□□□□ -1.24
HMGB3P20-201ENST00000417997 ITGA6P23229 1130 aa7.28□□□□□ -1.24
HMGB3P20-201ENST00000417997 GPC1P35052 558 aa7.28□□□□□ -1.24
HMGB3P20-201ENST00000417997 POU4F2Q12837 409 aa7.28□□□□□ -1.24
HMGB3P20-201ENST00000417997 VWA5B2Q8N398 1253 aa7.28□□□□□ -1.24
HMGB3P20-201ENST00000417997 PHTF2Q8N3S3 785 aa7.28□□□□□ -1.24
HMGB3P20-201ENST00000417997 SENP3-EIF4A1A0A087X0R7 540 aa7.27□□□□□ -1.25
HMGB3P20-201ENST00000417997 RIPOR1Q6ZS17 1223 aa7.27□□□□□ -1.25
HMGB3P20-201ENST00000417997 PLPP7Q8NBV4 271 aa7.27□□□□□ -1.25
HMGB3P20-201ENST00000417997 CNKSR1Q969H4 720 aa7.27□□□□□ -1.25
HMGB3P20-201ENST00000417997 SIRT1Q96EB6 747 aa7.27□□□□□ -1.25
HMGB3P20-201ENST00000417997 STAU1O95793 577 aaKnown RBP7.26□□□□□ -1.25
HMGB3P20-201ENST00000417997 GTF2E1P29083 439 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P20-201ENST00000417997 SV2AQ7L0J3 742 aa7.26□□□□□ -1.25
HMGB3P20-201ENST00000417997 GPR161Q8N6U8 529 aaKnown RBP7.26□□□□□ -1.25
HMGB3P20-201ENST00000417997 GAS2L1Q99501 681 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P20-201ENST00000417997 STK17AQ9UEE5 414 aa7.26□□□□□ -1.25
HMGB3P20-201ENST00000417997 PIK3CDO00329 1044 aa7.25□□□□□ -1.25
HMGB3P20-201ENST00000417997 IL2RAP01589 272 aa7.25□□□□□ -1.25
HMGB3P20-201ENST00000417997 SKIP12755 728 aa7.25□□□□□ -1.25
HMGB3P20-201ENST00000417997 CENPCQ03188 943 aa7.25□□□□□ -1.25
HMGB3P20-201ENST00000417997 MAP7D1Q3KQU3 841 aa7.25□□□□□ -1.25
HMGB3P20-201ENST00000417997 ESCO1Q5FWF5 840 aa7.25□□□□□ -1.25
HMGB3P20-201ENST00000417997 ZSCAN1Q8NBB4 408 aa7.25□□□□□ -1.25
HMGB3P20-201ENST00000417997 CNTNAP3BQ96NU0 1288 aa7.25□□□□□ -1.25
HMGB3P20-201ENST00000417997 ESYT1Q9BSJ8 1104 aa7.25□□□□□ -1.25
HMGB3P20-201ENST00000417997 CNTNAP3Q9BZ76 1288 aa7.25□□□□□ -1.25
HMGB3P20-201ENST00000417997 GRIP2Q9C0E4 1043 aa7.25□□□□□ -1.25
HMGB3P20-201ENST00000417997 PHKA2P46019 1235 aa7.24□□□□□ -1.25
HMGB3P20-201ENST00000417997 TMEM214Q6NUQ4 689 aaKnown RBP7.24□□□□□ -1.25
HMGB3P20-201ENST00000417997 NBPF10Q6P3W6 841 aaKnown RBP7.24□□□□□ -1.25
HMGB3P20-201ENST00000417997 TAS1R3Q7RTX0 852 aa7.24□□□□□ -1.25
HMGB3P20-201ENST00000417997 NBPF15Q8N660 670 aa7.24□□□□□ -1.25
HMGB3P20-201ENST00000417997 ZSCAN10Q96SZ4 725 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P20-201ENST00000417997 COL25A1Q9BXS0 654 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P20-201ENST00000417997 FAM181BA6NEQ2 426 aa7.23□□□□□ -1.25
HMGB3P20-201ENST00000417997 POM121CA8CG34 1229 aa7.23□□□□□ -1.25
HMGB3P20-201ENST00000417997 NANOS1Q8WY41 292 aaKnown RBP7.23□□□□□ -1.25
HMGB3P20-201ENST00000417997 CLUAP1Q96AJ1 413 aa7.23□□□□□ -1.25
HMGB3P20-201ENST00000417997 XAGE2Q96GT9 111 aa7.23□□□□□ -1.25
HMGB3P20-201ENST00000417997 TIMMDC1Q9NPL8 285 aa7.23□□□□□ -1.25
HMGB3P20-201ENST00000417997 CUEDC1Q9NWM3 386 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P20-201ENST00000417997 WASLO00401 505 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P20-201ENST00000417997 TLR1Q15399 786 aa7.22□□□□□ -1.25
HMGB3P20-201ENST00000417997 GNASQ5JWF2 1037 aa7.22□□□□□ -1.25
HMGB3P20-201ENST00000417997 ALG2Q9H553 416 aa7.22□□□□□ -1.25
HMGB3P20-201ENST00000417997 ETNK1Q9HBU6 452 aa7.22□□□□□ -1.25
HMGB3P20-201ENST00000417997 CHIC2Q9UKJ5 165 aa7.22□□□□□ -1.25
HMGB3P20-201ENST00000417997 KRT76Q01546 638 aa7.21□□□□□ -1.26
HMGB3P20-201ENST00000417997 PSME1Q06323 249 aa7.21□□□□□ -1.26
HMGB3P20-201ENST00000417997 EML3Q32P44 896 aa7.21□□□□□ -1.26
HMGB3P20-201ENST00000417997 RNFT1Q5M7Z0 435 aa7.21□□□□□ -1.26
HMGB3P20-201ENST00000417997 DEPDC4Q8N2C3 294 aa7.21□□□□□ -1.26
HMGB3P20-201ENST00000417997 DYRK1BQ9Y463 629 aa7.21□□□□□ -1.26
HMGB3P20-201ENST00000417997 SPATA31C2B4DYI2 1134 aa7.2□□□□□ -1.26
HMGB3P20-201ENST00000417997 GDF10P55107 478 aa7.2□□□□□ -1.26
HMGB3P20-201ENST00000417997 HDGFL1Q5TGJ6 251 aa7.2□□□□□ -1.26
HMGB3P20-201ENST00000417997 GPAMQ9HCL2 828 aa7.2□□□□□ -1.26
HMGB3P20-201ENST00000417997 SERTAD1Q9UHV2 236 aa7.2□□□□□ -1.26
HMGB3P20-201ENST00000417997 GPR25O00155 361 aa7.19□□□□□ -1.26
HMGB3P20-201ENST00000417997 NCOA4Q13772 614 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms