RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 IP6K1Q92551 441 aa19.66■□□□□ 0.74
SSB-204ENST00000417292 LTV1Q96GA3 475 aaPredicted RBP19.66■□□□□ 0.74
SSB-204ENST00000417292 SLC12A5Q9H2X9 1139 aa19.65■□□□□ 0.74
SSB-204ENST00000417292 CCNL1Q9UK58 526 aaPredicted RBP19.65■□□□□ 0.74
SSB-204ENST00000417292 MSH5O43196 834 aa19.64■□□□□ 0.73
SSB-204ENST00000417292 MSL1Q68DK7 614 aa19.64■□□□□ 0.73
SSB-204ENST00000417292 TMC1Q8TDI8 760 aa19.64■□□□□ 0.73
SSB-204ENST00000417292 EDC4Q6P2E9 1401 aaKnown RBP19.64■□□□□ 0.73
SSB-204ENST00000417292 FAM208AQ9UK61 1670 aaKnown RBP19.63■□□□□ 0.73
SSB-204ENST00000417292 HDGFL2Q7Z4V5 671 aaPredicted RBP19.62■□□□□ 0.73
SSB-204ENST00000417292 SIN3AQ96ST3 1273 aa19.62■□□□□ 0.73
SSB-204ENST00000417292 ADCY9O60503 1353 aa19.61■□□□□ 0.73
SSB-204ENST00000417292 GPBP1L1Q9HC44 474 aaPredicted RBP19.61■□□□□ 0.73
SSB-204ENST00000417292 MEGF6O75095 1541 aa19.61■□□□□ 0.73
SSB-204ENST00000417292 A0A1W2PP64 1363 aa19.6■□□□□ 0.73
SSB-204ENST00000417292 HSPA6P17066 643 aa19.6■□□□□ 0.73
SSB-204ENST00000417292 ZCRB1Q8TBF4 217 aaKnown RBP19.6■□□□□ 0.73
SSB-204ENST00000417292 ZNF526Q8TF50 670 aaPredicted RBP19.59■□□□□ 0.73
SSB-204ENST00000417292 CD2APQ9Y5K6 639 aa19.59■□□□□ 0.73
SSB-204ENST00000417292 RGPD2P0DJD1 1756 aa19.59■□□□□ 0.73
SSB-204ENST00000417292 USP47Q96K76 1375 aa19.58■□□□□ 0.73
SSB-204ENST00000417292 MAP3K19Q56UN5 1328 aa19.58■□□□□ 0.73
SSB-204ENST00000417292 FBLN1P23142 703 aa19.58■□□□□ 0.72
SSB-204ENST00000417292 HOXC9P31274 260 aa19.57■□□□□ 0.72
SSB-204ENST00000417292 TERF2IPQ9NYB0 399 aa19.56■□□□□ 0.72
SSB-204ENST00000417292 C5P01031 1676 aa19.56■□□□□ 0.72
SSB-204ENST00000417292 NEUROD1Q13562 356 aa19.55■□□□□ 0.72
SSB-204ENST00000417292 AMPHP49418 695 aa19.53■□□□□ 0.72
SSB-204ENST00000417292 NBPF6Q5VWK0 638 aa19.52■□□□□ 0.72
SSB-204ENST00000417292 AMIGO3Q86WK7 504 aa19.52■□□□□ 0.72
SSB-204ENST00000417292 NBPF4Q96M43 638 aa19.52■□□□□ 0.72
SSB-204ENST00000417292 WWC3Q9ULE0 1092 aa19.52■□□□□ 0.72
SSB-204ENST00000417292 TAF1LQ8IZX4 1826 aa19.51■□□□□ 0.71
SSB-204ENST00000417292 USHBP1Q8N6Y0 703 aa19.51■□□□□ 0.71
SSB-204ENST00000417292 FLAD1Q8NFF5 587 aa19.51■□□□□ 0.71
SSB-204ENST00000417292 COG3Q96JB2 828 aa19.51■□□□□ 0.71
SSB-204ENST00000417292 CARD11Q9BXL7 1154 aa19.51■□□□□ 0.71
SSB-204ENST00000417292 PALLDQ8WX93 1383 aa19.5■□□□□ 0.71
SSB-204ENST00000417292 IGSF1Q8N6C5 1336 aa19.5■□□□□ 0.71
SSB-204ENST00000417292 TOGARAM1Q9Y4F4 1720 aa19.49■□□□□ 0.71
SSB-204ENST00000417292 KIF3CO14782 793 aa19.49■□□□□ 0.71
SSB-204ENST00000417292 SMIM5Q71RC9 77 aa19.49■□□□□ 0.71
SSB-204ENST00000417292 PUS7Q96PZ0 661 aaKnown RBP19.49■□□□□ 0.71
SSB-204ENST00000417292 CGNL1Q0VF96 1302 aa19.48■□□□□ 0.71
SSB-204ENST00000417292 C4BP0C0L5 1744 aa19.48■□□□□ 0.71
SSB-204ENST00000417292 RRS1Q15050 365 aaKnown RBP19.47■□□□□ 0.71
SSB-204ENST00000417292 MPRIPQ6WCQ1 1025 aa19.47■□□□□ 0.71
SSB-204ENST00000417292 RTL1A6NKG5 1358 aa19.46■□□□□ 0.71
SSB-204ENST00000417292 RAPGEF4Q8WZA2 1011 aa19.46■□□□□ 0.71
SSB-204ENST00000417292 UBR3Q6ZT12 1888 aa19.44■□□□□ 0.7
SSB-204ENST00000417292 PHF14O94880 888 aa19.44■□□□□ 0.7
SSB-204ENST00000417292 AK7Q96M32 723 aa19.44■□□□□ 0.7
SSB-204ENST00000417292 PCDH11XQ9BZA7 1347 aa19.44■□□□□ 0.7
SSB-204ENST00000417292 PCDH11YQ9BZA8 1340 aa19.44■□□□□ 0.7
SSB-204ENST00000417292 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.43■□□□□ 0.7
SSB-204ENST00000417292 CYP27B1O15528 508 aa19.43■□□□□ 0.7
SSB-204ENST00000417292 TATP17735 454 aaPredicted RBP19.43■□□□□ 0.7
SSB-204ENST00000417292 HMGB2P26583 209 aaKnown RBP19.42■□□□□ 0.7
SSB-204ENST00000417292 CICQ96RK0 1608 aaPredicted RBP19.41■□□□□ 0.7
SSB-204ENST00000417292 PCNTO95613 3336 aa19.41■□□□□ 0.7
SSB-204ENST00000417292 DNAJC5GQ8N7S2 189 aa19.41■□□□□ 0.7
SSB-204ENST00000417292 TESK2Q96S53 571 aa19.41■□□□□ 0.7
SSB-204ENST00000417292 ITGB4P16144 1822 aa19.41■□□□□ 0.7
SSB-204ENST00000417292 APLP1P51693 650 aa19.4■□□□□ 0.7
SSB-204ENST00000417292 HSP90AB2PQ58FF8 381 aa19.4■□□□□ 0.7
SSB-204ENST00000417292 PIGBQ92521 554 aa19.4■□□□□ 0.7
SSB-204ENST00000417292 SMARCC1Q92922 1105 aaPredicted RBP19.4■□□□□ 0.7
SSB-204ENST00000417292 SMG6Q86US8 1419 aaKnown RBP19.4■□□□□ 0.7
SSB-204ENST00000417292 FYB1O15117 783 aa19.39■□□□□ 0.69
SSB-204ENST00000417292 GGNBP2Q9H3C7 697 aa19.39■□□□□ 0.69
SSB-204ENST00000417292 MAP2P11137 1827 aaKnown RBP19.39■□□□□ 0.69
SSB-204ENST00000417292 INSRP06213 1382 aa19.38■□□□□ 0.69
SSB-204ENST00000417292 SSFA2P28290 1259 aa19.38■□□□□ 0.69
SSB-204ENST00000417292 LINC00116Q8NCU8 138 aa19.38■□□□□ 0.69
SSB-204ENST00000417292 NSD3Q9BZ95 1437 aa19.37■□□□□ 0.69
SSB-204ENST00000417292 ST20-MTHFSA0A0A6YYL1 179 aa19.36■□□□□ 0.69
SSB-204ENST00000417292 TOMM70O94826 608 aa19.36■□□□□ 0.69
SSB-204ENST00000417292 PXDNLA1KZ92 1463 aa19.35■□□□□ 0.69
SSB-204ENST00000417292 PKD1L3Q7Z443 1732 aa19.35■□□□□ 0.69
SSB-204ENST00000417292 KIAA1551Q9HCM1 1747 aa19.35■□□□□ 0.69
SSB-204ENST00000417292 LOC102724428A0A0B4J2F2 783 aa19.35■□□□□ 0.69
SSB-204ENST00000417292 SIK1P57059 783 aa19.35■□□□□ 0.69
SSB-204ENST00000417292 MMP10P09238 476 aa19.34■□□□□ 0.69
SSB-204ENST00000417292 ITPK1Q13572 414 aa19.34■□□□□ 0.69
SSB-204ENST00000417292 NKX1-1Q15270 411 aaPredicted RBP19.34■□□□□ 0.69
SSB-204ENST00000417292 FLT4P35916 1363 aa19.33■□□□□ 0.69
SSB-204ENST00000417292 GNPATO15228 680 aa19.33■□□□□ 0.68
SSB-204ENST00000417292 NMRK2Q9NPI5 230 aa19.33■□□□□ 0.68
SSB-204ENST00000417292 KIF13BQ9NQT8 1826 aa19.32■□□□□ 0.68
SSB-204ENST00000417292 N4BP2Q86UW6 1770 aaPredicted RBP19.32■□□□□ 0.68
SSB-204ENST00000417292 A0A0G2JLW4 131 aa19.31■□□□□ 0.68
SSB-204ENST00000417292 ASAP1Q9ULH1 1129 aa19.31■□□□□ 0.68
SSB-204ENST00000417292 BCS1LQ9Y276 419 aa19.31■□□□□ 0.68
SSB-204ENST00000417292 NCAPD2Q15021 1401 aa19.3■□□□□ 0.68
SSB-204ENST00000417292 KIF24Q5T7B8 1368 aa19.3■□□□□ 0.68
SSB-204ENST00000417292 ATP6V1AP38606 617 aa19.29■□□□□ 0.68
SSB-204ENST00000417292 TGFB2P61812 414 aa19.29■□□□□ 0.68
SSB-204ENST00000417292 WDR90Q96KV7 1748 aa19.28■□□□□ 0.68
SSB-204ENST00000417292 C10orf71Q711Q0 1435 aa19.28■□□□□ 0.68
SSB-204ENST00000417292 HTRA3P83110 453 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms