RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 RAB15P59190 212 aa8.44□□□□□ -1.06
ATG4AP1-201ENST00000416893 NANOS1Q8WY41 292 aaKnown RBP8.44□□□□□ -1.06
ATG4AP1-201ENST00000416893 INSM2Q96T92 566 aaPredicted RBP8.44□□□□□ -1.06
ATG4AP1-201ENST00000416893 POLMQ9NP87 494 aaPredicted RBP8.44□□□□□ -1.06
ATG4AP1-201ENST00000416893 MRC2Q9UBG0 1479 aa8.44□□□□□ -1.06
ATG4AP1-201ENST00000416893 ZNF784Q8NCA9 323 aaPredicted RBP8.43□□□□□ -1.06
ATG4AP1-201ENST00000416893 CNTNAP3BQ96NU0 1288 aa8.43□□□□□ -1.06
ATG4AP1-201ENST00000416893 CNTNAP3Q9BZ76 1288 aa8.43□□□□□ -1.06
ATG4AP1-201ENST00000416893 ZNF395Q9H8N7 513 aaPredicted RBP8.43□□□□□ -1.06
ATG4AP1-201ENST00000416893 ERVH48-1M5A8F1 160 aa8.42□□□□□ -1.06
ATG4AP1-201ENST00000416893 ADH1AP07327 375 aa8.42□□□□□ -1.06
ATG4AP1-201ENST00000416893 BANK1Q8NDB2 785 aa8.42□□□□□ -1.06
ATG4AP1-201ENST00000416893 COL25A1Q9BXS0 654 aaPredicted RBP8.42□□□□□ -1.06
ATG4AP1-201ENST00000416893 WDR62O43379 1518 aa8.41□□□□□ -1.06
ATG4AP1-201ENST00000416893 ESPNB1AK53 854 aa8.41□□□□□ -1.06
ATG4AP1-201ENST00000416893 APBB1O00213 710 aa8.41□□□□□ -1.06
ATG4AP1-201ENST00000416893 RNF217Q8TC41 542 aa8.41□□□□□ -1.06
ATG4AP1-201ENST00000416893 LILRA1O75019 489 aa8.4□□□□□ -1.06
ATG4AP1-201ENST00000416893 ITGA6P23229 1130 aa8.4□□□□□ -1.06
ATG4AP1-201ENST00000416893 ADD1P35611 737 aaKnown RBP8.4□□□□□ -1.06
ATG4AP1-201ENST00000416893 TRIM34Q9BYJ4 488 aa8.4□□□□□ -1.06
ATG4AP1-201ENST00000416893 URB2Q14146 1524 aaKnown RBP8.39□□□□□ -1.07
ATG4AP1-201ENST00000416893 SOCS7O14512 581 aa8.39□□□□□ -1.07
ATG4AP1-201ENST00000416893 CDC14CA4D256 554 aa8.38□□□□□ -1.07
ATG4AP1-201ENST00000416893 PTGIRP43119 386 aa8.38□□□□□ -1.07
ATG4AP1-201ENST00000416893 FOXD4L5Q5VV16 416 aaPredicted RBP8.38□□□□□ -1.07
ATG4AP1-201ENST00000416893 SV2AQ7L0J3 742 aa8.38□□□□□ -1.07
ATG4AP1-201ENST00000416893 SEPT12Q8IYM1 358 aa8.38□□□□□ -1.07
ATG4AP1-201ENST00000416893 VWA5B2Q8N398 1253 aa8.38□□□□□ -1.07
ATG4AP1-201ENST00000416893 KDF1Q8NAX2 398 aaPredicted RBP8.38□□□□□ -1.07
ATG4AP1-201ENST00000416893 SENP3-EIF4A1A0A087X0R7 540 aa8.37□□□□□ -1.07
ATG4AP1-201ENST00000416893 KCNMA1Q12791 1236 aa8.37□□□□□ -1.07
ATG4AP1-201ENST00000416893 RNFT1Q5M7Z0 435 aa8.37□□□□□ -1.07
ATG4AP1-201ENST00000416893 ZBBXA8MT70 800 aa8.36□□□□□ -1.07
ATG4AP1-201ENST00000416893 TRIM52Q96A61 297 aa8.36□□□□□ -1.07
ATG4AP1-201ENST00000416893 CYLDQ9NQC7 956 aa8.36□□□□□ -1.07
ATG4AP1-201ENST00000416893 LYSMD3Q7Z3D4 306 aa8.35□□□□□ -1.07
ATG4AP1-201ENST00000416893 ADAMTS8Q9UP79 889 aa8.35□□□□□ -1.07
ATG4AP1-201ENST00000416893 GSK3AP49840 483 aa8.34□□□□□ -1.07
ATG4AP1-201ENST00000416893 ZNF385CQ66K41 422 aaPredicted RBP8.34□□□□□ -1.07
ATG4AP1-201ENST00000416893 GJD4Q96KN9 370 aaPredicted RBP8.34□□□□□ -1.07
ATG4AP1-201ENST00000416893 PCDHB9Q9Y5E1 797 aa8.34□□□□□ -1.07
ATG4AP1-201ENST00000416893 TOPBP1Q92547 1522 aa8.34□□□□□ -1.08
ATG4AP1-201ENST00000416893 GIGYF1O75420 1035 aaPredicted RBP8.33□□□□□ -1.08
ATG4AP1-201ENST00000416893 FBXO45P0C2W1 286 aa8.33□□□□□ -1.08
ATG4AP1-201ENST00000416893 SLURP2P0DP57 97 aa8.33□□□□□ -1.08
ATG4AP1-201ENST00000416893 DNMBPQ6XZF7 1577 aa8.33□□□□□ -1.08
ATG4AP1-201ENST00000416893 SVOPQ8N4V2 548 aa8.33□□□□□ -1.08
ATG4AP1-201ENST00000416893 PRM3Q9NNZ6 103 aa8.33□□□□□ -1.08
ATG4AP1-201ENST00000416893 RNF144AP50876 292 aaPredicted RBP8.32□□□□□ -1.08
ATG4AP1-201ENST00000416893 MTMR14Q8NCE2 650 aa8.32□□□□□ -1.08
ATG4AP1-201ENST00000416893 NDUFB9Q9Y6M9 179 aa8.32□□□□□ -1.08
ATG4AP1-201ENST00000416893 ABCC8Q09428 1581 aa8.31□□□□□ -1.08
ATG4AP1-201ENST00000416893 ATP5J2-PTCD1G3V325 749 aa8.31□□□□□ -1.08
ATG4AP1-201ENST00000416893 RNF225M0QZC1 329 aaPredicted RBP8.31□□□□□ -1.08
ATG4AP1-201ENST00000416893 PRICKLE2Q7Z3G6 844 aa8.31□□□□□ -1.08
ATG4AP1-201ENST00000416893 WHAMMQ8TF30 809 aa8.31□□□□□ -1.08
ATG4AP1-201ENST00000416893 CCDC125Q86Z20 511 aa8.3□□□□□ -1.08
ATG4AP1-201ENST00000416893 ZNF592Q92610 1267 aa8.3□□□□□ -1.08
ATG4AP1-201ENST00000416893 SNRKQ9NRH2 765 aa8.3□□□□□ -1.08
ATG4AP1-201ENST00000416893 CUEDC1Q9NWM3 386 aaPredicted RBP8.3□□□□□ -1.08
ATG4AP1-201ENST00000416893 ARHGEF15O94989 841 aa8.29□□□□□ -1.08
ATG4AP1-201ENST00000416893 RHOQP17081 205 aa8.29□□□□□ -1.08
ATG4AP1-201ENST00000416893 RASSF7Q02833 373 aa8.29□□□□□ -1.08
ATG4AP1-201ENST00000416893 CUX1P39880 1505 aa8.29□□□□□ -1.08
ATG4AP1-201ENST00000416893 MEN1O00255 615 aa8.28□□□□□ -1.08
ATG4AP1-201ENST00000416893 GPC1P35052 558 aa8.28□□□□□ -1.08
ATG4AP1-201ENST00000416893 ERVK-9P63128 1117 aa8.28□□□□□ -1.08
ATG4AP1-201ENST00000416893 NR1H3Q13133 447 aa8.28□□□□□ -1.08
ATG4AP1-201ENST00000416893 RNF20Q5VTR2 975 aa8.28□□□□□ -1.08
ATG4AP1-201ENST00000416893 CC2D2BQ6DHV5 1058 aa8.28□□□□□ -1.08
ATG4AP1-201ENST00000416893 TMEM151AQ8N4L1 468 aa8.28□□□□□ -1.08
ATG4AP1-201ENST00000416893 KCTD17Q8N5Z5 321 aa8.28□□□□□ -1.08
ATG4AP1-201ENST00000416893 ZNF330Q9Y3S2 320 aaPredicted RBP8.28□□□□□ -1.08
ATG4AP1-201ENST00000416893 POLA1P09884 1462 aaPredicted RBP8.27□□□□□ -1.09
ATG4AP1-201ENST00000416893 IFT140Q96RY7 1462 aa8.27□□□□□ -1.09
ATG4AP1-201ENST00000416893 A0A1W2PRU2 124 aa8.27□□□□□ -1.09
ATG4AP1-201ENST00000416893 GDF11O95390 407 aa8.27□□□□□ -1.09
ATG4AP1-201ENST00000416893 ADAMTS2O95450 1211 aa8.27□□□□□ -1.09
ATG4AP1-201ENST00000416893 MCCD1P59942 119 aaPredicted RBP8.27□□□□□ -1.09
ATG4AP1-201ENST00000416893 SRSF11Q05519 484 aaKnown RBP8.26□□□□□ -1.09
ATG4AP1-201ENST00000416893 GAS6Q14393 721 aa8.26□□□□□ -1.09
ATG4AP1-201ENST00000416893 ZNF608Q9ULD9 1512 aaPredicted RBP8.25□□□□□ -1.09
ATG4AP1-201ENST00000416893 TRIM22Q8IYM9 498 aa8.25□□□□□ -1.09
ATG4AP1-201ENST00000416893 ZNF837Q96EG3 531 aaPredicted RBP8.25□□□□□ -1.09
ATG4AP1-201ENST00000416893 GMCL1Q96IK5 515 aa8.25□□□□□ -1.09
ATG4AP1-201ENST00000416893 FGD5Q6ZNL6 1462 aa8.25□□□□□ -1.09
ATG4AP1-201ENST00000416893 TARBP1Q13395 1621 aaKnown RBP8.25□□□□□ -1.09
ATG4AP1-201ENST00000416893 SCTRP47872 440 aa8.24□□□□□ -1.09
ATG4AP1-201ENST00000416893 LYPD4Q6UWN0 246 aa8.24□□□□□ -1.09
ATG4AP1-201ENST00000416893 CYP2U1Q7Z449 544 aa8.24□□□□□ -1.09
ATG4AP1-201ENST00000416893 NLRP3Q96P20 1036 aa8.24□□□□□ -1.09
ATG4AP1-201ENST00000416893 GPR37L1O60883 481 aa8.23□□□□□ -1.09
ATG4AP1-201ENST00000416893 MARSP56192 900 aaKnown RBP8.23□□□□□ -1.09
ATG4AP1-201ENST00000416893 SLC27A3Q5K4L6 730 aa8.23□□□□□ -1.09
ATG4AP1-201ENST00000416893 RIPOR1Q6ZS17 1223 aa8.23□□□□□ -1.09
ATG4AP1-201ENST00000416893 DYRK1BQ9Y463 629 aa8.23□□□□□ -1.09
ATG4AP1-201ENST00000416893 PCDHB11Q9Y5F2 797 aa8.23□□□□□ -1.09
ATG4AP1-201ENST00000416893 RAD54L2Q9Y4B4 1467 aa8.23□□□□□ -1.09
ATG4AP1-201ENST00000416893 WRNQ14191 1432 aaPredicted RBP eCLIP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms