RNA–Protein interactions for RNA: ENST00000416721.6

RBFOX2-208, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-208ENST00000416721 SBF2Q86WG5 1849 aa15.24■□□□□ 0.03
RBFOX2-208ENST00000416721 HSP90AB2PQ58FF8 381 aa15.23■□□□□ 0.03
RBFOX2-208ENST00000416721 CCNL1Q9UK58 526 aaPredicted RBP15.23■□□□□ 0.03
RBFOX2-208ENST00000416721 SMG6Q86US8 1419 aaKnown RBP15.23■□□□□ 0.03
RBFOX2-208ENST00000416721 WNK3Q9BYP7 1800 aa15.22■□□□□ 0.03
RBFOX2-208ENST00000416721 LTN1O94822 1766 aa15.21■□□□□ 0.03
RBFOX2-208ENST00000416721 MPRIPQ6WCQ1 1025 aa15.21■□□□□ 0.03
RBFOX2-208ENST00000416721 TNNT2P45379 298 aaPredicted RBP15.2■□□□□ 0.02
RBFOX2-208ENST00000416721 AKT1S1Q96B36 256 aa15.2■□□□□ 0.02
RBFOX2-208ENST00000416721 RGPD3A6NKT7 1758 aaPredicted RBP15.2■□□□□ 0.02
RBFOX2-208ENST00000416721 RGPD4Q7Z3J3 1758 aa15.2■□□□□ 0.02
RBFOX2-208ENST00000416721 EMILIN1Q9Y6C2 1016 aa15.19■□□□□ 0.02
RBFOX2-208ENST00000416721 NHSQ6T4R5 1651 aa15.19■□□□□ 0.02
RBFOX2-208ENST00000416721 MSL1Q68DK7 614 aa15.18■□□□□ 0.02
RBFOX2-208ENST00000416721 SLC16A10Q8TF71 515 aa15.18■□□□□ 0.02
RBFOX2-208ENST00000416721 SGIP1Q9BQI5 828 aa15.18■□□□□ 0.02
RBFOX2-208ENST00000416721 PNPLA7Q6ZV29 1317 aa15.17■□□□□ 0.02
RBFOX2-208ENST00000416721 MEGF6O75095 1541 aa15.17■□□□□ 0.02
RBFOX2-208ENST00000416721 CASZ1Q86V15 1759 aa15.17■□□□□ 0.02
RBFOX2-208ENST00000416721 MYOM1P52179 1685 aa15.17■□□□□ 0.02
RBFOX2-208ENST00000416721 RTL1A6NKG5 1358 aa15.17■□□□□ 0.02
RBFOX2-208ENST00000416721 CARD14Q9BXL6 1004 aa15.17■□□□□ 0.02
RBFOX2-208ENST00000416721 CGNL1Q0VF96 1302 aa15.17■□□□□ 0.02
RBFOX2-208ENST00000416721 KAT6BQ8WYB5 2073 aa15.16■□□□□ 0.02
RBFOX2-208ENST00000416721 PCDH11XQ9BZA7 1347 aa15.16■□□□□ 0.02
RBFOX2-208ENST00000416721 PCDH11YQ9BZA8 1340 aa15.16■□□□□ 0.02
RBFOX2-208ENST00000416721 FLT4P35916 1363 aa15.15■□□□□ 0.02
RBFOX2-208ENST00000416721 ZNF784Q8NCA9 323 aaPredicted RBP15.15■□□□□ 0.02
RBFOX2-208ENST00000416721 NSD3Q9BZ95 1437 aa15.15■□□□□ 0.02
RBFOX2-208ENST00000416721 INSRP06213 1382 aa15.14■□□□□ 0.01
RBFOX2-208ENST00000416721 USP54Q70EL1 1684 aa15.14■□□□□ 0.01
RBFOX2-208ENST00000416721 COL23A1Q86Y22 540 aaPredicted RBP15.14■□□□□ 0.01
RBFOX2-208ENST00000416721 BTAF1O14981 1849 aa15.14■□□□□ 0.01
RBFOX2-208ENST00000416721 PHF14O94880 888 aa15.13■□□□□ 0.01
RBFOX2-208ENST00000416721 SPG7Q9UQ90 795 aa15.13■□□□□ 0.01
RBFOX2-208ENST00000416721 CYP27B1O15528 508 aa15.12■□□□□ 0.01
RBFOX2-208ENST00000416721 NLGN2Q8NFZ4 835 aa15.12■□□□□ 0.01
RBFOX2-208ENST00000416721 AK7Q96M32 723 aa15.12■□□□□ 0.01
RBFOX2-208ENST00000416721 NSD2O96028 1365 aa15.11■□□□□ 0.01
RBFOX2-208ENST00000416721 PALLDQ8WX93 1383 aa15.11■□□□□ 0.01
RBFOX2-208ENST00000416721 SMIM5Q71RC9 77 aa15.1■□□□□ 0.01
RBFOX2-208ENST00000416721 CCER1Q8TC90 406 aaPredicted RBP15.1■□□□□ 0.01
RBFOX2-208ENST00000416721 SMARCC1Q92922 1105 aaPredicted RBP15.1■□□□□ 0.01
RBFOX2-208ENST00000416721 TMOD3Q9NYL9 352 aa15.09■□□□□ 0.01
RBFOX2-208ENST00000416721 WWC3Q9ULE0 1092 aa15.09■□□□□ 0.01
RBFOX2-208ENST00000416721 TIMELESSQ9UNS1 1208 aa15.09■□□□□ 0.01
RBFOX2-208ENST00000416721 HMGB2P26583 209 aaKnown RBP15.08■□□□□ 0
RBFOX2-208ENST00000416721 FLAD1Q8NFF5 587 aa15.08■□□□□ 0
RBFOX2-208ENST00000416721 PIGBQ92521 554 aa15.08■□□□□ 0
RBFOX2-208ENST00000416721 EYA1Q99502 592 aa15.08■□□□□ 0
RBFOX2-208ENST00000416721 FAM208AQ9UK61 1670 aaKnown RBP15.08■□□□□ 0
RBFOX2-208ENST00000416721 UTRNP46939 3433 aa15.07■□□□□ 0
RBFOX2-208ENST00000416721 PAPPAQ13219 1627 aa15.07■□□□□ 0
RBFOX2-208ENST00000416721 EIF4G2P78344 907 aaKnown RBP eCLIP15.07■□□□□ 0
RBFOX2-208ENST00000416721 POLKQ9UBT6 870 aa15.07■□□□□ 0
RBFOX2-208ENST00000416721 KIF24Q5T7B8 1368 aa15.07■□□□□ 0
RBFOX2-208ENST00000416721 DOT1LQ8TEK3 1739 aa15.06■□□□□ 0
RBFOX2-208ENST00000416721 WASHC2AQ641Q2 1341 aa15.06■□□□□ 0
RBFOX2-208ENST00000416721 SENP3-EIF4A1A0A087X0R7 540 aa15.05■□□□□ -0
RBFOX2-208ENST00000416721 GRIN3BO60391 1043 aa15.05■□□□□ -0
RBFOX2-208ENST00000416721 HSPA5P11021 654 aaKnown RBP15.05■□□□□ -0
RBFOX2-208ENST00000416721 ATP6V1AP38606 617 aa15.05■□□□□ -0
RBFOX2-208ENST00000416721 IFNL2Q8IZJ0 200 aa15.05■□□□□ -0
RBFOX2-208ENST00000416721 PANK3Q9H999 370 aa15.05■□□□□ -0
RBFOX2-208ENST00000416721 MAP3K5Q99683 1374 aa15.05■□□□□ -0
RBFOX2-208ENST00000416721 RGPD2P0DJD1 1756 aa15.05■□□□□ -0
RBFOX2-208ENST00000416721 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.04■□□□□ -0
RBFOX2-208ENST00000416721 EIF4A2Q14240 407 aaKnown RBP15.04■□□□□ -0
RBFOX2-208ENST00000416721 RBM42Q9BTD8 480 aaKnown RBP15.04■□□□□ -0
RBFOX2-208ENST00000416721 ASAP1Q9ULH1 1129 aa15.04■□□□□ -0
RBFOX2-208ENST00000416721 LOC102724428A0A0B4J2F2 783 aa15.03■□□□□ -0
RBFOX2-208ENST00000416721 GNPATO15228 680 aa15.03■□□□□ -0
RBFOX2-208ENST00000416721 YBX3P16989 372 aaKnown RBP eCLIP15.03■□□□□ -0
RBFOX2-208ENST00000416721 SIK1P57059 783 aa15.03■□□□□ -0
RBFOX2-208ENST00000416721 MORC1Q86VD1 984 aa15.03■□□□□ -0
RBFOX2-208ENST00000416721 GIGYF1O75420 1035 aaPredicted RBP15.02■□□□□ -0
RBFOX2-208ENST00000416721 PHKG2P15735 406 aa15.02■□□□□ -0
RBFOX2-208ENST00000416721 C1QTNF8P60827 252 aa15.01□□□□□ -0.01
RBFOX2-208ENST00000416721 CNGB1Q14028 1251 aaPredicted RBP15.01□□□□□ -0.01
RBFOX2-208ENST00000416721 NKX1-1Q15270 411 aaPredicted RBP15.01□□□□□ -0.01
RBFOX2-208ENST00000416721 LINC00116Q8NCU8 138 aa15.01□□□□□ -0.01
RBFOX2-208ENST00000416721 PLEKHO1Q53GL0 409 aaPredicted RBP15□□□□□ -0.01
RBFOX2-208ENST00000416721 AMIGO3Q86WK7 504 aa15□□□□□ -0.01
RBFOX2-208ENST00000416721 ZNF526Q8TF50 670 aaPredicted RBP15□□□□□ -0.01
RBFOX2-208ENST00000416721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15□□□□□ -0.01
RBFOX2-208ENST00000416721 CD2APQ9Y5K6 639 aa15□□□□□ -0.01
RBFOX2-208ENST00000416721 CLSPNQ9HAW4 1339 aa14.99□□□□□ -0.01
RBFOX2-208ENST00000416721 CABP4P57796 275 aa14.99□□□□□ -0.01
RBFOX2-208ENST00000416721 ITPK1Q13572 414 aa14.99□□□□□ -0.01
RBFOX2-208ENST00000416721 ZNF530Q6P9A1 599 aaPredicted RBP14.99□□□□□ -0.01
RBFOX2-208ENST00000416721 ATG3Q9NT62 314 aa14.99□□□□□ -0.01
RBFOX2-208ENST00000416721 KNSTRNQ9Y448 316 aa14.99□□□□□ -0.01
RBFOX2-208ENST00000416721 KIF20BQ96Q89 1820 aa14.99□□□□□ -0.01
RBFOX2-208ENST00000416721 SSFA2P28290 1259 aa14.98□□□□□ -0.01
RBFOX2-208ENST00000416721 C1orf141Q5JVX7 400 aa14.98□□□□□ -0.01
RBFOX2-208ENST00000416721 HSP90AB1P08238 724 aaKnown RBP14.97□□□□□ -0.01
RBFOX2-208ENST00000416721 MTHFSP49914 203 aa14.97□□□□□ -0.01
RBFOX2-208ENST00000416721 TRAPPC3LQ5T215 181 aa14.97□□□□□ -0.01
RBFOX2-208ENST00000416721 RTCBQ9Y3I0 505 aaKnown RBP14.97□□□□□ -0.01
RBFOX2-208ENST00000416721 SHANK3Q9BYB0 1731 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 212.5 ms