RNA–Protein interactions for RNA: ENST00000415858.3

CT47A4-201, Transcript of cancer/testis antigen family 47, member A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CT47A4, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT47A4-201ENST00000415858 RGPD2P0DJD1 1756 aa24.84■■□□□ 1.57
CT47A4-201ENST00000415858 MEGF6O75095 1541 aa24.83■■□□□ 1.57
CT47A4-201ENST00000415858 AMOTQ4VCS5 1084 aa24.83■■□□□ 1.57
CT47A4-201ENST00000415858 RGPD1P0DJD0 1748 aa24.83■■□□□ 1.57
CT47A4-201ENST00000415858 BCL9O00512 1426 aa24.82■■□□□ 1.56
CT47A4-201ENST00000415858 LRRC37A3O60309 1634 aa24.81■■□□□ 1.56
CT47A4-201ENST00000415858 FCHSD2O94868 740 aa24.8■■□□□ 1.56
CT47A4-201ENST00000415858 PLEKHO1Q53GL0 409 aaPredicted RBP24.8■■□□□ 1.56
CT47A4-201ENST00000415858 MARCH10Q8NA82 808 aaPredicted RBP24.8■■□□□ 1.56
CT47A4-201ENST00000415858 PCDH11XQ9BZA7 1347 aa24.8■■□□□ 1.56
CT47A4-201ENST00000415858 PCDH11YQ9BZA8 1340 aa24.8■■□□□ 1.56
CT47A4-201ENST00000415858 U2AF1L5P0DN76 240 aaPredicted RBP24.79■■□□□ 1.56
CT47A4-201ENST00000415858 U2AF1Q01081 240 aaKnown RBP eCLIP24.79■■□□□ 1.56
CT47A4-201ENST00000415858 CCDC125Q86Z20 511 aa24.79■■□□□ 1.56
CT47A4-201ENST00000415858 AEBP1Q8IUX7 1158 aa24.79■■□□□ 1.56
CT47A4-201ENST00000415858 PNNQ9H307 717 aaKnown RBP24.79■■□□□ 1.56
CT47A4-201ENST00000415858 BRWD3Q6RI45 1802 aa24.79■■□□□ 1.56
CT47A4-201ENST00000415858 HMOX1P09601 288 aa24.76■■□□□ 1.55
CT47A4-201ENST00000415858 DDX54Q8TDD1 881 aaKnown RBP24.76■■□□□ 1.55
CT47A4-201ENST00000415858 IFNL2Q8IZJ0 200 aa24.73■■□□□ 1.55
CT47A4-201ENST00000415858 RSPH6AQ9H0K4 717 aa24.73■■□□□ 1.55
CT47A4-201ENST00000415858 NEFMP07197 916 aa24.72■■□□□ 1.55
CT47A4-201ENST00000415858 HSP90AB1P08238 724 aaKnown RBP24.72■■□□□ 1.55
CT47A4-201ENST00000415858 NKX1-1Q15270 411 aaPredicted RBP24.72■■□□□ 1.55
CT47A4-201ENST00000415858 CYP27B1O15528 508 aa24.71■■□□□ 1.55
CT47A4-201ENST00000415858 WDR43Q15061 677 aaKnown RBP eCLIP24.71■■□□□ 1.55
CT47A4-201ENST00000415858 DIEXFQ68CQ4 756 aaKnown RBP24.71■■□□□ 1.55
CT47A4-201ENST00000415858 PKD1L3Q7Z443 1732 aa24.71■■□□□ 1.55
CT47A4-201ENST00000415858 FAM182BQ5T319 152 aa24.7■■□□□ 1.54
CT47A4-201ENST00000415858 PHKG2P15735 406 aa24.69■■□□□ 1.54
CT47A4-201ENST00000415858 PRKAR2BP31323 418 aa24.69■■□□□ 1.54
CT47A4-201ENST00000415858 C1orf141Q5JVX7 400 aa24.69■■□□□ 1.54
CT47A4-201ENST00000415858 ZNF530Q6P9A1 599 aaPredicted RBP24.69■■□□□ 1.54
CT47A4-201ENST00000415858 GAS2L2Q8NHY3 880 aa24.69■■□□□ 1.54
CT47A4-201ENST00000415858 UPF1Q92900 1129 aaKnown RBP eCLIP24.69■■□□□ 1.54
CT47A4-201ENST00000415858 SF3B2Q13435 895 aaKnown RBP24.67■■□□□ 1.54
CT47A4-201ENST00000415858 BCL11BQ9C0K0 894 aaPredicted RBP24.67■■□□□ 1.54
CT47A4-201ENST00000415858 AKAP4Q5JQC9 854 aa24.66■■□□□ 1.54
CT47A4-201ENST00000415858 DCAF5Q96JK2 942 aa24.66■■□□□ 1.54
CT47A4-201ENST00000415858 MRS2Q9HD23 443 aa24.66■■□□□ 1.54
CT47A4-201ENST00000415858 MTHFSDQ2M296 383 aaKnown RBP24.64■■□□□ 1.54
CT47A4-201ENST00000415858 TRIM37O94972 964 aa24.63■■□□□ 1.53
CT47A4-201ENST00000415858 PLEKHF1Q96S99 279 aa24.63■■□□□ 1.53
CT47A4-201ENST00000415858 SHANK3Q9BYB0 1731 aa24.63■■□□□ 1.53
CT47A4-201ENST00000415858 EP400Q96L91 3159 aa24.62■■□□□ 1.53
CT47A4-201ENST00000415858 CCER2I3L3R5 266 aa24.62■■□□□ 1.53
CT47A4-201ENST00000415858 PNISRQ8TF01 805 aaKnown RBP24.62■■□□□ 1.53
CT47A4-201ENST00000415858 PHACTR3Q96KR7 559 aa24.62■■□□□ 1.53
CT47A4-201ENST00000415858 MAPK8IP3Q9UPT6 1336 aa24.61■■□□□ 1.53
CT47A4-201ENST00000415858 ERVV-2B6SEH9 535 aa24.61■■□□□ 1.53
CT47A4-201ENST00000415858 ADAMTS8Q9UP79 889 aa24.61■■□□□ 1.53
CT47A4-201ENST00000415858 HTATSF1O43719 755 aaKnown RBP24.59■■□□□ 1.53
CT47A4-201ENST00000415858 GNAT3A8MTJ3 354 aa24.58■■□□□ 1.53
CT47A4-201ENST00000415858 BAG6P46379 1132 aa24.58■■□□□ 1.53
CT47A4-201ENST00000415858 PRIM1P49642 420 aaKnown RBP24.58■■□□□ 1.53
CT47A4-201ENST00000415858 CCDC184Q52MB2 194 aa24.58■■□□□ 1.53
CT47A4-201ENST00000415858 RUNDC1Q96C34 613 aa24.58■■□□□ 1.53
CT47A4-201ENST00000415858 ACSBG1Q96GR2 724 aa24.57■■□□□ 1.52
CT47A4-201ENST00000415858 MAP3K5Q99683 1374 aa24.56■■□□□ 1.52
CT47A4-201ENST00000415858 PLSCR1O15162 318 aa24.56■■□□□ 1.52
CT47A4-201ENST00000415858 APBA3O96018 575 aa24.56■■□□□ 1.52
CT47A4-201ENST00000415858 KCNQ2O43526 872 aa24.55■■□□□ 1.52
CT47A4-201ENST00000415858 NFE2L2Q16236 605 aa24.55■■□□□ 1.52
CT47A4-201ENST00000415858 SBF2Q86WG5 1849 aa24.54■■□□□ 1.52
CT47A4-201ENST00000415858 NHSQ6T4R5 1651 aa24.54■■□□□ 1.52
CT47A4-201ENST00000415858 MPRIPQ6WCQ1 1025 aa24.54■■□□□ 1.52
CT47A4-201ENST00000415858 SYTL4Q96C24 671 aaPredicted RBP24.54■■□□□ 1.52
CT47A4-201ENST00000415858 TMOD3Q9NYL9 352 aa24.54■■□□□ 1.52
CT47A4-201ENST00000415858 RTF1Q92541 710 aaKnown RBP24.53■■□□□ 1.52
CT47A4-201ENST00000415858 RNMTO43148 476 aaKnown RBP24.52■■□□□ 1.52
CT47A4-201ENST00000415858 HMGB2P26583 209 aaKnown RBP24.52■■□□□ 1.52
CT47A4-201ENST00000415858 CABP4P57796 275 aa24.52■■□□□ 1.52
CT47A4-201ENST00000415858 KDM6AO15550 1401 aaPredicted RBP24.52■■□□□ 1.52
CT47A4-201ENST00000415858 SMARCC1Q92922 1105 aaPredicted RBP24.51■■□□□ 1.51
CT47A4-201ENST00000415858 LMOD3Q0VAK6 560 aa24.5■■□□□ 1.51
CT47A4-201ENST00000415858 KAT6BQ8WYB5 2073 aa24.49■■□□□ 1.51
CT47A4-201ENST00000415858 PTF1AQ7RTS3 328 aa24.49■■□□□ 1.51
CT47A4-201ENST00000415858 PIGBQ92521 554 aa24.49■■□□□ 1.51
CT47A4-201ENST00000415858 TMPOP42166 694 aaKnown RBP24.48■■□□□ 1.51
CT47A4-201ENST00000415858 IL17REQ8NFR9 667 aa24.48■■□□□ 1.51
CT47A4-201ENST00000415858 DOT1LQ8TEK3 1739 aa24.48■■□□□ 1.51
CT47A4-201ENST00000415858 CEMIPQ8WUJ3 1361 aa24.48■■□□□ 1.51
CT47A4-201ENST00000415858 CAMKK2Q96RR4 588 aa24.48■■□□□ 1.51
CT47A4-201ENST00000415858 SLC52A2Q9HAB3 445 aa24.48■■□□□ 1.51
CT47A4-201ENST00000415858 TNS1Q9HBL0 1735 aaKnown RBP24.48■■□□□ 1.51
CT47A4-201ENST00000415858 LGR6Q9HBX8 967 aa24.48■■□□□ 1.51
CT47A4-201ENST00000415858 NCBP3Q53F19 620 aaKnown RBP24.47■■□□□ 1.51
CT47A4-201ENST00000415858 CCDC146Q8IYE0 955 aa24.47■■□□□ 1.51
CT47A4-201ENST00000415858 ADAMTS7Q9UKP4 1686 aa24.46■■□□□ 1.51
CT47A4-201ENST00000415858 RIPK4P57078 832 aa24.46■■□□□ 1.51
CT47A4-201ENST00000415858 TEFQ10587 303 aa24.46■■□□□ 1.51
CT47A4-201ENST00000415858 MIER1Q8N108 512 aa24.46■■□□□ 1.51
CT47A4-201ENST00000415858 NFATC2IPQ8NCF5 419 aa24.46■■□□□ 1.51
CT47A4-201ENST00000415858 EN1Q05925 392 aaPredicted RBP24.45■■□□□ 1.5
CT47A4-201ENST00000415858 DEFB132Q7Z7B7 95 aa24.45■■□□□ 1.5
CT47A4-201ENST00000415858 MRC1P22897 1456 aa24.45■■□□□ 1.5
CT47A4-201ENST00000415858 SLC27A3Q5K4L6 730 aa24.44■■□□□ 1.5
CT47A4-201ENST00000415858 TOGARAM1Q9Y4F4 1720 aa24.44■■□□□ 1.5
CT47A4-201ENST00000415858 NGEFQ8N5V2 710 aa24.43■■□□□ 1.5
CT47A4-201ENST00000415858 RGPD3A6NKT7 1758 aaPredicted RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms