RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 PCDH11XQ9BZA7 1347 aa15.94■□□□□ 0.14
ATG4B-207ENST00000415107 PCDH11YQ9BZA8 1340 aa15.94■□□□□ 0.14
ATG4B-207ENST00000415107 FCHSD2O94868 740 aa15.94■□□□□ 0.14
ATG4B-207ENST00000415107 PDE3BQ13370 1112 aa15.94■□□□□ 0.14
ATG4B-207ENST00000415107 AMOTQ4VCS5 1084 aa15.94■□□□□ 0.14
ATG4B-207ENST00000415107 AEBP1Q8IUX7 1158 aa15.94■□□□□ 0.14
ATG4B-207ENST00000415107 ZCRB1Q8TBF4 217 aaKnown RBP15.94■□□□□ 0.14
ATG4B-207ENST00000415107 A0A0G2JS52 829 aa15.93■□□□□ 0.14
ATG4B-207ENST00000415107 MYT1Q01538 1121 aa15.93■□□□□ 0.14
ATG4B-207ENST00000415107 RSPH6AQ9H0K4 717 aa15.93■□□□□ 0.14
ATG4B-207ENST00000415107 U2SURPO15042 1029 aaKnown RBP15.92■□□□□ 0.14
ATG4B-207ENST00000415107 MARCH10Q8NA82 808 aaPredicted RBP15.92■□□□□ 0.14
ATG4B-207ENST00000415107 SPG7Q9UQ90 795 aa15.92■□□□□ 0.14
ATG4B-207ENST00000415107 EP400Q96L91 3159 aa15.92■□□□□ 0.14
ATG4B-207ENST00000415107 DIEXFQ68CQ4 756 aaKnown RBP15.91■□□□□ 0.14
ATG4B-207ENST00000415107 FAM196AQ6ZSG2 479 aa15.91■□□□□ 0.14
ATG4B-207ENST00000415107 ADAMTS7Q9UKP4 1686 aa15.91■□□□□ 0.14
ATG4B-207ENST00000415107 NHSQ6T4R5 1651 aa15.9■□□□□ 0.14
ATG4B-207ENST00000415107 SBF2Q86WG5 1849 aa15.9■□□□□ 0.14
ATG4B-207ENST00000415107 U2AF1L5P0DN76 240 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-207ENST00000415107 U2AF1Q01081 240 aaKnown RBP eCLIP15.9■□□□□ 0.14
ATG4B-207ENST00000415107 NKX1-1Q15270 411 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-207ENST00000415107 PLEKHO1Q53GL0 409 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-207ENST00000415107 PNNQ9H307 717 aaKnown RBP15.9■□□□□ 0.14
ATG4B-207ENST00000415107 CYP27B1O15528 508 aa15.89■□□□□ 0.13
ATG4B-207ENST00000415107 HMOX1P09601 288 aa15.89■□□□□ 0.13
ATG4B-207ENST00000415107 CCER2I3L3R5 266 aa15.88■□□□□ 0.13
ATG4B-207ENST00000415107 IFNL2Q8IZJ0 200 aa15.88■□□□□ 0.13
ATG4B-207ENST00000415107 PLEKHF1Q96S99 279 aa15.88■□□□□ 0.13
ATG4B-207ENST00000415107 PHKG2P15735 406 aa15.87■□□□□ 0.13
ATG4B-207ENST00000415107 PRKAR2BP31323 418 aa15.87■□□□□ 0.13
ATG4B-207ENST00000415107 CCDC125Q86Z20 511 aa15.87■□□□□ 0.13
ATG4B-207ENST00000415107 GAS2L2Q8NHY3 880 aa15.87■□□□□ 0.13
ATG4B-207ENST00000415107 TNS1Q9HBL0 1735 aaKnown RBP15.87■□□□□ 0.13
ATG4B-207ENST00000415107 DOT1LQ8TEK3 1739 aa15.86■□□□□ 0.13
ATG4B-207ENST00000415107 TOGARAM1Q9Y4F4 1720 aa15.86■□□□□ 0.13
ATG4B-207ENST00000415107 RGPD3A6NKT7 1758 aaPredicted RBP15.86■□□□□ 0.13
ATG4B-207ENST00000415107 RGPD4Q7Z3J3 1758 aa15.86■□□□□ 0.13
ATG4B-207ENST00000415107 HSP90AB1P08238 724 aaKnown RBP15.86■□□□□ 0.13
ATG4B-207ENST00000415107 PNISRQ8TF01 805 aaKnown RBP15.86■□□□□ 0.13
ATG4B-207ENST00000415107 MRC1P22897 1456 aa15.85■□□□□ 0.13
ATG4B-207ENST00000415107 WDR43Q15061 677 aaKnown RBP eCLIP15.85■□□□□ 0.13
ATG4B-207ENST00000415107 CCDC184Q52MB2 194 aa15.85■□□□□ 0.13
ATG4B-207ENST00000415107 MRS2Q9HD23 443 aa15.85■□□□□ 0.13
ATG4B-207ENST00000415107 MTHFSDQ2M296 383 aaKnown RBP15.84■□□□□ 0.13
ATG4B-207ENST00000415107 AKAP4Q5JQC9 854 aa15.84■□□□□ 0.13
ATG4B-207ENST00000415107 SCN11AQ9UI33 1791 aa15.84■□□□□ 0.13
ATG4B-207ENST00000415107 KDM6AO15550 1401 aaPredicted RBP15.84■□□□□ 0.13
ATG4B-207ENST00000415107 ZNF530Q6P9A1 599 aaPredicted RBP15.83■□□□□ 0.12
ATG4B-207ENST00000415107 DDX54Q8TDD1 881 aaKnown RBP15.83■□□□□ 0.12
ATG4B-207ENST00000415107 DCAF5Q96JK2 942 aa15.83■□□□□ 0.12
ATG4B-207ENST00000415107 NEFMP07197 916 aa15.82■□□□□ 0.12
ATG4B-207ENST00000415107 PHACTR3Q96KR7 559 aa15.82■□□□□ 0.12
ATG4B-207ENST00000415107 BCL11BQ9C0K0 894 aaPredicted RBP15.82■□□□□ 0.12
ATG4B-207ENST00000415107 ADAMTS8Q9UP79 889 aa15.82■□□□□ 0.12
ATG4B-207ENST00000415107 MAP3K5Q99683 1374 aa15.82■□□□□ 0.12
ATG4B-207ENST00000415107 HTATSF1O43719 755 aaKnown RBP15.81■□□□□ 0.12
ATG4B-207ENST00000415107 C1orf141Q5JVX7 400 aa15.81■□□□□ 0.12
ATG4B-207ENST00000415107 CEMIPQ8WUJ3 1361 aa15.81■□□□□ 0.12
ATG4B-207ENST00000415107 UPF1Q92900 1129 aaKnown RBP eCLIP15.81■□□□□ 0.12
ATG4B-207ENST00000415107 ITGB4P16144 1822 aa15.8■□□□□ 0.12
ATG4B-207ENST00000415107 VIRMAQ69YN4 1812 aaKnown RBP15.8■□□□□ 0.12
ATG4B-207ENST00000415107 MAPK8IP3Q9UPT6 1336 aa15.8■□□□□ 0.12
ATG4B-207ENST00000415107 ERVV-2B6SEH9 535 aa15.8■□□□□ 0.12
ATG4B-207ENST00000415107 SOCS7O14512 581 aa15.8■□□□□ 0.12
ATG4B-207ENST00000415107 NCBP3Q53F19 620 aaKnown RBP15.8■□□□□ 0.12
ATG4B-207ENST00000415107 FAM182BQ5T319 152 aa15.8■□□□□ 0.12
ATG4B-207ENST00000415107 RUNDC1Q96C34 613 aa15.8■□□□□ 0.12
ATG4B-207ENST00000415107 BTAF1O14981 1849 aa15.79■□□□□ 0.12
ATG4B-207ENST00000415107 DLG5Q8TDM6 1919 aa15.78■□□□□ 0.12
ATG4B-207ENST00000415107 SIPA1L3O60292 1781 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-207ENST00000415107 GNAT3A8MTJ3 354 aa15.78■□□□□ 0.12
ATG4B-207ENST00000415107 NFE2L2Q16236 605 aa15.78■□□□□ 0.12
ATG4B-207ENST00000415107 PAPPAQ13219 1627 aa15.77■□□□□ 0.12
ATG4B-207ENST00000415107 PLSCR1O15162 318 aa15.77■□□□□ 0.12
ATG4B-207ENST00000415107 TRIM37O94972 964 aa15.76■□□□□ 0.11
ATG4B-207ENST00000415107 LY75O60449 1722 aa15.76■□□□□ 0.11
ATG4B-207ENST00000415107 RNMTO43148 476 aaKnown RBP15.75■□□□□ 0.11
ATG4B-207ENST00000415107 TMPOP42166 694 aaKnown RBP15.75■□□□□ 0.11
ATG4B-207ENST00000415107 MIER1Q8N108 512 aa15.75■□□□□ 0.11
ATG4B-207ENST00000415107 ZNF831Q5JPB2 1677 aa15.75■□□□□ 0.11
ATG4B-207ENST00000415107 RREB1Q92766 1687 aa15.75■□□□□ 0.11
ATG4B-207ENST00000415107 CICQ96RK0 1608 aaPredicted RBP15.75■□□□□ 0.11
ATG4B-207ENST00000415107 KCNQ2O43526 872 aa15.74■□□□□ 0.11
ATG4B-207ENST00000415107 BAG6P46379 1132 aa15.74■□□□□ 0.11
ATG4B-207ENST00000415107 PRIM1P49642 420 aaKnown RBP15.74■□□□□ 0.11
ATG4B-207ENST00000415107 LMOD3Q0VAK6 560 aa15.74■□□□□ 0.11
ATG4B-207ENST00000415107 SF3B2Q13435 895 aaKnown RBP15.74■□□□□ 0.11
ATG4B-207ENST00000415107 MPRIPQ6WCQ1 1025 aa15.74■□□□□ 0.11
ATG4B-207ENST00000415107 NGEFQ8N5V2 710 aa15.73■□□□□ 0.11
ATG4B-207ENST00000415107 IL17REQ8NFR9 667 aa15.73■□□□□ 0.11
ATG4B-207ENST00000415107 ACSBG1Q96GR2 724 aa15.73■□□□□ 0.11
ATG4B-207ENST00000415107 SLC52A2Q9HAB3 445 aa15.73■□□□□ 0.11
ATG4B-207ENST00000415107 TMOD3Q9NYL9 352 aa15.73■□□□□ 0.11
ATG4B-207ENST00000415107 CCDC27Q2M243 656 aa15.72■□□□□ 0.11
ATG4B-207ENST00000415107 RTF1Q92541 710 aaKnown RBP15.72■□□□□ 0.11
ATG4B-207ENST00000415107 PTF1AQ7RTS3 328 aa15.71■□□□□ 0.11
ATG4B-207ENST00000415107 CCDC146Q8IYE0 955 aa15.71■□□□□ 0.11
ATG4B-207ENST00000415107 PIGBQ92521 554 aa15.71■□□□□ 0.11
ATG4B-207ENST00000415107 SMARCC1Q92922 1105 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms