RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 ANKRD36BQ8N2N9 1353 aa22.96■■□□□ 1.27
CPNE1-208ENST00000414711 DDX54Q8TDD1 881 aaKnown RBP22.95■■□□□ 1.26
CPNE1-208ENST00000414711 CICQ96RK0 1608 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-208ENST00000414711 PRIM1P49642 420 aaKnown RBP22.94■■□□□ 1.26
CPNE1-208ENST00000414711 NBPF1Q3BBV0 1214 aa22.94■■□□□ 1.26
CPNE1-208ENST00000414711 KLRG1Q96E93 195 aa22.93■■□□□ 1.26
CPNE1-208ENST00000414711 ZNF692Q9BU19 519 aaPredicted RBP22.93■■□□□ 1.26
CPNE1-208ENST00000414711 JMYQ8N9B5 988 aa22.92■■□□□ 1.26
CPNE1-208ENST00000414711 ANKRD24Q8TF21 1146 aa22.92■■□□□ 1.26
CPNE1-208ENST00000414711 LTN1O94822 1766 aa22.91■■□□□ 1.26
CPNE1-208ENST00000414711 C5P01031 1676 aa22.89■■□□□ 1.25
CPNE1-208ENST00000414711 RAB3GAP2Q9H2M9 1393 aa22.89■■□□□ 1.25
CPNE1-208ENST00000414711 USP54Q70EL1 1684 aa22.87■■□□□ 1.25
CPNE1-208ENST00000414711 EVC2Q86UK5 1308 aa22.87■■□□□ 1.25
CPNE1-208ENST00000414711 HTRA3P83110 453 aa22.87■■□□□ 1.25
CPNE1-208ENST00000414711 USP47Q96K76 1375 aa22.87■■□□□ 1.25
CPNE1-208ENST00000414711 FLAD1Q8NFF5 587 aa22.86■■□□□ 1.25
CPNE1-208ENST00000414711 KTN1Q86UP2 1357 aaKnown RBP22.86■■□□□ 1.25
CPNE1-208ENST00000414711 NMRK2Q9NPI5 230 aa22.85■■□□□ 1.25
CPNE1-208ENST00000414711 USP31Q70CQ4 1352 aa22.85■■□□□ 1.25
CPNE1-208ENST00000414711 RBM46Q8TBY0 533 aaKnown RBP22.84■■□□□ 1.25
CPNE1-208ENST00000414711 FAM208AQ9UK61 1670 aaKnown RBP22.84■■□□□ 1.25
CPNE1-208ENST00000414711 MON2Q7Z3U7 1717 aa22.83■■□□□ 1.25
CPNE1-208ENST00000414711 SLC34A2O95436 690 aa22.81■■□□□ 1.24
CPNE1-208ENST00000414711 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.8■■□□□ 1.24
CPNE1-208ENST00000414711 PCNTO95613 3336 aa22.79■■□□□ 1.24
CPNE1-208ENST00000414711 C16orf71Q8IYS4 520 aaPredicted RBP22.78■■□□□ 1.24
CPNE1-208ENST00000414711 TOGARAM1Q9Y4F4 1720 aa22.78■■□□□ 1.24
CPNE1-208ENST00000414711 TAF1LQ8IZX4 1826 aa22.78■■□□□ 1.24
CPNE1-208ENST00000414711 FSTL1Q12841 308 aa22.77■■□□□ 1.24
CPNE1-208ENST00000414711 NME9Q86XW9 330 aa22.77■■□□□ 1.24
CPNE1-208ENST00000414711 HMGB2P26583 209 aaKnown RBP22.76■■□□□ 1.23
CPNE1-208ENST00000414711 C4BP0C0L5 1744 aa22.76■■□□□ 1.23
CPNE1-208ENST00000414711 ZCRB1Q8TBF4 217 aaKnown RBP22.75■■□□□ 1.23
CPNE1-208ENST00000414711 LTV1Q96GA3 475 aaPredicted RBP22.75■■□□□ 1.23
CPNE1-208ENST00000414711 MEGF6O75095 1541 aa22.75■■□□□ 1.23
CPNE1-208ENST00000414711 PXDNLA1KZ92 1463 aa22.74■■□□□ 1.23
CPNE1-208ENST00000414711 AMIGO3Q86WK7 504 aa22.74■■□□□ 1.23
CPNE1-208ENST00000414711 AK7Q96M32 723 aa22.74■■□□□ 1.23
CPNE1-208ENST00000414711 PALLDQ8WX93 1383 aa22.74■■□□□ 1.23
CPNE1-208ENST00000414711 PHF14O94880 888 aa22.73■■□□□ 1.23
CPNE1-208ENST00000414711 SBNO2Q9Y2G9 1366 aa22.73■■□□□ 1.23
CPNE1-208ENST00000414711 NSD3Q9BZ95 1437 aa22.73■■□□□ 1.23
CPNE1-208ENST00000414711 UBR3Q6ZT12 1888 aa22.71■■□□□ 1.23
CPNE1-208ENST00000414711 IP6K1Q92551 441 aa22.71■■□□□ 1.23
CPNE1-208ENST00000414711 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.7■■□□□ 1.22
CPNE1-208ENST00000414711 HSPA1AP0DMV8 641 aaKnown RBP22.7■■□□□ 1.22
CPNE1-208ENST00000414711 HSPA1BP0DMV9 641 aaKnown RBP22.7■■□□□ 1.22
CPNE1-208ENST00000414711 BCS1LQ9Y276 419 aa22.7■■□□□ 1.22
CPNE1-208ENST00000414711 PLEKHG2Q9H7P9 1386 aa22.7■■□□□ 1.22
CPNE1-208ENST00000414711 KIAA1551Q9HCM1 1747 aa22.7■■□□□ 1.22
CPNE1-208ENST00000414711 ARHGAP27Q6ZUM4 889 aa22.68■■□□□ 1.22
CPNE1-208ENST00000414711 SMIM5Q71RC9 77 aa22.68■■□□□ 1.22
CPNE1-208ENST00000414711 KIF13BQ9NQT8 1826 aa22.68■■□□□ 1.22
CPNE1-208ENST00000414711 CD163L1Q9NR16 1453 aa22.67■■□□□ 1.22
CPNE1-208ENST00000414711 C10orf71Q711Q0 1435 aa22.66■■□□□ 1.22
CPNE1-208ENST00000414711 N4BP2Q86UW6 1770 aaPredicted RBP22.66■■□□□ 1.22
CPNE1-208ENST00000414711 KCPQ6ZWJ8 1503 aa22.66■■□□□ 1.22
CPNE1-208ENST00000414711 SSFA2P28290 1259 aa22.65■■□□□ 1.22
CPNE1-208ENST00000414711 PKD1L3Q7Z443 1732 aa22.65■■□□□ 1.22
CPNE1-208ENST00000414711 KDM2BQ8NHM5 1336 aa22.64■■□□□ 1.22
CPNE1-208ENST00000414711 RGPD2P0DJD1 1756 aa22.64■■□□□ 1.22
CPNE1-208ENST00000414711 C9orf131Q5VYM1 1079 aa22.64■■□□□ 1.21
CPNE1-208ENST00000414711 EDC4Q6P2E9 1401 aaKnown RBP22.64■■□□□ 1.21
CPNE1-208ENST00000414711 TNRC6CQ9HCJ0 1690 aaKnown RBP22.62■■□□□ 1.21
CPNE1-208ENST00000414711 MMP10P09238 476 aa22.62■■□□□ 1.21
CPNE1-208ENST00000414711 TGFB2P61812 414 aa22.62■■□□□ 1.21
CPNE1-208ENST00000414711 SMC1BQ8NDV3 1235 aa22.62■■□□□ 1.21
CPNE1-208ENST00000414711 CGNL1Q0VF96 1302 aa22.61■■□□□ 1.21
CPNE1-208ENST00000414711 A0A0G2JLW4 131 aa22.61■■□□□ 1.21
CPNE1-208ENST00000414711 MPRIPQ6WCQ1 1025 aa22.61■■□□□ 1.21
CPNE1-208ENST00000414711 HOXC9P31274 260 aa22.6■■□□□ 1.21
CPNE1-208ENST00000414711 SMARCC1Q92922 1105 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-208ENST00000414711 FCHSD2O94868 740 aa22.59■■□□□ 1.21
CPNE1-208ENST00000414711 HDGFL2Q7Z4V5 671 aaPredicted RBP22.59■■□□□ 1.21
CPNE1-208ENST00000414711 MAP3K19Q56UN5 1328 aa22.58■■□□□ 1.21
CPNE1-208ENST00000414711 PCDH11XQ9BZA7 1347 aa22.58■■□□□ 1.21
CPNE1-208ENST00000414711 PCDH11YQ9BZA8 1340 aa22.58■■□□□ 1.21
CPNE1-208ENST00000414711 RRAGCQ9HB90 399 aa22.58■■□□□ 1.21
CPNE1-208ENST00000414711 BRCA1P38398 1863 aaKnown RBP22.58■■□□□ 1.2
CPNE1-208ENST00000414711 RAPGEF4Q8WZA2 1011 aa22.57■■□□□ 1.2
CPNE1-208ENST00000414711 DPEP1P16444 411 aa22.56■■□□□ 1.2
CPNE1-208ENST00000414711 AMPHP49418 695 aa22.56■■□□□ 1.2
CPNE1-208ENST00000414711 LINC00116Q8NCU8 138 aa22.56■■□□□ 1.2
CPNE1-208ENST00000414711 GNPATO15228 680 aa22.55■■□□□ 1.2
CPNE1-208ENST00000414711 USHBP1Q8N6Y0 703 aa22.55■■□□□ 1.2
CPNE1-208ENST00000414711 TMC1Q8TDI8 760 aa22.55■■□□□ 1.2
CPNE1-208ENST00000414711 ARFGEF1Q9Y6D6 1849 aa22.54■■□□□ 1.2
CPNE1-208ENST00000414711 RNF181Q9P0P0 153 aa22.54■■□□□ 1.2
CPNE1-208ENST00000414711 MAP2P11137 1827 aaKnown RBP22.54■■□□□ 1.2
CPNE1-208ENST00000414711 ITGB4P16144 1822 aa22.54■■□□□ 1.2
CPNE1-208ENST00000414711 A0A1W2PP64 1363 aa22.53■■□□□ 1.2
CPNE1-208ENST00000414711 ROCK2O75116 1388 aaKnown RBP22.53■■□□□ 1.2
CPNE1-208ENST00000414711 NBPF6Q5VWK0 638 aa22.53■■□□□ 1.2
CPNE1-208ENST00000414711 NBPF4Q96M43 638 aa22.53■■□□□ 1.2
CPNE1-208ENST00000414711 RTL1A6NKG5 1358 aa22.52■■□□□ 1.2
CPNE1-208ENST00000414711 TATP17735 454 aaPredicted RBP22.52■■□□□ 1.2
CPNE1-208ENST00000414711 LOC102724428A0A0B4J2F2 783 aa22.51■■□□□ 1.19
CPNE1-208ENST00000414711 SIK1P57059 783 aa22.51■■□□□ 1.19
CPNE1-208ENST00000414711 CCDC87Q9NVE4 849 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms