RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 POLKQ9UBT6 870 aa21.49■■□□□ 1.03
MCF2L-211ENST00000413354 DOT1LQ8TEK3 1739 aa21.49■■□□□ 1.03
MCF2L-211ENST00000413354 NCAPD2Q15021 1401 aa21.48■■□□□ 1.03
MCF2L-211ENST00000413354 TATP17735 454 aaPredicted RBP21.48■■□□□ 1.03
MCF2L-211ENST00000413354 USHBP1Q8N6Y0 703 aa21.48■■□□□ 1.03
MCF2L-211ENST00000413354 DDX54Q8TDD1 881 aaKnown RBP21.48■■□□□ 1.03
MCF2L-211ENST00000413354 TNNT2P45379 298 aaPredicted RBP21.47■■□□□ 1.03
MCF2L-211ENST00000413354 R3HDM1Q15032 1099 aaKnown RBP21.47■■□□□ 1.03
MCF2L-211ENST00000413354 PTF1AQ7RTS3 328 aa21.47■■□□□ 1.03
MCF2L-211ENST00000413354 MORC1Q86VD1 984 aa21.47■■□□□ 1.03
MCF2L-211ENST00000413354 ACSBG1Q96GR2 724 aa21.47■■□□□ 1.03
MCF2L-211ENST00000413354 PKD1L3Q7Z443 1732 aa21.46■■□□□ 1.03
MCF2L-211ENST00000413354 KCNQ2O43526 872 aa21.45■■□□□ 1.02
MCF2L-211ENST00000413354 PCDH11XQ9BZA7 1347 aa21.43■■□□□ 1.02
MCF2L-211ENST00000413354 PCDH11YQ9BZA8 1340 aa21.43■■□□□ 1.02
MCF2L-211ENST00000413354 AMER1Q5JTC6 1135 aaPredicted RBP21.42■■□□□ 1.02
MCF2L-211ENST00000413354 PLEKHG2Q9H7P9 1386 aa21.4■■□□□ 1.02
MCF2L-211ENST00000413354 EIF4A2Q14240 407 aaKnown RBP21.4■■□□□ 1.02
MCF2L-211ENST00000413354 TXNRD1Q16881 649 aa21.4■■□□□ 1.02
MCF2L-211ENST00000413354 EYA1Q99502 592 aa21.4■■□□□ 1.02
MCF2L-211ENST00000413354 PROM2Q8N271 834 aa21.38■■□□□ 1.01
MCF2L-211ENST00000413354 SYTL4Q96C24 671 aaPredicted RBP21.38■■□□□ 1.01
MCF2L-211ENST00000413354 SPG7Q9UQ90 795 aa21.37■■□□□ 1.01
MCF2L-211ENST00000413354 NPC1L1Q9UHC9 1359 aa21.36■■□□□ 1.01
MCF2L-211ENST00000413354 LY75O60449 1722 aa21.36■■□□□ 1.01
MCF2L-211ENST00000413354 PER1O15534 1290 aaPredicted RBP21.36■■□□□ 1.01
MCF2L-211ENST00000413354 PAPPAQ13219 1627 aa21.36■■□□□ 1.01
MCF2L-211ENST00000413354 IGSF1Q8N6C5 1336 aa21.35■■□□□ 1.01
MCF2L-211ENST00000413354 PRIM1P49642 420 aaKnown RBP21.35■■□□□ 1.01
MCF2L-211ENST00000413354 ANO8Q9HCE9 1232 aaPredicted RBP21.35■■□□□ 1.01
MCF2L-211ENST00000413354 STK32BQ9NY57 414 aa21.35■■□□□ 1.01
MCF2L-211ENST00000413354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.35■■□□□ 1.01
MCF2L-211ENST00000413354 ITGB4P16144 1822 aa21.34■■□□□ 1.01
MCF2L-211ENST00000413354 CASZ1Q86V15 1759 aa21.34■■□□□ 1.01
MCF2L-211ENST00000413354 SRCAPQ6ZRS2 3230 aa21.34■■□□□ 1.01
MCF2L-211ENST00000413354 TOGARAM1Q9Y4F4 1720 aa21.33■■□□□ 1.01
MCF2L-211ENST00000413354 CYP27B1O15528 508 aa21.32■■□□□ 1
MCF2L-211ENST00000413354 SLC27A3Q5K4L6 730 aa21.32■■□□□ 1
MCF2L-211ENST00000413354 CC2D1BQ5T0F9 858 aaKnown RBP21.31■■□□□ 1
MCF2L-211ENST00000413354 QSER1Q2KHR3 1735 aa21.29■■□□□ 1
MCF2L-211ENST00000413354 NKX1-1Q15270 411 aaPredicted RBP21.29■■□□□ 1
MCF2L-211ENST00000413354 SLC15A2Q16348 729 aa21.29■■□□□ 1
MCF2L-211ENST00000413354 IFNL2Q8IZJ0 200 aa21.28■■□□□ 1
MCF2L-211ENST00000413354 HMGB2P26583 209 aaKnown RBP21.27■■□□□ 1
MCF2L-211ENST00000413354 MTHFSP49914 203 aa21.27■■□□□ 1
MCF2L-211ENST00000413354 SPON1Q9HCB6 807 aa21.27■■□□□ 1
MCF2L-211ENST00000413354 KDRP35968 1356 aa21.25■□□□□ 0.99
MCF2L-211ENST00000413354 PHKG2P15735 406 aa21.25■□□□□ 0.99
MCF2L-211ENST00000413354 IL13P35225 146 aa21.25■□□□□ 0.99
MCF2L-211ENST00000413354 AMOTQ4VCS5 1084 aa21.25■□□□□ 0.99
MCF2L-211ENST00000413354 PLEKHO1Q53GL0 409 aaPredicted RBP21.25■□□□□ 0.99
MCF2L-211ENST00000413354 LRRC4BQ9NT99 713 aa21.25■□□□□ 0.99
MCF2L-211ENST00000413354 HSP90AB1P08238 724 aaKnown RBP21.24■□□□□ 0.99
MCF2L-211ENST00000413354 MPRIPQ6WCQ1 1025 aa21.24■□□□□ 0.99
MCF2L-211ENST00000413354 TUBGCP6Q96RT7 1819 aa21.23■□□□□ 0.99
MCF2L-211ENST00000413354 SMARCC1Q92922 1105 aaPredicted RBP21.23■□□□□ 0.99
MCF2L-211ENST00000413354 CCNL1Q9UK58 526 aaPredicted RBP21.23■□□□□ 0.99
MCF2L-211ENST00000413354 C5P01031 1676 aa21.23■□□□□ 0.99
MCF2L-211ENST00000413354 PALLDQ8WX93 1383 aa21.23■□□□□ 0.99
MCF2L-211ENST00000413354 TAF1LQ8IZX4 1826 aa21.22■□□□□ 0.99
MCF2L-211ENST00000413354 SULT6B1Q6IMI4 303 aa21.22■□□□□ 0.99
MCF2L-211ENST00000413354 AEBP1Q8IUX7 1158 aa21.21■□□□□ 0.99
MCF2L-211ENST00000413354 TMOD3Q9NYL9 352 aa21.21■□□□□ 0.99
MCF2L-211ENST00000413354 DIAPH1O60610 1272 aaKnown RBP21.2■□□□□ 0.98
MCF2L-211ENST00000413354 ZNF827Q17R98 1081 aa21.2■□□□□ 0.98
MCF2L-211ENST00000413354 ZNF530Q6P9A1 599 aaPredicted RBP21.2■□□□□ 0.98
MCF2L-211ENST00000413354 AKT1S1Q96B36 256 aa21.2■□□□□ 0.98
MCF2L-211ENST00000413354 PPP1R1BQ9UD71 204 aaPredicted RBP21.2■□□□□ 0.98
MCF2L-211ENST00000413354 CNGB1Q14028 1251 aaPredicted RBP21.19■□□□□ 0.98
MCF2L-211ENST00000413354 C1orf141Q5JVX7 400 aa21.18■□□□□ 0.98
MCF2L-211ENST00000413354 PIGBQ92521 554 aa21.18■□□□□ 0.98
MCF2L-211ENST00000413354 DCAF5Q96JK2 942 aa21.18■□□□□ 0.98
MCF2L-211ENST00000413354 COL3A1P02461 1466 aaPredicted RBP21.18■□□□□ 0.98
MCF2L-211ENST00000413354 ZBTB7AO95365 584 aa21.17■□□□□ 0.98
MCF2L-211ENST00000413354 PDGFDQ9GZP0 370 aaPredicted RBP21.17■□□□□ 0.98
MCF2L-211ENST00000413354 MTFR1LQ9H019 292 aa21.17■□□□□ 0.98
MCF2L-211ENST00000413354 VIRMAQ69YN4 1812 aaKnown RBP21.16■□□□□ 0.98
MCF2L-211ENST00000413354 SCN11AQ9UI33 1791 aa21.16■□□□□ 0.98
MCF2L-211ENST00000413354 ERVV-2B6SEH9 535 aa21.16■□□□□ 0.98
MCF2L-211ENST00000413354 KCNQ4P56696 695 aa21.16■□□□□ 0.98
MCF2L-211ENST00000413354 TFCP2L1Q9NZI6 479 aa21.16■□□□□ 0.98
MCF2L-211ENST00000413354 CFAP53Q96M91 514 aa21.15■□□□□ 0.98
MCF2L-211ENST00000413354 KDM6AO15550 1401 aaPredicted RBP21.14■□□□□ 0.98
MCF2L-211ENST00000413354 C4BP0C0L5 1744 aa21.14■□□□□ 0.97
MCF2L-211ENST00000413354 SLC16A10Q8TF71 515 aa21.13■□□□□ 0.97
MCF2L-211ENST00000413354 ZNF831Q5JPB2 1677 aa21.12■□□□□ 0.97
MCF2L-211ENST00000413354 PNPLA7Q6ZV29 1317 aa21.12■□□□□ 0.97
MCF2L-211ENST00000413354 HMOX1P09601 288 aa21.12■□□□□ 0.97
MCF2L-211ENST00000413354 ATF5Q9Y2D1 282 aaPredicted RBP21.12■□□□□ 0.97
MCF2L-211ENST00000413354 COL24A1Q17RW2 1714 aa21.12■□□□□ 0.97
MCF2L-211ENST00000413354 AKAP4Q5JQC9 854 aa21.11■□□□□ 0.97
MCF2L-211ENST00000413354 LOC102724428A0A0B4J2F2 783 aa21.1■□□□□ 0.97
MCF2L-211ENST00000413354 U2SURPO15042 1029 aaKnown RBP21.1■□□□□ 0.97
MCF2L-211ENST00000413354 PTGER2P43116 358 aa21.1■□□□□ 0.97
MCF2L-211ENST00000413354 SIK1P57059 783 aa21.1■□□□□ 0.97
MCF2L-211ENST00000413354 CABP4P57796 275 aa21.1■□□□□ 0.97
MCF2L-211ENST00000413354 ASAP1Q9ULH1 1129 aa21.1■□□□□ 0.97
MCF2L-211ENST00000413354 UBR3Q6ZT12 1888 aa21.09■□□□□ 0.97
MCF2L-211ENST00000413354 FLAD1Q8NFF5 587 aa21.09■□□□□ 0.97
MCF2L-211ENST00000413354 PPP2R1AP30153 589 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms