RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 NR1H3Q13133 447 aa7.71□□□□□ -1.18
CBX1P3-201ENST00000413296 SLFNL1Q499Z3 407 aa7.71□□□□□ -1.18
CBX1P3-201ENST00000413296 TMC4Q7Z404 712 aa7.71□□□□□ -1.18
CBX1P3-201ENST00000413296 C11orf96Q7Z7L8 435 aa7.71□□□□□ -1.18
CBX1P3-201ENST00000413296 SLF2Q8IX21 1173 aa7.71□□□□□ -1.18
CBX1P3-201ENST00000413296 GNL3LQ9NVN8 582 aaKnown RBP7.71□□□□□ -1.18
CBX1P3-201ENST00000413296 BSDC1Q9NW68 430 aaPredicted RBP7.71□□□□□ -1.18
CBX1P3-201ENST00000413296 CXXC1Q9P0U4 656 aaPredicted RBP7.71□□□□□ -1.18
CBX1P3-201ENST00000413296 VTI1BQ9UEU0 232 aa7.71□□□□□ -1.18
CBX1P3-201ENST00000413296 DDX11L8A8MPP1 907 aa7.7□□□□□ -1.18
CBX1P3-201ENST00000413296 SF3B2Q13435 895 aaKnown RBP7.7□□□□□ -1.18
CBX1P3-201ENST00000413296 VPS37DQ86XT2 251 aa7.7□□□□□ -1.18
CBX1P3-201ENST00000413296 PPARGC1BQ86YN6 1023 aaKnown RBP7.7□□□□□ -1.18
CBX1P3-201ENST00000413296 CERKQ8TCT0 537 aa7.7□□□□□ -1.18
CBX1P3-201ENST00000413296 GTF3C2Q8WUA4 911 aaPredicted RBP7.7□□□□□ -1.18
CBX1P3-201ENST00000413296 MTA3Q9BTC8 594 aa7.7□□□□□ -1.18
CBX1P3-201ENST00000413296 COMMD10Q9Y6G5 202 aa7.7□□□□□ -1.18
CBX1P3-201ENST00000413296 K7ELQ4 463 aaPredicted RBP7.69□□□□□ -1.18
CBX1P3-201ENST00000413296 PDGFRBP09619 1106 aa7.69□□□□□ -1.18
CBX1P3-201ENST00000413296 FDX1P10109 184 aa7.69□□□□□ -1.18
CBX1P3-201ENST00000413296 NCOA4Q13772 614 aa7.69□□□□□ -1.18
CBX1P3-201ENST00000413296 NR6A1Q15406 480 aa7.69□□□□□ -1.18
CBX1P3-201ENST00000413296 MCF2L2Q86YR7 1114 aa7.69□□□□□ -1.18
CBX1P3-201ENST00000413296 PRPF38AQ8NAV1 312 aaKnown RBP7.69□□□□□ -1.18
CBX1P3-201ENST00000413296 FAM174AQ8TBP5 190 aa7.69□□□□□ -1.18
CBX1P3-201ENST00000413296 DUSP9Q99956 384 aaKnown RBP7.69□□□□□ -1.18
CBX1P3-201ENST00000413296 TYW1Q9NV66 732 aaKnown RBP7.69□□□□□ -1.18
CBX1P3-201ENST00000413296 RPS6KL1Q9Y6S9 549 aa7.69□□□□□ -1.18
CBX1P3-201ENST00000413296 PRPF40AO75400 957 aaKnown RBP7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 LDHBP07195 334 aaKnown RBP7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 PRKAR2AP13861 404 aaKnown RBP7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 FMR1Q06787 632 aaKnown RBP eCLIP7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 PSMD2Q13200 908 aa7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 GRIPAP1Q4V328 841 aa7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 WDR78Q5VTH9 848 aa7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 TMC7Q7Z402 723 aa7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 TTC13Q8NBP0 860 aa7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 SLAIN1Q8ND83 568 aa7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 SCYL1Q96KG9 808 aa7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 PRIMPOLQ96LW4 560 aa7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 FRMD6Q96NE9 622 aa7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 RBCK1Q9BYM8 510 aa7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 ANO8Q9HCE9 1232 aaPredicted RBP7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 WWC3Q9ULE0 1092 aa7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 DNMT3AQ9Y6K1 912 aaPredicted RBP7.68□□□□□ -1.18
CBX1P3-201ENST00000413296 DAB2P98082 770 aa7.67□□□□□ -1.18
CBX1P3-201ENST00000413296 AMPD3Q01432 767 aa7.67□□□□□ -1.18
CBX1P3-201ENST00000413296 OS9Q13438 667 aaPredicted RBP7.67□□□□□ -1.18
CBX1P3-201ENST00000413296 OCLNQ16625 522 aa7.67□□□□□ -1.18
CBX1P3-201ENST00000413296 PLEKHG4Q58EX7 1191 aa7.67□□□□□ -1.18
CBX1P3-201ENST00000413296 C8orf48Q96LL4 319 aa7.67□□□□□ -1.18
CBX1P3-201ENST00000413296 PCGF6Q9BYE7 350 aa7.67□□□□□ -1.18
CBX1P3-201ENST00000413296 TMX1Q9H3N1 280 aa7.67□□□□□ -1.18
CBX1P3-201ENST00000413296 TCEAL9Q9UHQ7 104 aa7.67□□□□□ -1.18
CBX1P3-201ENST00000413296 RCCD1A6NED2 376 aa7.66□□□□□ -1.18
CBX1P3-201ENST00000413296 TREHO43280 583 aa7.66□□□□□ -1.18
CBX1P3-201ENST00000413296 GIGYF1O75420 1035 aaPredicted RBP7.66□□□□□ -1.18
CBX1P3-201ENST00000413296 KIF4AO95239 1232 aa7.66□□□□□ -1.18
CBX1P3-201ENST00000413296 ODR4Q5SWX8 454 aa7.66□□□□□ -1.18
CBX1P3-201ENST00000413296 DPY19L2Q6NUT2 758 aa7.66□□□□□ -1.18
CBX1P3-201ENST00000413296 ZNF654Q8IZM8 581 aa7.66□□□□□ -1.18
CBX1P3-201ENST00000413296 OGFOD1Q8N543 542 aa7.66□□□□□ -1.18
CBX1P3-201ENST00000413296 ZNF594Q96JF6 807 aaPredicted RBP7.66□□□□□ -1.18
CBX1P3-201ENST00000413296 SLKQ9H2G2 1235 aaPredicted RBP7.66□□□□□ -1.18
CBX1P3-201ENST00000413296 NACADO15069 1562 aa7.66□□□□□ -1.18
CBX1P3-201ENST00000413296 FGRP09769 529 aa7.65□□□□□ -1.18
CBX1P3-201ENST00000413296 MTMR2Q13614 643 aa7.65□□□□□ -1.18
CBX1P3-201ENST00000413296 MTMR3Q13615 1198 aa7.65□□□□□ -1.18
CBX1P3-201ENST00000413296 ENOX2Q16206 610 aaKnown RBP7.65□□□□□ -1.18
CBX1P3-201ENST00000413296 TYW1BQ6NUM6 668 aa7.65□□□□□ -1.18
CBX1P3-201ENST00000413296 CKAP2LQ8IYA6 745 aa7.65□□□□□ -1.18
CBX1P3-201ENST00000413296 RNPC3Q96LT9 517 aaKnown RBP7.65□□□□□ -1.18
CBX1P3-201ENST00000413296 SENP7Q9BQF6 1050 aa7.65□□□□□ -1.18
CBX1P3-201ENST00000413296 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.65□□□□□ -1.18
CBX1P3-201ENST00000413296 SEPT3Q9UH03 358 aa7.65□□□□□ -1.18
CBX1P3-201ENST00000413296 CCDC189A1A4V9 331 aa7.64□□□□□ -1.19
CBX1P3-201ENST00000413296 FBXO45P0C2W1 286 aa7.64□□□□□ -1.19
CBX1P3-201ENST00000413296 MAPK8P45983 427 aa7.64□□□□□ -1.19
CBX1P3-201ENST00000413296 EVA1CP58658 441 aa7.64□□□□□ -1.19
CBX1P3-201ENST00000413296 USP46P62068 366 aa7.64□□□□□ -1.19
CBX1P3-201ENST00000413296 UBE4AQ14139 1066 aa7.64□□□□□ -1.19
CBX1P3-201ENST00000413296 CCSAPQ6IQ19 270 aaPredicted RBP7.64□□□□□ -1.19
CBX1P3-201ENST00000413296 MAMSTRQ6ZN01 415 aa7.64□□□□□ -1.19
CBX1P3-201ENST00000413296 FAM43BQ6ZT52 329 aaPredicted RBP7.64□□□□□ -1.19
CBX1P3-201ENST00000413296 MKL1Q969V6 931 aa7.64□□□□□ -1.19
CBX1P3-201ENST00000413296 RNF19AQ9NV58 838 aa7.64□□□□□ -1.19
CBX1P3-201ENST00000413296 DDX41Q9UJV9 622 aaKnown RBP7.64□□□□□ -1.19
CBX1P3-201ENST00000413296 PCDHGC3Q9UN70 934 aa7.64□□□□□ -1.19
CBX1P3-201ENST00000413296 TTF2Q9UNY4 1162 aaKnown RBP7.64□□□□□ -1.19
CBX1P3-201ENST00000413296 PCDHGA10Q9Y5H3 936 aa7.64□□□□□ -1.19
CBX1P3-201ENST00000413296 CFAP99D6REC4 459 aa7.63□□□□□ -1.19
CBX1P3-201ENST00000413296 EXOC5O00471 708 aa7.63□□□□□ -1.19
CBX1P3-201ENST00000413296 LIG1P18858 919 aa7.63□□□□□ -1.19
CBX1P3-201ENST00000413296 GYS2P54840 703 aa7.63□□□□□ -1.19
CBX1P3-201ENST00000413296 SAFB2Q14151 953 aaKnown RBP eCLIP7.63□□□□□ -1.19
CBX1P3-201ENST00000413296 NBPF6Q5VWK0 638 aa7.63□□□□□ -1.19
CBX1P3-201ENST00000413296 NBPF4Q96M43 638 aa7.63□□□□□ -1.19
CBX1P3-201ENST00000413296 EMILIN1Q9Y6C2 1016 aa7.63□□□□□ -1.19
CBX1P3-201ENST00000413296 ZBBXA8MT70 800 aa7.62□□□□□ -1.19
CBX1P3-201ENST00000413296 RACK1P63244 317 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms