RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 MARCH10Q8NA82 808 aaPredicted RBP18.78■□□□□ 0.6
CPNE1-206ENST00000412056 PRKRIP1Q9H875 184 aaPredicted RBP18.78■□□□□ 0.6
CPNE1-206ENST00000412056 MYBBP1AQ9BQG0 1328 aaKnown RBP18.77■□□□□ 0.6
CPNE1-206ENST00000412056 DOT1LQ8TEK3 1739 aa18.77■□□□□ 0.59
CPNE1-206ENST00000412056 SULT6B1Q6IMI4 303 aa18.76■□□□□ 0.59
CPNE1-206ENST00000412056 UPF1Q92900 1129 aaKnown RBP eCLIP18.76■□□□□ 0.59
CPNE1-206ENST00000412056 KDRP35968 1356 aa18.76■□□□□ 0.59
CPNE1-206ENST00000412056 ZCRB1Q8TBF4 217 aaKnown RBP18.75■□□□□ 0.59
CPNE1-206ENST00000412056 U2SURPO15042 1029 aaKnown RBP18.74■□□□□ 0.59
CPNE1-206ENST00000412056 HMOX1P09601 288 aa18.74■□□□□ 0.59
CPNE1-206ENST00000412056 FAM196AQ6ZSG2 479 aa18.74■□□□□ 0.59
CPNE1-206ENST00000412056 VIRMAQ69YN4 1812 aaKnown RBP18.74■□□□□ 0.59
CPNE1-206ENST00000412056 NHSQ6T4R5 1651 aa18.73■□□□□ 0.59
CPNE1-206ENST00000412056 DDX54Q8TDD1 881 aaKnown RBP18.73■□□□□ 0.59
CPNE1-206ENST00000412056 TOGARAM1Q9Y4F4 1720 aa18.72■□□□□ 0.59
CPNE1-206ENST00000412056 BCL9O00512 1426 aa18.72■□□□□ 0.59
CPNE1-206ENST00000412056 PCDH11XQ9BZA7 1347 aa18.72■□□□□ 0.59
CPNE1-206ENST00000412056 PCDH11YQ9BZA8 1340 aa18.72■□□□□ 0.59
CPNE1-206ENST00000412056 PLEKHG2Q9H7P9 1386 aa18.7■□□□□ 0.58
CPNE1-206ENST00000412056 ITGB4P16144 1822 aa18.7■□□□□ 0.58
CPNE1-206ENST00000412056 NUDCQ9Y266 331 aa18.7■□□□□ 0.58
CPNE1-206ENST00000412056 BTAF1O14981 1849 aa18.7■□□□□ 0.58
CPNE1-206ENST00000412056 CYP27B1O15528 508 aa18.69■□□□□ 0.58
CPNE1-206ENST00000412056 TRIM37O94972 964 aa18.69■□□□□ 0.58
CPNE1-206ENST00000412056 SPG7Q9UQ90 795 aa18.69■□□□□ 0.58
CPNE1-206ENST00000412056 ANP32CO43423 234 aa18.68■□□□□ 0.58
CPNE1-206ENST00000412056 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.68■□□□□ 0.581e-6■■□□□ 12.2
CPNE1-206ENST00000412056 U2AF1L5P0DN76 240 aaPredicted RBP18.67■□□□□ 0.58
CPNE1-206ENST00000412056 U2AF1Q01081 240 aaKnown RBP eCLIP18.67■□□□□ 0.582e-6■□□□□ 8.5
CPNE1-206ENST00000412056 PLEKHO1Q53GL0 409 aaPredicted RBP18.67■□□□□ 0.58
CPNE1-206ENST00000412056 ACSBG1Q96GR2 724 aa18.67■□□□□ 0.58
CPNE1-206ENST00000412056 PTF1AQ7RTS3 328 aa18.66■□□□□ 0.58
CPNE1-206ENST00000412056 SCN11AQ9UI33 1791 aa18.65■□□□□ 0.58
CPNE1-206ENST00000412056 ZNF530Q6P9A1 599 aaPredicted RBP18.65■□□□□ 0.58
CPNE1-206ENST00000412056 CCDC125Q86Z20 511 aa18.65■□□□□ 0.58
CPNE1-206ENST00000412056 RSPH6AQ9H0K4 717 aa18.65■□□□□ 0.58
CPNE1-206ENST00000412056 KCNQ2O43526 872 aa18.64■□□□□ 0.57
CPNE1-206ENST00000412056 PHKG2P15735 406 aa18.64■□□□□ 0.57
CPNE1-206ENST00000412056 PRKAR2BP31323 418 aa18.64■□□□□ 0.57
CPNE1-206ENST00000412056 SF3B2Q13435 895 aaKnown RBP18.64■□□□□ 0.57
CPNE1-206ENST00000412056 AMOTQ4VCS5 1084 aa18.64■□□□□ 0.57
CPNE1-206ENST00000412056 DLG5Q8TDM6 1919 aa18.64■□□□□ 0.57
CPNE1-206ENST00000412056 EP400Q96L91 3159 aa18.64■□□□□ 0.57
CPNE1-206ENST00000412056 RGPD3A6NKT7 1758 aaPredicted RBP18.63■□□□□ 0.57
CPNE1-206ENST00000412056 RGPD4Q7Z3J3 1758 aa18.63■□□□□ 0.57
CPNE1-206ENST00000412056 DEFB132Q7Z7B7 95 aa18.63■□□□□ 0.57
CPNE1-206ENST00000412056 IFNL2Q8IZJ0 200 aa18.63■□□□□ 0.57
CPNE1-206ENST00000412056 CCDC184Q52MB2 194 aa18.62■□□□□ 0.57
CPNE1-206ENST00000412056 RREB1Q92766 1687 aa18.61■□□□□ 0.57
CPNE1-206ENST00000412056 KDM6AO15550 1401 aaPredicted RBP18.61■□□□□ 0.57
CPNE1-206ENST00000412056 NKX1-1Q15270 411 aaPredicted RBP18.61■□□□□ 0.57
CPNE1-206ENST00000412056 BCL11BQ9C0K0 894 aaPredicted RBP18.61■□□□□ 0.57
CPNE1-206ENST00000412056 ADAMTS7Q9UKP4 1686 aa18.6■□□□□ 0.57
CPNE1-206ENST00000412056 FCHSD2O94868 740 aa18.6■□□□□ 0.57
CPNE1-206ENST00000412056 APBA3O96018 575 aa18.6■□□□□ 0.57
CPNE1-206ENST00000412056 BAG6P46379 1132 aa18.6■□□□□ 0.57
CPNE1-206ENST00000412056 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
CPNE1-206ENST00000412056 C1orf141Q5JVX7 400 aa18.6■□□□□ 0.57
CPNE1-206ENST00000412056 PRIM1P49642 420 aaKnown RBP18.59■□□□□ 0.57
CPNE1-206ENST00000412056 SYTL4Q96C24 671 aaPredicted RBP18.59■□□□□ 0.57
CPNE1-206ENST00000412056 PHACTR3Q96KR7 559 aa18.59■□□□□ 0.57
CPNE1-206ENST00000412056 NUP188Q5SRE5 1749 aa18.58■□□□□ 0.57
CPNE1-206ENST00000412056 EN1Q05925 392 aaPredicted RBP18.58■□□□□ 0.56
CPNE1-206ENST00000412056 AKAP4Q5JQC9 854 aa18.57■□□□□ 0.56
CPNE1-206ENST00000412056 LY75O60449 1722 aa18.57■□□□□ 0.56
CPNE1-206ENST00000412056 HSP90AB1P08238 724 aaKnown RBP18.56■□□□□ 0.56
CPNE1-206ENST00000412056 WDR43Q15061 677 aaKnown RBP eCLIP18.56■□□□□ 0.56
CPNE1-206ENST00000412056 GAS2L2Q8NHY3 880 aa18.56■□□□□ 0.56
CPNE1-206ENST00000412056 DCAF5Q96JK2 942 aa18.56■□□□□ 0.56
CPNE1-206ENST00000412056 PLEKHF1Q96S99 279 aa18.56■□□□□ 0.56
CPNE1-206ENST00000412056 EZH2Q15910 746 aaKnown RBP18.55■□□□□ 0.56
CPNE1-206ENST00000412056 MPRIPQ6WCQ1 1025 aa18.55■□□□□ 0.56
CPNE1-206ENST00000412056 SIPA1L3O60292 1781 aaPredicted RBP18.55■□□□□ 0.56
CPNE1-206ENST00000412056 MAP3K5Q99683 1374 aa18.55■□□□□ 0.56
CPNE1-206ENST00000412056 CAMKK2Q96RR4 588 aa18.54■□□□□ 0.56
CPNE1-206ENST00000412056 MRS2Q9HD23 443 aa18.54■□□□□ 0.56
CPNE1-206ENST00000412056 MRC1P22897 1456 aa18.53■□□□□ 0.56
CPNE1-206ENST00000412056 ADAMTS8Q9UP79 889 aa18.53■□□□□ 0.56
CPNE1-206ENST00000412056 PLSCR1O15162 318 aa18.52■□□□□ 0.56
CPNE1-206ENST00000412056 RNMTO43148 476 aaKnown RBP18.52■□□□□ 0.56
CPNE1-206ENST00000412056 CCDC146Q8IYE0 955 aa18.52■□□□□ 0.56
CPNE1-206ENST00000412056 PIGBQ92521 554 aa18.52■□□□□ 0.56
CPNE1-206ENST00000412056 LGR6Q9HBX8 967 aa18.52■□□□□ 0.56
CPNE1-206ENST00000412056 NEFMP07197 916 aa18.51■□□□□ 0.55
CPNE1-206ENST00000412056 DIEXFQ68CQ4 756 aaKnown RBP18.51■□□□□ 0.55
CPNE1-206ENST00000412056 PNNQ9H307 717 aaKnown RBP18.51■□□□□ 0.55
CPNE1-206ENST00000412056 TMOD3Q9NYL9 352 aa18.51■□□□□ 0.55
CPNE1-206ENST00000412056 PAPPAQ13219 1627 aa18.51■□□□□ 0.55
CPNE1-206ENST00000412056 MAPK8IP3Q9UPT6 1336 aa18.5■□□□□ 0.55
CPNE1-206ENST00000412056 GNAT3A8MTJ3 354 aa18.5■□□□□ 0.55
CPNE1-206ENST00000412056 ERVV-2B6SEH9 535 aa18.5■□□□□ 0.55
CPNE1-206ENST00000412056 TAF1LQ8IZX4 1826 aa18.5■□□□□ 0.55
CPNE1-206ENST00000412056 CABP4P57796 275 aa18.49■□□□□ 0.55
CPNE1-206ENST00000412056 NFE2L2Q16236 605 aa18.48■□□□□ 0.55
CPNE1-206ENST00000412056 PROM2Q8N271 834 aa18.48■□□□□ 0.55
CPNE1-206ENST00000412056 PALLDQ8WX93 1383 aa18.47■□□□□ 0.55
CPNE1-206ENST00000412056 TXNRD1Q16881 649 aa18.47■□□□□ 0.55
CPNE1-206ENST00000412056 IL17REQ8NFR9 667 aa18.47■□□□□ 0.55
CPNE1-206ENST00000412056 PNISRQ8TF01 805 aaKnown RBP18.47■□□□□ 0.55
CPNE1-206ENST00000412056 RUNDC1Q96C34 613 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms