RNA–Protein interactions for RNA: ENST00000411373.1

RN7SKP30-201, Transcript of RNA, 7SK small nuclear pseudogene 30, humanhuman

BASIC

Gene RN7SKP30, Length 334 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP30-201ENST00000411373 ZCRB1Q8TBF4 217 aaKnown RBP10.27□□□□□ -0.77
RN7SKP30-201ENST00000411373 USP54Q70EL1 1684 aa10.27□□□□□ -0.77
RN7SKP30-201ENST00000411373 USP47Q96K76 1375 aa10.26□□□□□ -0.77
RN7SKP30-201ENST00000411373 TUBGCP6Q96RT7 1819 aa10.26□□□□□ -0.77
RN7SKP30-201ENST00000411373 MSL1Q68DK7 614 aa10.26□□□□□ -0.77
RN7SKP30-201ENST00000411373 RGPD2P0DJD1 1756 aa10.26□□□□□ -0.77
RN7SKP30-201ENST00000411373 A0A1W2PP64 1363 aa10.26□□□□□ -0.77
RN7SKP30-201ENST00000411373 ANKRD36BQ8N2N9 1353 aa10.26□□□□□ -0.77
RN7SKP30-201ENST00000411373 RAPGEF4Q8WZA2 1011 aa10.25□□□□□ -0.77
RN7SKP30-201ENST00000411373 CD163L1Q9NR16 1453 aa10.24□□□□□ -0.77
RN7SKP30-201ENST00000411373 TATP17735 454 aaPredicted RBP10.24□□□□□ -0.77
RN7SKP30-201ENST00000411373 FBLN1P23142 703 aa10.24□□□□□ -0.77
RN7SKP30-201ENST00000411373 HMGB2P26583 209 aaKnown RBP10.24□□□□□ -0.77
RN7SKP30-201ENST00000411373 HOXC9P31274 260 aa10.24□□□□□ -0.77
RN7SKP30-201ENST00000411373 USHBP1Q8N6Y0 703 aa10.24□□□□□ -0.77
RN7SKP30-201ENST00000411373 TONSLQ96HA7 1378 aa10.24□□□□□ -0.77
RN7SKP30-201ENST00000411373 LY75O60449 1722 aa10.24□□□□□ -0.77
RN7SKP30-201ENST00000411373 SMG6Q86US8 1419 aaKnown RBP10.24□□□□□ -0.77
RN7SKP30-201ENST00000411373 COL23A1Q86Y22 540 aaPredicted RBP10.23□□□□□ -0.77
RN7SKP30-201ENST00000411373 ZNF526Q8TF50 670 aaPredicted RBP10.23□□□□□ -0.77
RN7SKP30-201ENST00000411373 MAP3K19Q56UN5 1328 aa10.23□□□□□ -0.77
RN7SKP30-201ENST00000411373 YBX3P16989 372 aaKnown RBP eCLIP10.22□□□□□ -0.77
RN7SKP30-201ENST00000411373 RRS1Q15050 365 aaKnown RBP10.22□□□□□ -0.77
RN7SKP30-201ENST00000411373 MPRIPQ6WCQ1 1025 aa10.22□□□□□ -0.77
RN7SKP30-201ENST00000411373 FLAD1Q8NFF5 587 aa10.22□□□□□ -0.77
RN7SKP30-201ENST00000411373 GPBP1L1Q9HC44 474 aaPredicted RBP10.22□□□□□ -0.77
RN7SKP30-201ENST00000411373 SLC24A1O60721 1099 aa10.21□□□□□ -0.77
RN7SKP30-201ENST00000411373 AK7Q96M32 723 aa10.21□□□□□ -0.77
RN7SKP30-201ENST00000411373 WWC3Q9ULE0 1092 aa10.21□□□□□ -0.77
RN7SKP30-201ENST00000411373 ST20-MTHFSA0A0A6YYL1 179 aa10.2□□□□□ -0.78
RN7SKP30-201ENST00000411373 MEGF6O75095 1541 aa10.2□□□□□ -0.78
RN7SKP30-201ENST00000411373 PHF14O94880 888 aa10.2□□□□□ -0.78
RN7SKP30-201ENST00000411373 C5P01031 1676 aa10.2□□□□□ -0.78
RN7SKP30-201ENST00000411373 COL24A1Q17RW2 1714 aa10.2□□□□□ -0.78
RN7SKP30-201ENST00000411373 IFFO2Q5TF58 517 aa10.2□□□□□ -0.78
RN7SKP30-201ENST00000411373 NBPF6Q5VWK0 638 aa10.2□□□□□ -0.78
RN7SKP30-201ENST00000411373 NBPF4Q96M43 638 aa10.2□□□□□ -0.78
RN7SKP30-201ENST00000411373 PUS7Q96PZ0 661 aaKnown RBP10.2□□□□□ -0.78
RN7SKP30-201ENST00000411373 SHANK3Q9BYB0 1731 aa10.2□□□□□ -0.78
RN7SKP30-201ENST00000411373 GGNBP2Q9H3C7 697 aa10.2□□□□□ -0.78
RN7SKP30-201ENST00000411373 ATP10DQ9P241 1426 aa10.19□□□□□ -0.78
RN7SKP30-201ENST00000411373 NSD2O96028 1365 aa10.19□□□□□ -0.78
RN7SKP30-201ENST00000411373 CGNL1Q0VF96 1302 aa10.19□□□□□ -0.78
RN7SKP30-201ENST00000411373 PCDH11XQ9BZA7 1347 aa10.19□□□□□ -0.78
RN7SKP30-201ENST00000411373 PCDH11YQ9BZA8 1340 aa10.19□□□□□ -0.78
RN7SKP30-201ENST00000411373 CD2APQ9Y5K6 639 aa10.19□□□□□ -0.78
RN7SKP30-201ENST00000411373 PALLDQ8WX93 1383 aa10.18□□□□□ -0.78
RN7SKP30-201ENST00000411373 PPM1GO15355 546 aaPredicted RBP10.18□□□□□ -0.78
RN7SKP30-201ENST00000411373 SMARCC1Q92922 1105 aaPredicted RBP10.18□□□□□ -0.78
RN7SKP30-201ENST00000411373 RTL1A6NKG5 1358 aa10.17□□□□□ -0.78
RN7SKP30-201ENST00000411373 TMF1P82094 1093 aa10.17□□□□□ -0.78
RN7SKP30-201ENST00000411373 IGSF1Q8N6C5 1336 aa10.16□□□□□ -0.78
RN7SKP30-201ENST00000411373 TAF1LQ8IZX4 1826 aa10.16□□□□□ -0.78
RN7SKP30-201ENST00000411373 ITGB4P16144 1822 aa10.15□□□□□ -0.78
RN7SKP30-201ENST00000411373 KIF20BQ96Q89 1820 aa10.15□□□□□ -0.78
RN7SKP30-201ENST00000411373 FYB1O15117 783 aa10.15□□□□□ -0.78
RN7SKP30-201ENST00000411373 HSP90AB2PQ58FF8 381 aa10.15□□□□□ -0.78
RN7SKP30-201ENST00000411373 SPG7Q9UQ90 795 aa10.15□□□□□ -0.78
RN7SKP30-201ENST00000411373 C4BP0C0L5 1744 aa10.15□□□□□ -0.78
RN7SKP30-201ENST00000411373 NSD3Q9BZ95 1437 aa10.15□□□□□ -0.79
RN7SKP30-201ENST00000411373 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.14□□□□□ -0.79
RN7SKP30-201ENST00000411373 HSPA6P17066 643 aa10.14□□□□□ -0.79
RN7SKP30-201ENST00000411373 SMIM5Q71RC9 77 aa10.14□□□□□ -0.79
RN7SKP30-201ENST00000411373 TMOD3Q9NYL9 352 aa10.14□□□□□ -0.79
RN7SKP30-201ENST00000411373 INSRP06213 1382 aa10.14□□□□□ -0.79
RN7SKP30-201ENST00000411373 FLT4P35916 1363 aa10.14□□□□□ -0.79
RN7SKP30-201ENST00000411373 GNPATO15228 680 aa10.13□□□□□ -0.79
RN7SKP30-201ENST00000411373 ATP6V1AP38606 617 aa10.13□□□□□ -0.79
RN7SKP30-201ENST00000411373 CDCA8Q53HL2 280 aa10.13□□□□□ -0.79
RN7SKP30-201ENST00000411373 TESK2Q96S53 571 aa10.13□□□□□ -0.79
RN7SKP30-201ENST00000411373 POLR3GLQ9BT43 218 aa10.13□□□□□ -0.79
RN7SKP30-201ENST00000411373 CYP27B1O15528 508 aa10.12□□□□□ -0.79
RN7SKP30-201ENST00000411373 SSFA2P28290 1259 aa10.12□□□□□ -0.79
RN7SKP30-201ENST00000411373 PIGBQ92521 554 aa10.12□□□□□ -0.79
RN7SKP30-201ENST00000411373 UTRNP46939 3433 aa10.12□□□□□ -0.79
RN7SKP30-201ENST00000411373 UBR3Q6ZT12 1888 aa10.11□□□□□ -0.79
RN7SKP30-201ENST00000411373 LOC102724428A0A0B4J2F2 783 aa10.11□□□□□ -0.79
RN7SKP30-201ENST00000411373 SIK1P57059 783 aa10.11□□□□□ -0.79
RN7SKP30-201ENST00000411373 BCS1LQ9Y276 419 aa10.11□□□□□ -0.79
RN7SKP30-201ENST00000411373 EMILIN1Q9Y6C2 1016 aa10.11□□□□□ -0.79
RN7SKP30-201ENST00000411373 TOGARAM1Q9Y4F4 1720 aa10.1□□□□□ -0.79
RN7SKP30-201ENST00000411373 ARHGAP27Q6ZUM4 889 aa10.1□□□□□ -0.79
RN7SKP30-201ENST00000411373 C16orf71Q8IYS4 520 aaPredicted RBP10.1□□□□□ -0.79
RN7SKP30-201ENST00000411373 LINC00116Q8NCU8 138 aa10.1□□□□□ -0.79
RN7SKP30-201ENST00000411373 RBM42Q9BTD8 480 aaKnown RBP10.1□□□□□ -0.79
RN7SKP30-201ENST00000411373 MMP10P09238 476 aa10.09□□□□□ -0.79
RN7SKP30-201ENST00000411373 TRAPPC3LQ5T215 181 aa10.09□□□□□ -0.79
RN7SKP30-201ENST00000411373 IFNL2Q8IZJ0 200 aa10.09□□□□□ -0.79
RN7SKP30-201ENST00000411373 ASAP1Q9ULH1 1129 aa10.09□□□□□ -0.79
RN7SKP30-201ENST00000411373 RTCBQ9Y3I0 505 aaKnown RBP10.09□□□□□ -0.79
RN7SKP30-201ENST00000411373 KIF24Q5T7B8 1368 aa10.09□□□□□ -0.79
RN7SKP30-201ENST00000411373 PKD1L3Q7Z443 1732 aa10.08□□□□□ -0.8
RN7SKP30-201ENST00000411373 MAP2P11137 1827 aaKnown RBP10.08□□□□□ -0.8
RN7SKP30-201ENST00000411373 FCHSD2O94868 740 aa10.08□□□□□ -0.8
RN7SKP30-201ENST00000411373 TNNT2P45379 298 aaPredicted RBP10.08□□□□□ -0.8
RN7SKP30-201ENST00000411373 AMIGO3Q86WK7 504 aa10.08□□□□□ -0.8
RN7SKP30-201ENST00000411373 CCDC87Q9NVE4 849 aa10.08□□□□□ -0.8
RN7SKP30-201ENST00000411373 PARP3Q9Y6F1 533 aa10.08□□□□□ -0.8
RN7SKP30-201ENST00000411373 N4BP2Q86UW6 1770 aaPredicted RBP10.08□□□□□ -0.8
RN7SKP30-201ENST00000411373 ADCY9O60503 1353 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms