RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 TSR1Q2NL82 804 aaKnown RBP1.39□□□□□ -2.19
RNU4-88P-201ENST00000411220 AMIGO3Q86WK7 504 aa1.39□□□□□ -2.19
RNU4-88P-201ENST00000411220 SLC16A11Q8NCK7 471 aa1.39□□□□□ -2.19
RNU4-88P-201ENST00000411220 CERKQ8TCT0 537 aa1.39□□□□□ -2.19
RNU4-88P-201ENST00000411220 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.39□□□□□ -2.19
RNU4-88P-201ENST00000411220 SPTLC1O15269 473 aa1.38□□□□□ -2.19
RNU4-88P-201ENST00000411220 LMO1P25800 156 aa1.38□□□□□ -2.19
RNU4-88P-201ENST00000411220 ZXDAP98168 799 aa1.38□□□□□ -2.19
RNU4-88P-201ENST00000411220 GRIK4Q16099 956 aa1.38□□□□□ -2.19
RNU4-88P-201ENST00000411220 SKOR2Q2VWA4 1001 aaPredicted RBP1.38□□□□□ -2.19
RNU4-88P-201ENST00000411220 CHSY3Q70JA7 882 aa1.38□□□□□ -2.19
RNU4-88P-201ENST00000411220 FAM84AQ96KN4 292 aa1.38□□□□□ -2.19
RNU4-88P-201ENST00000411220 SPINT1O43278 529 aa1.37□□□□□ -2.19
RNU4-88P-201ENST00000411220 NRG1Q02297 640 aaPredicted RBP1.37□□□□□ -2.19
RNU4-88P-201ENST00000411220 DBN1Q16643 649 aa1.37□□□□□ -2.19
RNU4-88P-201ENST00000411220 MYRFQ9Y2G1 1151 aa1.37□□□□□ -2.19
RNU4-88P-201ENST00000411220 KDM2AQ9Y2K7 1162 aa1.37□□□□□ -2.19
RNU4-88P-201ENST00000411220 FAM229AH3BQW9 127 aa1.36□□□□□ -2.19
RNU4-88P-201ENST00000411220 MAP3K7O43318 606 aa1.36□□□□□ -2.19
RNU4-88P-201ENST00000411220 MMP16P51512 607 aa1.36□□□□□ -2.19
RNU4-88P-201ENST00000411220 NBPF20Q3BBV1 942 aa1.36□□□□□ -2.19
RNU4-88P-201ENST00000411220 PPP1R15BQ5SWA1 713 aa1.36□□□□□ -2.19
RNU4-88P-201ENST00000411220 NBPF10Q6P3W6 841 aaKnown RBP1.36□□□□□ -2.19
RNU4-88P-201ENST00000411220 PRR23CQ6ZRP0 262 aa1.36□□□□□ -2.19
RNU4-88P-201ENST00000411220 ANKLE2Q86XL3 938 aa1.36□□□□□ -2.19
RNU4-88P-201ENST00000411220 CCDC24Q8N4L8 307 aa1.36□□□□□ -2.19
RNU4-88P-201ENST00000411220 GGA1Q9UJY5 639 aa1.36□□□□□ -2.19
RNU4-88P-201ENST00000411220 PPP1R37O75864 691 aa1.35□□□□□ -2.19
RNU4-88P-201ENST00000411220 PAPLNO95428 1278 aa1.35□□□□□ -2.19
RNU4-88P-201ENST00000411220 ITGB6P18564 788 aa1.35□□□□□ -2.19
RNU4-88P-201ENST00000411220 TRIM28Q13263 835 aaKnown RBP1.35□□□□□ -2.19
RNU4-88P-201ENST00000411220 MRIQ9BWK5 157 aa1.35□□□□□ -2.19
RNU4-88P-201ENST00000411220 H7C1W4 665 aa1.34□□□□□ -2.19
RNU4-88P-201ENST00000411220 VGFO15240 615 aaPredicted RBP1.34□□□□□ -2.19
RNU4-88P-201ENST00000411220 TSPAN15O95858 294 aa1.34□□□□□ -2.19
RNU4-88P-201ENST00000411220 EN1Q05925 392 aaPredicted RBP1.34□□□□□ -2.19
RNU4-88P-201ENST00000411220 ZNF575Q86XF7 245 aa1.34□□□□□ -2.19
RNU4-88P-201ENST00000411220 RNF135Q8IUD6 432 aa1.34□□□□□ -2.19
RNU4-88P-201ENST00000411220 SALL2Q9Y467 1007 aaPredicted RBP1.34□□□□□ -2.19
RNU4-88P-201ENST00000411220 PCSK5Q92824 1860 aa1.33□□□□□ -2.2
RNU4-88P-201ENST00000411220 A0A0G2JLL6 359 aaPredicted RBP1.33□□□□□ -2.2
RNU4-88P-201ENST00000411220 FSHBP01225 129 aa1.33□□□□□ -2.2
RNU4-88P-201ENST00000411220 MESP2Q0VG99 397 aa1.33□□□□□ -2.2
RNU4-88P-201ENST00000411220 NFIXQ14938 502 aa1.33□□□□□ -2.2
RNU4-88P-201ENST00000411220 CDCP2Q5VXM1 449 aa1.33□□□□□ -2.2
RNU4-88P-201ENST00000411220 KLHL34Q8N239 644 aa1.33□□□□□ -2.2
RNU4-88P-201ENST00000411220 RBM27Q9P2N5 1060 aaKnown RBP1.33□□□□□ -2.2
RNU4-88P-201ENST00000411220 SALL3Q9BXA9 1300 aa1.33□□□□□ -2.2
RNU4-88P-201ENST00000411220 ATP5J2-PTCD1G3V325 749 aa1.32□□□□□ -2.2
RNU4-88P-201ENST00000411220 PTCD1O75127 700 aaKnown RBP1.32□□□□□ -2.2
RNU4-88P-201ENST00000411220 SH3BP2P78314 561 aa1.32□□□□□ -2.2
RNU4-88P-201ENST00000411220 MORN1Q5T089 497 aa1.32□□□□□ -2.2
RNU4-88P-201ENST00000411220 PRPF38BQ5VTL8 546 aaKnown RBP1.32□□□□□ -2.2
RNU4-88P-201ENST00000411220 BRICD5Q6PL45 260 aa1.32□□□□□ -2.2
RNU4-88P-201ENST00000411220 RIPOR1Q6ZS17 1223 aa1.32□□□□□ -2.2
RNU4-88P-201ENST00000411220 ZSCAN10Q96SZ4 725 aaPredicted RBP1.32□□□□□ -2.2
RNU4-88P-201ENST00000411220 CARMIL2Q6F5E8 1435 aa1.32□□□□□ -2.2
RNU4-88P-201ENST00000411220 GRIN3BO60391 1043 aa1.31□□□□□ -2.2
RNU4-88P-201ENST00000411220 LILRB3O75022 631 aa1.31□□□□□ -2.2
RNU4-88P-201ENST00000411220 NR3C2P08235 984 aa1.31□□□□□ -2.2
RNU4-88P-201ENST00000411220 SELPP16109 830 aa1.31□□□□□ -2.2
RNU4-88P-201ENST00000411220 VARSP26640 1264 aaKnown RBP1.31□□□□□ -2.2
RNU4-88P-201ENST00000411220 CXorf38Q8TB03 319 aa1.31□□□□□ -2.2
RNU4-88P-201ENST00000411220 PARD6AQ9NPB6 346 aa1.31□□□□□ -2.2
RNU4-88P-201ENST00000411220 RIOK3O14730 519 aaKnown RBP1.3□□□□□ -2.2
RNU4-88P-201ENST00000411220 CELA3BP08861 270 aa1.3□□□□□ -2.2
RNU4-88P-201ENST00000411220 CTSOP43234 321 aaPredicted RBP1.3□□□□□ -2.2
RNU4-88P-201ENST00000411220 NR5A1Q13285 461 aa1.3□□□□□ -2.2
RNU4-88P-201ENST00000411220 RNF217Q8TC41 542 aa1.3□□□□□ -2.2
RNU4-88P-201ENST00000411220 LENG1Q96BZ8 264 aaPredicted RBP1.3□□□□□ -2.2
RNU4-88P-201ENST00000411220 PPP1R16BQ96T49 567 aa1.3□□□□□ -2.2
RNU4-88P-201ENST00000411220 CFHR5Q9BXR6 569 aa1.3□□□□□ -2.2
RNU4-88P-201ENST00000411220 DXOO77932 396 aaKnown RBP1.29□□□□□ -2.2
RNU4-88P-201ENST00000411220 SLC10A3P09131 477 aa1.29□□□□□ -2.2
RNU4-88P-201ENST00000411220 EYA1Q99502 592 aa1.29□□□□□ -2.2
RNU4-88P-201ENST00000411220 BCL11BQ9C0K0 894 aaPredicted RBP1.29□□□□□ -2.2
RNU4-88P-201ENST00000411220 ANGEL1Q9UNK9 670 aaKnown RBP1.29□□□□□ -2.2
RNU4-88P-201ENST00000411220 BIN1O00499 593 aa1.28□□□□□ -2.2
RNU4-88P-201ENST00000411220 SLC27A5Q9Y2P5 690 aa1.28□□□□□ -2.2
RNU4-88P-201ENST00000411220 CNTNAP4Q9C0A0 1308 aa1.28□□□□□ -2.2
RNU4-88P-201ENST00000411220 BMP4P12644 408 aa1.27□□□□□ -2.21
RNU4-88P-201ENST00000411220 TNFRSF1AP19438 455 aa1.27□□□□□ -2.21
RNU4-88P-201ENST00000411220 SPATS1Q496A3 300 aa1.27□□□□□ -2.21
RNU4-88P-201ENST00000411220 XKR5Q6UX68 686 aa1.27□□□□□ -2.21
RNU4-88P-201ENST00000411220 TMEM40Q8WWA1 233 aa1.27□□□□□ -2.21
RNU4-88P-201ENST00000411220 PHF24Q9UPV7 400 aa1.27□□□□□ -2.21
RNU4-88P-201ENST00000411220 NEURL1BA8MQ27 555 aa1.26□□□□□ -2.21
RNU4-88P-201ENST00000411220 IGLV1-40P01703 118 aa1.26□□□□□ -2.21
RNU4-88P-201ENST00000411220 SKIP12755 728 aa1.26□□□□□ -2.21
RNU4-88P-201ENST00000411220 KRT10P13645 584 aa1.26□□□□□ -2.21
RNU4-88P-201ENST00000411220 DNAJB2P25686 324 aa1.26□□□□□ -2.21
RNU4-88P-201ENST00000411220 ERICH6BQ5W0A0 696 aa1.26□□□□□ -2.21
RNU4-88P-201ENST00000411220 MSL1Q68DK7 614 aa1.26□□□□□ -2.21
RNU4-88P-201ENST00000411220 FBXL18Q96ME1 805 aa1.26□□□□□ -2.21
RNU4-88P-201ENST00000411220 CDK15Q96Q40 435 aa1.26□□□□□ -2.21
RNU4-88P-201ENST00000411220 POLMQ9NP87 494 aaPredicted RBP1.26□□□□□ -2.21
RNU4-88P-201ENST00000411220 KRTAP9-6A8MVA2 160 aa1.25□□□□□ -2.21
RNU4-88P-201ENST00000411220 KRTAP10-11P60412 298 aa1.25□□□□□ -2.21
RNU4-88P-201ENST00000411220 GLCCI1Q86VQ1 547 aa1.25□□□□□ -2.21
RNU4-88P-201ENST00000411220 TP53INP2Q8IXH6 220 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms