RNA–Protein interactions for RNA: ENST00000411066.1

RN7SKP259-201, Transcript of RNA, 7SK small nuclear pseudogene 259, humanhuman

BASIC

Gene RN7SKP259, Length 333 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP259-201ENST00000411066 GCP02774 474 aa13.68□□□□□ -0.22
RN7SKP259-201ENST00000411066 MCM10Q7L590 875 aa13.68□□□□□ -0.22
RN7SKP259-201ENST00000411066 CADPS2Q86UW7 1296 aa13.68□□□□□ -0.22
RN7SKP259-201ENST00000411066 ARHGEF25Q86VW2 580 aa13.68□□□□□ -0.22
RN7SKP259-201ENST00000411066 BABAM1Q9NWV8 329 aa13.68□□□□□ -0.22
RN7SKP259-201ENST00000411066 PCDHB15Q9Y5E8 787 aa13.68□□□□□ -0.22
RN7SKP259-201ENST00000411066 NCAPD2Q15021 1401 aa13.67□□□□□ -0.22
RN7SKP259-201ENST00000411066 ITPRIPQ8IWB1 547 aa13.67□□□□□ -0.22
RN7SKP259-201ENST00000411066 TMEM57Q8N5G2 664 aa13.67□□□□□ -0.22
RN7SKP259-201ENST00000411066 API5Q9BZZ5 524 aaKnown RBP13.67□□□□□ -0.22
RN7SKP259-201ENST00000411066 SOS1Q07889 1333 aaPredicted RBP13.66□□□□□ -0.22
RN7SKP259-201ENST00000411066 GNAT3A8MTJ3 354 aa13.66□□□□□ -0.22
RN7SKP259-201ENST00000411066 HDAC1Q13547 482 aaPredicted RBP13.66□□□□□ -0.22
RN7SKP259-201ENST00000411066 MAP3K5Q99683 1374 aa13.66□□□□□ -0.22
RN7SKP259-201ENST00000411066 LMTK3Q96Q04 1460 aa13.66□□□□□ -0.22
RN7SKP259-201ENST00000411066 ABCC4O15439 1325 aa13.65□□□□□ -0.22
RN7SKP259-201ENST00000411066 ZBTB40Q9NUA8 1239 aa13.65□□□□□ -0.22
RN7SKP259-201ENST00000411066 MSH6P52701 1360 aa13.65□□□□□ -0.22
RN7SKP259-201ENST00000411066 CAMTA1Q9Y6Y1 1673 aa13.65□□□□□ -0.22
RN7SKP259-201ENST00000411066 STRCQ7RTU9 1775 aa13.64□□□□□ -0.23
RN7SKP259-201ENST00000411066 HSPA2P54652 639 aa13.64□□□□□ -0.23
RN7SKP259-201ENST00000411066 LTV1Q96GA3 475 aaPredicted RBP13.64□□□□□ -0.23
RN7SKP259-201ENST00000411066 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
RN7SKP259-201ENST00000411066 XIRP1Q702N8 1843 aaKnown RBP13.63□□□□□ -0.23
RN7SKP259-201ENST00000411066 KDM4FA0A1W2PPD8 638 aa13.63□□□□□ -0.23
RN7SKP259-201ENST00000411066 ELL2O00472 640 aaPredicted RBP13.63□□□□□ -0.23
RN7SKP259-201ENST00000411066 ANP32AP39687 249 aaKnown RBP13.63□□□□□ -0.23
RN7SKP259-201ENST00000411066 FAM161AQ3B820 660 aa13.63□□□□□ -0.23
RN7SKP259-201ENST00000411066 TSPYL4Q9UJ04 414 aa13.63□□□□□ -0.23
RN7SKP259-201ENST00000411066 ABCC6O95255 1503 aa13.63□□□□□ -0.23
RN7SKP259-201ENST00000411066 XPCQ01831 940 aaPredicted RBP13.62□□□□□ -0.23
RN7SKP259-201ENST00000411066 NBPF6Q5VWK0 638 aa13.62□□□□□ -0.23
RN7SKP259-201ENST00000411066 NBPF4Q96M43 638 aa13.62□□□□□ -0.23
RN7SKP259-201ENST00000411066 MED1Q15648 1581 aaPredicted RBP13.62□□□□□ -0.23
RN7SKP259-201ENST00000411066 PTPRCP08575 1304 aa13.62□□□□□ -0.23
RN7SKP259-201ENST00000411066 RGPD2P0DJD1 1756 aa13.61□□□□□ -0.23
RN7SKP259-201ENST00000411066 LMO7Q8WWI1 1683 aa13.61□□□□□ -0.23
RN7SKP259-201ENST00000411066 ZBTB7BO15156 539 aaPredicted RBP13.61□□□□□ -0.23
RN7SKP259-201ENST00000411066 TAF7Q15545 349 aaPredicted RBP13.61□□□□□ -0.23
RN7SKP259-201ENST00000411066 AMOTQ4VCS5 1084 aa13.61□□□□□ -0.23
RN7SKP259-201ENST00000411066 CEMIPQ8WUJ3 1361 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 CACNA1FO60840 1977 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 RGS3P49796 1198 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 PLEKHO1Q53GL0 409 aaPredicted RBP13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 TNS3Q68CZ2 1445 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 LMOD2Q6P5Q4 547 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 SKAP1Q86WV1 359 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 SMC5Q8IY18 1101 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 IL17REQ8NFR9 667 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 ANKRD24Q8TF21 1146 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 PDZRN3Q9UPQ7 1066 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 PLEKHG2Q9H7P9 1386 aa13.59□□□□□ -0.23
RN7SKP259-201ENST00000411066 OVOS2A0A0G2JMS6 1433 aa13.59□□□□□ -0.23
RN7SKP259-201ENST00000411066 INTS3Q68E01 1043 aaKnown RBP13.59□□□□□ -0.23
RN7SKP259-201ENST00000411066 PXDNQ92626 1479 aa13.59□□□□□ -0.23
RN7SKP259-201ENST00000411066 VIRMAQ69YN4 1812 aaKnown RBP13.59□□□□□ -0.23
RN7SKP259-201ENST00000411066 ZBTB7CA1YPR0 619 aa13.58□□□□□ -0.24
RN7SKP259-201ENST00000411066 AKAP4Q5JQC9 854 aa13.58□□□□□ -0.24
RN7SKP259-201ENST00000411066 USHBP1Q8N6Y0 703 aa13.58□□□□□ -0.24
RN7SKP259-201ENST00000411066 CHMP4AQ9BY43 222 aa13.58□□□□□ -0.24
RN7SKP259-201ENST00000411066 FAM208AQ9UK61 1670 aaKnown RBP13.57□□□□□ -0.24
RN7SKP259-201ENST00000411066 CRYBG1Q9Y4K1 1723 aa13.57□□□□□ -0.24
RN7SKP259-201ENST00000411066 KRT24Q2M2I5 525 aa13.57□□□□□ -0.24
RN7SKP259-201ENST00000411066 C8orf34Q49A92 452 aa13.57□□□□□ -0.24
RN7SKP259-201ENST00000411066 COL18A1P39060 1754 aa13.57□□□□□ -0.24
RN7SKP259-201ENST00000411066 SPATA31A3Q5VYP0 1347 aa13.57□□□□□ -0.24
RN7SKP259-201ENST00000411066 RGS12O14924 1447 aa13.56□□□□□ -0.24
RN7SKP259-201ENST00000411066 RGPD5Q99666 1765 aa13.56□□□□□ -0.24
RN7SKP259-201ENST00000411066 MSH5O43196 834 aa13.56□□□□□ -0.24
RN7SKP259-201ENST00000411066 CCDC30Q5VVM6 783 aa13.56□□□□□ -0.24
RN7SKP259-201ENST00000411066 LRRC59Q96AG4 307 aaKnown RBP13.56□□□□□ -0.24
RN7SKP259-201ENST00000411066 IPO9Q96P70 1041 aaKnown RBP13.56□□□□□ -0.24
RN7SKP259-201ENST00000411066 MIS18AQ9NYP9 233 aa13.56□□□□□ -0.24
RN7SKP259-201ENST00000411066 SLC4A2P04920 1241 aa13.55□□□□□ -0.24
RN7SKP259-201ENST00000411066 ZNF530Q6P9A1 599 aaPredicted RBP13.55□□□□□ -0.24
RN7SKP259-201ENST00000411066 STK31Q9BXU1 1019 aa13.55□□□□□ -0.24
RN7SKP259-201ENST00000411066 ERBB3P21860 1342 aa13.55□□□□□ -0.24
RN7SKP259-201ENST00000411066 CPDO75976 1380 aa13.55□□□□□ -0.24
RN7SKP259-201ENST00000411066 KDM3BQ7LBC6 1761 aa13.55□□□□□ -0.24
RN7SKP259-201ENST00000411066 HOXB7P09629 217 aa13.54□□□□□ -0.24
RN7SKP259-201ENST00000411066 C1orf141Q5JVX7 400 aa13.54□□□□□ -0.24
RN7SKP259-201ENST00000411066 GCC1Q96CN9 775 aa13.54□□□□□ -0.24
RN7SKP259-201ENST00000411066 AXIN2Q9Y2T1 843 aa13.54□□□□□ -0.24
RN7SKP259-201ENST00000411066 ADAMTS7Q9UKP4 1686 aa13.53□□□□□ -0.24
RN7SKP259-201ENST00000411066 ZC3H6P61129 1189 aaKnown RBP13.53□□□□□ -0.24
RN7SKP259-201ENST00000411066 BRINP3Q76B58 766 aa13.53□□□□□ -0.24
RN7SKP259-201ENST00000411066 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.25
RN7SKP259-201ENST00000411066 CCT4P50991 539 aaKnown RBP13.52□□□□□ -0.25
RN7SKP259-201ENST00000411066 NUCB1Q02818 461 aa13.52□□□□□ -0.25
RN7SKP259-201ENST00000411066 DDRGK1Q96HY6 314 aa13.52□□□□□ -0.25
RN7SKP259-201ENST00000411066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.25
RN7SKP259-201ENST00000411066 SOS2Q07890 1332 aaPredicted RBP13.51□□□□□ -0.25
RN7SKP259-201ENST00000411066 TEFQ10587 303 aa13.51□□□□□ -0.25
RN7SKP259-201ENST00000411066 DDX17Q92841 729 aaKnown RBP13.51□□□□□ -0.25
RN7SKP259-201ENST00000411066 N4BP2Q86UW6 1770 aaPredicted RBP13.5□□□□□ -0.25
RN7SKP259-201ENST00000411066 ZNF335Q9H4Z2 1342 aaPredicted RBP13.5□□□□□ -0.25
RN7SKP259-201ENST00000411066 EIF4A1P60842 406 aaKnown RBP13.5□□□□□ -0.25
RN7SKP259-201ENST00000411066 ERICH6Q7L0X2 663 aa13.5□□□□□ -0.25
RN7SKP259-201ENST00000411066 RPAP2Q8IXW5 612 aaPredicted RBP13.5□□□□□ -0.25
RN7SKP259-201ENST00000411066 LGR6Q9HBX8 967 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms