RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
RNU4-78P-201ENST00000410940 GPSM3Q9Y4H4 160 aa5.87□□□□□ -1.47
RNU4-78P-201ENST00000410940 CARNS1A5YM72 827 aa5.86□□□□□ -1.47
RNU4-78P-201ENST00000410940 USP17L3A6NCW0 530 aa5.86□□□□□ -1.47
RNU4-78P-201ENST00000410940 USP17L4A6NCW7 530 aa5.86□□□□□ -1.47
RNU4-78P-201ENST00000410940 SOWAHDA6NJG2 315 aa5.86□□□□□ -1.47
RNU4-78P-201ENST00000410940 UNCXA6NJT0 531 aa5.86□□□□□ -1.47
RNU4-78P-201ENST00000410940 ITGAEP38570 1179 aa5.86□□□□□ -1.47
RNU4-78P-201ENST00000410940 MARSP56192 900 aaKnown RBP5.86□□□□□ -1.47
RNU4-78P-201ENST00000410940 COL19A1Q14993 1142 aa5.86□□□□□ -1.47
RNU4-78P-201ENST00000410940 NR6A1Q15406 480 aa5.86□□□□□ -1.47
RNU4-78P-201ENST00000410940 MAP7D1Q3KQU3 841 aa5.86□□□□□ -1.47
RNU4-78P-201ENST00000410940 USP17L2Q6R6M4 530 aa5.86□□□□□ -1.47
RNU4-78P-201ENST00000410940 USP17L1Q7RTZ2 530 aa5.86□□□□□ -1.47
RNU4-78P-201ENST00000410940 ZFP42Q96MM3 310 aa5.86□□□□□ -1.47
RNU4-78P-201ENST00000410940 BCL2L13Q9BXK5 485 aa5.86□□□□□ -1.47
RNU4-78P-201ENST00000410940 EGFL7Q9UHF1 273 aa5.86□□□□□ -1.47
RNU4-78P-201ENST00000410940 RNF225M0QZC1 329 aaPredicted RBP5.85□□□□□ -1.47
RNU4-78P-201ENST00000410940 SKIP12755 728 aa5.85□□□□□ -1.47
RNU4-78P-201ENST00000410940 ZNF16P17020 682 aaPredicted RBP5.85□□□□□ -1.47
RNU4-78P-201ENST00000410940 SKOR1P84550 965 aa5.85□□□□□ -1.47
RNU4-78P-201ENST00000410940 LYPD8Q6UX82 237 aa5.85□□□□□ -1.47
RNU4-78P-201ENST00000410940 TRIM50Q86XT4 487 aa5.85□□□□□ -1.47
RNU4-78P-201ENST00000410940 GPKOWQ92917 476 aaPredicted RBP eCLIP5.85□□□□□ -1.47
RNU4-78P-201ENST00000410940 ZMIZ1Q9ULJ6 1067 aa5.85□□□□□ -1.47
RNU4-78P-201ENST00000410940 USP17L5A8MUK1 530 aa5.84□□□□□ -1.47
RNU4-78P-201ENST00000410940 TCF3P15923 654 aa5.84□□□□□ -1.47
RNU4-78P-201ENST00000410940 CDK11BP21127 795 aaKnown RBP5.84□□□□□ -1.47
RNU4-78P-201ENST00000410940 ATP1A2P50993 1020 aa5.84□□□□□ -1.47
RNU4-78P-201ENST00000410940 PHLDB3Q6NSJ2 640 aa5.84□□□□□ -1.47
RNU4-78P-201ENST00000410940 RNF19BQ6ZMZ0 732 aa5.84□□□□□ -1.47
RNU4-78P-201ENST00000410940 ARMC2Q8NEN0 867 aa5.84□□□□□ -1.47
RNU4-78P-201ENST00000410940 EPS8L1Q8TE68 723 aa5.84□□□□□ -1.47
RNU4-78P-201ENST00000410940 DRC1Q96MC2 740 aa5.84□□□□□ -1.47
RNU4-78P-201ENST00000410940 MKRN1Q9UHC7 482 aaKnown RBP5.84□□□□□ -1.47
RNU4-78P-201ENST00000410940 CDK11AQ9UQ88 783 aaPredicted RBP5.84□□□□□ -1.47
RNU4-78P-201ENST00000410940 USP17L15C9J2P7 530 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 USP17L10C9JJH3 530 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 USP17L13C9JLJ4 530 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 USP17L12C9JPN9 530 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 USP17L11C9JVI0 530 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 USP17L21D6R901 530 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 USP17L18D6R9N7 530 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 USP17L22D6RA61 530 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 USP17L17D6RBQ6 530 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 USP17L19D6RCP7 530 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 USP17L20D6RJB6 530 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 RASA1P20936 1047 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 MMP16P51512 607 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 WNT7BP56706 349 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 USP17L24Q0WX57 530 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 PTK7Q13308 1070 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 SLFNL1Q499Z3 407 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 GPAT2Q6NUI2 795 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 STK32AQ8WU08 396 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 FKBPLQ9UIM3 349 aa5.83□□□□□ -1.48
RNU4-78P-201ENST00000410940 IGHA1P01876 353 aa5.82□□□□□ -1.48
RNU4-78P-201ENST00000410940 ATP2B4P23634 1241 aa5.82□□□□□ -1.48
RNU4-78P-201ENST00000410940 FGD1P98174 961 aa5.82□□□□□ -1.48
RNU4-78P-201ENST00000410940 ANKMY2Q8IV38 441 aa5.82□□□□□ -1.48
RNU4-78P-201ENST00000410940 KIAA1522Q9P206 1035 aaPredicted RBP5.82□□□□□ -1.48
RNU4-78P-201ENST00000410940 ADAMTS8Q9UP79 889 aa5.82□□□□□ -1.48
RNU4-78P-201ENST00000410940 FBXO45P0C2W1 286 aa5.81□□□□□ -1.48
RNU4-78P-201ENST00000410940 GUCA2AQ02747 115 aa5.81□□□□□ -1.48
RNU4-78P-201ENST00000410940 PTK2Q05397 1052 aa5.81□□□□□ -1.48
RNU4-78P-201ENST00000410940 SF3A1Q15459 793 aaKnown RBP5.81□□□□□ -1.48
RNU4-78P-201ENST00000410940 EML3Q32P44 896 aa5.81□□□□□ -1.48
RNU4-78P-201ENST00000410940 CCDC125Q86Z20 511 aa5.81□□□□□ -1.48
RNU4-78P-201ENST00000410940 ZSCAN29Q8IWY8 852 aaPredicted RBP5.81□□□□□ -1.48
RNU4-78P-201ENST00000410940 LARGE2Q8N3Y3 721 aa5.81□□□□□ -1.48
RNU4-78P-201ENST00000410940 BIN2Q9UBW5 565 aaPredicted RBP5.81□□□□□ -1.48
RNU4-78P-201ENST00000410940 RBM19Q9Y4C8 960 aaKnown RBP5.81□□□□□ -1.48
RNU4-78P-201ENST00000410940 SIAH2O43255 324 aa5.8□□□□□ -1.48
RNU4-78P-201ENST00000410940 ZC3H6P61129 1189 aaKnown RBP5.8□□□□□ -1.48
RNU4-78P-201ENST00000410940 FAM69CQ0P6D2 419 aa5.8□□□□□ -1.48
RNU4-78P-201ENST00000410940 GIPC2Q8TF65 315 aa5.8□□□□□ -1.48
RNU4-78P-201ENST00000410940 SREK1Q8WXA9 508 aaKnown RBP5.8□□□□□ -1.48
RNU4-78P-201ENST00000410940 CEP126Q9P2H0 1117 aa5.8□□□□□ -1.48
RNU4-78P-201ENST00000410940 DNMT3AQ9Y6K1 912 aaPredicted RBP5.8□□□□□ -1.48
RNU4-78P-201ENST00000410940 WASF2Q9Y6W5 498 aa5.8□□□□□ -1.48
RNU4-78P-201ENST00000410940 ANKRD33BA6NCL7 494 aa5.79□□□□□ -1.48
RNU4-78P-201ENST00000410940 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.79□□□□□ -1.48
RNU4-78P-201ENST00000410940 PDXDC2PQ6P474 469 aa5.79□□□□□ -1.48
RNU4-78P-201ENST00000410940 CHIC2Q9UKJ5 165 aa5.79□□□□□ -1.48
RNU4-78P-201ENST00000410940 SOBPA7XYQ1 873 aa5.78□□□□□ -1.48
RNU4-78P-201ENST00000410940 PER1O15534 1290 aaPredicted RBP5.78□□□□□ -1.48
RNU4-78P-201ENST00000410940 DXOO77932 396 aaKnown RBP5.78□□□□□ -1.48
RNU4-78P-201ENST00000410940 NCOA4Q13772 614 aa5.78□□□□□ -1.48
RNU4-78P-201ENST00000410940 CRTC2Q53ET0 693 aaPredicted RBP5.78□□□□□ -1.48
RNU4-78P-201ENST00000410940 NPAS4Q8IUM7 802 aa5.78□□□□□ -1.48
RNU4-78P-201ENST00000410940 CCDC24Q8N4L8 307 aa5.78□□□□□ -1.48
RNU4-78P-201ENST00000410940 KRTAP9-2Q9BYQ4 174 aa5.78□□□□□ -1.48
RNU4-78P-201ENST00000410940 NOD1Q9Y239 953 aa5.78□□□□□ -1.48
RNU4-78P-201ENST00000410940 PIK3CDO00329 1044 aa5.77□□□□□ -1.49
RNU4-78P-201ENST00000410940 FOXK2Q01167 660 aa5.77□□□□□ -1.49
RNU4-78P-201ENST00000410940 SF3B2Q13435 895 aaKnown RBP5.77□□□□□ -1.49
RNU4-78P-201ENST00000410940 PTPRNQ16849 979 aa5.77□□□□□ -1.49
RNU4-78P-201ENST00000410940 TAS1R3Q7RTX0 852 aa5.77□□□□□ -1.49
RNU4-78P-201ENST00000410940 PHTF2Q8N3S3 785 aa5.77□□□□□ -1.49
RNU4-78P-201ENST00000410940 OGFOD1Q8N543 542 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms