RNA–Protein interactions for RNA: ENST00000410049.1

C2orf49-202, Transcript of chromosome 2 open reading frame 49, humanhuman

TSL 1 (best) BASIC

Gene C2orf49, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf49-202ENST00000410049 FYB1O15117 783 aa23.84■■□□□ 1.41
C2orf49-202ENST00000410049 ZCRB1Q8TBF4 217 aaKnown RBP23.84■■□□□ 1.41
C2orf49-202ENST00000410049 DOT1LQ8TEK3 1739 aa23.84■■□□□ 1.41
C2orf49-202ENST00000410049 TUBGCP6Q96RT7 1819 aa23.83■■□□□ 1.41
C2orf49-202ENST00000410049 PRIM1P49642 420 aaKnown RBP23.82■■□□□ 1.4
C2orf49-202ENST00000410049 TMF1P82094 1093 aa23.82■■□□□ 1.4
C2orf49-202ENST00000410049 CGNL1Q0VF96 1302 aa23.82■■□□□ 1.4
C2orf49-202ENST00000410049 NBPF6Q5VWK0 638 aa23.8■■□□□ 1.4
C2orf49-202ENST00000410049 NBPF4Q96M43 638 aa23.8■■□□□ 1.4
C2orf49-202ENST00000410049 MEGF6O75095 1541 aa23.79■■□□□ 1.4
C2orf49-202ENST00000410049 NSD2O96028 1365 aa23.79■■□□□ 1.4
C2orf49-202ENST00000410049 KIF20BQ96Q89 1820 aa23.78■■□□□ 1.4
C2orf49-202ENST00000410049 RRS1Q15050 365 aaKnown RBP23.78■■□□□ 1.4
C2orf49-202ENST00000410049 SYTL4Q96C24 671 aaPredicted RBP23.78■■□□□ 1.4
C2orf49-202ENST00000410049 PNPLA7Q6ZV29 1317 aa23.78■■□□□ 1.4
C2orf49-202ENST00000410049 GOLGB1Q14789 3259 aaKnown RBP23.78■■□□□ 1.4
C2orf49-202ENST00000410049 GGNBP2Q9H3C7 697 aa23.77■■□□□ 1.4
C2orf49-202ENST00000410049 TFCP2L1Q9NZI6 479 aa23.76■■□□□ 1.39
C2orf49-202ENST00000410049 KIF24Q5T7B8 1368 aa23.76■■□□□ 1.39
C2orf49-202ENST00000410049 USP47Q96K76 1375 aa23.76■■□□□ 1.39
C2orf49-202ENST00000410049 CDCA8Q53HL2 280 aa23.75■■□□□ 1.39
C2orf49-202ENST00000410049 ZNF784Q8NCA9 323 aaPredicted RBP23.75■■□□□ 1.39
C2orf49-202ENST00000410049 POLD1P28340 1107 aa23.74■■□□□ 1.39
C2orf49-202ENST00000410049 INSRP06213 1382 aa23.74■■□□□ 1.39
C2orf49-202ENST00000410049 SMG6Q86US8 1419 aaKnown RBP23.74■■□□□ 1.39
C2orf49-202ENST00000410049 KCNQ4P56696 695 aa23.73■■□□□ 1.39
C2orf49-202ENST00000410049 RAPGEF4Q8WZA2 1011 aa23.73■■□□□ 1.39
C2orf49-202ENST00000410049 TAF1LQ8IZX4 1826 aa23.71■■□□□ 1.39
C2orf49-202ENST00000410049 TATP17735 454 aaPredicted RBP23.71■■□□□ 1.39
C2orf49-202ENST00000410049 HMGB2P26583 209 aaKnown RBP23.71■■□□□ 1.39
C2orf49-202ENST00000410049 HSP90AB2PQ58FF8 381 aa23.71■■□□□ 1.39
C2orf49-202ENST00000410049 CCNL1Q9UK58 526 aaPredicted RBP23.71■■□□□ 1.39
C2orf49-202ENST00000410049 FLT4P35916 1363 aa23.7■■□□□ 1.38
C2orf49-202ENST00000410049 USHBP1Q8N6Y0 703 aa23.7■■□□□ 1.38
C2orf49-202ENST00000410049 ITGB4P16144 1822 aa23.7■■□□□ 1.38
C2orf49-202ENST00000410049 MAP2P11137 1827 aaKnown RBP23.68■■□□□ 1.38
C2orf49-202ENST00000410049 TRIM26Q12899 539 aaPredicted RBP23.68■■□□□ 1.38
C2orf49-202ENST00000410049 PCDH11XQ9BZA7 1347 aa23.67■■□□□ 1.38
C2orf49-202ENST00000410049 PCDH11YQ9BZA8 1340 aa23.67■■□□□ 1.38
C2orf49-202ENST00000410049 C5P01031 1676 aa23.67■■□□□ 1.38
C2orf49-202ENST00000410049 GPR162Q16538 588 aa23.66■■□□□ 1.38
C2orf49-202ENST00000410049 CARD14Q9BXL6 1004 aa23.66■■□□□ 1.38
C2orf49-202ENST00000410049 TIMELESSQ9UNS1 1208 aa23.66■■□□□ 1.38
C2orf49-202ENST00000410049 PKD1L3Q7Z443 1732 aa23.64■■□□□ 1.38
C2orf49-202ENST00000410049 COL23A1Q86Y22 540 aaPredicted RBP23.64■■□□□ 1.37
C2orf49-202ENST00000410049 ANKRD26Q9UPS8 1709 aa23.64■■□□□ 1.37
C2orf49-202ENST00000410049 CYP27B1O15528 508 aa23.63■■□□□ 1.37
C2orf49-202ENST00000410049 NCAPD2Q15021 1401 aa23.63■■□□□ 1.37
C2orf49-202ENST00000410049 FLAD1Q8NFF5 587 aa23.61■■□□□ 1.37
C2orf49-202ENST00000410049 EMILIN1Q9Y6C2 1016 aa23.61■■□□□ 1.37
C2orf49-202ENST00000410049 TOGARAM1Q9Y4F4 1720 aa23.61■■□□□ 1.37
C2orf49-202ENST00000410049 NKX1-1Q15270 411 aaPredicted RBP23.6■■□□□ 1.37
C2orf49-202ENST00000410049 KLHL34Q8N239 644 aa23.6■■□□□ 1.37
C2orf49-202ENST00000410049 WASHC2AQ641Q2 1341 aa23.59■■□□□ 1.37
C2orf49-202ENST00000410049 NSD3Q9BZ95 1437 aa23.59■■□□□ 1.37
C2orf49-202ENST00000410049 MPRIPQ6WCQ1 1025 aa23.59■■□□□ 1.37
C2orf49-202ENST00000410049 NLGN2Q8NFZ4 835 aa23.59■■□□□ 1.37
C2orf49-202ENST00000410049 SMARCC1Q92922 1105 aaPredicted RBP23.59■■□□□ 1.37
C2orf49-202ENST00000410049 PALLDQ8WX93 1383 aa23.59■■□□□ 1.37
C2orf49-202ENST00000410049 MSH5O43196 834 aa23.58■■□□□ 1.37
C2orf49-202ENST00000410049 UBR3Q6ZT12 1888 aa23.58■■□□□ 1.36
C2orf49-202ENST00000410049 C4BP0C0L5 1744 aa23.56■■□□□ 1.36
C2orf49-202ENST00000410049 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.56■■□□□ 1.361e-7■■■□□ 15.7
C2orf49-202ENST00000410049 GRIN3BO60391 1043 aa23.55■■□□□ 1.36
C2orf49-202ENST00000410049 SPG7Q9UQ90 795 aa23.55■■□□□ 1.36
C2orf49-202ENST00000410049 C1QTNF8P60827 252 aa23.54■■□□□ 1.36
C2orf49-202ENST00000410049 PIGBQ92521 554 aa23.53■■□□□ 1.36
C2orf49-202ENST00000410049 EYA1Q99502 592 aa23.53■■□□□ 1.36
C2orf49-202ENST00000410049 CD2APQ9Y5K6 639 aa23.53■■□□□ 1.36
C2orf49-202ENST00000410049 CLSPNQ9HAW4 1339 aa23.53■■□□□ 1.36
C2orf49-202ENST00000410049 PELP1Q8IZL8 1130 aaKnown RBP23.52■■□□□ 1.36
C2orf49-202ENST00000410049 PPM1GO15355 546 aaPredicted RBP23.51■■□□□ 1.35
C2orf49-202ENST00000410049 YBX3P16989 372 aaKnown RBP eCLIP23.51■■□□□ 1.35
C2orf49-202ENST00000410049 POLKQ9UBT6 870 aa23.51■■□□□ 1.35
C2orf49-202ENST00000410049 PLEKHG2Q9H7P9 1386 aa23.51■■□□□ 1.35
C2orf49-202ENST00000410049 MSL1Q68DK7 614 aa23.5■■□□□ 1.35
C2orf49-202ENST00000410049 AK7Q96M32 723 aa23.49■■□□□ 1.35
C2orf49-202ENST00000410049 IFNL2Q8IZJ0 200 aa23.48■■□□□ 1.35
C2orf49-202ENST00000410049 LOC102724428A0A0B4J2F2 783 aa23.47■■□□□ 1.35
C2orf49-202ENST00000410049 SIK1P57059 783 aa23.47■■□□□ 1.35
C2orf49-202ENST00000410049 SSFA2P28290 1259 aa23.46■■□□□ 1.35
C2orf49-202ENST00000410049 AMIGO3Q86WK7 504 aa23.46■■□□□ 1.35
C2orf49-202ENST00000410049 PHKG2P15735 406 aa23.45■■□□□ 1.34
C2orf49-202ENST00000410049 TMOD3Q9NYL9 352 aa23.45■■□□□ 1.34
C2orf49-202ENST00000410049 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.43■■□□□ 1.34
C2orf49-202ENST00000410049 GIGYF1O75420 1035 aaPredicted RBP23.43■■□□□ 1.34
C2orf49-202ENST00000410049 EIF4A2Q14240 407 aaKnown RBP23.43■■□□□ 1.34
C2orf49-202ENST00000410049 LINC00116Q8NCU8 138 aa23.43■■□□□ 1.34
C2orf49-202ENST00000410049 ASAP1Q9ULH1 1129 aa23.43■■□□□ 1.34
C2orf49-202ENST00000410049 ZNF831Q5JPB2 1677 aa23.43■■□□□ 1.34
C2orf49-202ENST00000410049 SENP3-EIF4A1A0A087X0R7 540 aa23.42■■□□□ 1.34
C2orf49-202ENST00000410049 CEP350Q5VT06 3117 aa23.41■■□□□ 1.34
C2orf49-202ENST00000410049 ATG3Q9NT62 314 aa23.4■■□□□ 1.34
C2orf49-202ENST00000410049 IGSF1Q8N6C5 1336 aa23.39■■□□□ 1.34
C2orf49-202ENST00000410049 PHF14O94880 888 aa23.39■■□□□ 1.33
C2orf49-202ENST00000410049 ATP6V1AP38606 617 aa23.39■■□□□ 1.33
C2orf49-202ENST00000410049 ITPK1Q13572 414 aa23.39■■□□□ 1.33
C2orf49-202ENST00000410049 ERVV-2B6SEH9 535 aa23.38■■□□□ 1.33
C2orf49-202ENST00000410049 SMIM5Q71RC9 77 aa23.38■■□□□ 1.33
C2orf49-202ENST00000410049 KIF13BQ9NQT8 1826 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms