RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 TOGARAM1Q9Y4F4 1720 aa18.97■□□□□ 0.63
GYPC-203ENST00000409836 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.97■□□□□ 0.63
GYPC-203ENST00000409836 RAPGEF4Q8WZA2 1011 aa18.96■□□□□ 0.63
GYPC-203ENST00000409836 BTAF1O14981 1849 aa18.95■□□□□ 0.62
GYPC-203ENST00000409836 PPP2R1AP30153 589 aa18.95■□□□□ 0.62
GYPC-203ENST00000409836 USHBP1Q8N6Y0 703 aa18.95■□□□□ 0.62
GYPC-203ENST00000409836 DDX10Q13206 875 aaKnown RBP18.94■□□□□ 0.62
GYPC-203ENST00000409836 FAM182BQ5T319 152 aa18.94■□□□□ 0.62
GYPC-203ENST00000409836 PCDH11XQ9BZA7 1347 aa18.94■□□□□ 0.62
GYPC-203ENST00000409836 PCDH11YQ9BZA8 1340 aa18.94■□□□□ 0.62
GYPC-203ENST00000409836 ADAMTS7Q9UKP4 1686 aa18.93■□□□□ 0.62
GYPC-203ENST00000409836 TATP17735 454 aaPredicted RBP18.93■□□□□ 0.62
GYPC-203ENST00000409836 NUP188Q5SRE5 1749 aa18.93■□□□□ 0.62
GYPC-203ENST00000409836 ZNF316A6NFI3 1004 aaPredicted RBP18.92■□□□□ 0.62
GYPC-203ENST00000409836 ZCRB1Q8TBF4 217 aaKnown RBP18.92■□□□□ 0.62
GYPC-203ENST00000409836 ITGB4P16144 1822 aa18.91■□□□□ 0.62
GYPC-203ENST00000409836 RALBP1Q15311 655 aa18.91■□□□□ 0.62
GYPC-203ENST00000409836 DIAPH1O60610 1272 aaKnown RBP18.9■□□□□ 0.62
GYPC-203ENST00000409836 LY75O60449 1722 aa18.89■□□□□ 0.61
GYPC-203ENST00000409836 VIRMAQ69YN4 1812 aaKnown RBP18.89■□□□□ 0.61
GYPC-203ENST00000409836 BCL11BQ9C0K0 894 aaPredicted RBP18.89■□□□□ 0.61
GYPC-203ENST00000409836 SCN11AQ9UI33 1791 aa18.88■□□□□ 0.61
GYPC-203ENST00000409836 CYP27B1O15528 508 aa18.87■□□□□ 0.61
GYPC-203ENST00000409836 TRIM37O94972 964 aa18.87■□□□□ 0.61
GYPC-203ENST00000409836 NKX1-1Q15270 411 aaPredicted RBP18.87■□□□□ 0.61
GYPC-203ENST00000409836 AEBP1Q8IUX7 1158 aa18.87■□□□□ 0.61
GYPC-203ENST00000409836 CFAP53Q96M91 514 aa18.87■□□□□ 0.61
GYPC-203ENST00000409836 PAPPAQ13219 1627 aa18.86■□□□□ 0.61
GYPC-203ENST00000409836 MYBBP1AQ9BQG0 1328 aaKnown RBP18.86■□□□□ 0.61
GYPC-203ENST00000409836 BAG6P46379 1132 aa18.86■□□□□ 0.61
GYPC-203ENST00000409836 SF3B2Q13435 895 aaKnown RBP18.86■□□□□ 0.61
GYPC-203ENST00000409836 SPG7Q9UQ90 795 aa18.86■□□□□ 0.61
GYPC-203ENST00000409836 MRC1P22897 1456 aa18.85■□□□□ 0.61
GYPC-203ENST00000409836 PLSCR1O15162 318 aa18.84■□□□□ 0.61
GYPC-203ENST00000409836 AMOTQ4VCS5 1084 aa18.84■□□□□ 0.61
GYPC-203ENST00000409836 SULT6B1Q6IMI4 303 aa18.84■□□□□ 0.61
GYPC-203ENST00000409836 KAT6BQ8WYB5 2073 aa18.83■□□□□ 0.61
GYPC-203ENST00000409836 CAMKK2Q96RR4 588 aa18.83■□□□□ 0.6
GYPC-203ENST00000409836 PRKRIP1Q9H875 184 aaPredicted RBP18.83■□□□□ 0.6
GYPC-203ENST00000409836 KDM6AO15550 1401 aaPredicted RBP18.83■□□□□ 0.6
GYPC-203ENST00000409836 ZNF831Q5JPB2 1677 aa18.82■□□□□ 0.6
GYPC-203ENST00000409836 PHKG2P15735 406 aa18.82■□□□□ 0.6
GYPC-203ENST00000409836 DEFB132Q7Z7B7 95 aa18.82■□□□□ 0.6
GYPC-203ENST00000409836 DDX54Q8TDD1 881 aaKnown RBP18.82■□□□□ 0.6
GYPC-203ENST00000409836 CICQ96RK0 1608 aaPredicted RBP18.82■□□□□ 0.6
GYPC-203ENST00000409836 PTF1AQ7RTS3 328 aa18.81■□□□□ 0.6
GYPC-203ENST00000409836 IFNL2Q8IZJ0 200 aa18.8■□□□□ 0.6
GYPC-203ENST00000409836 SIPA1L3O60292 1781 aaPredicted RBP18.79■□□□□ 0.6
GYPC-203ENST00000409836 KCNQ2O43526 872 aa18.79■□□□□ 0.6
GYPC-203ENST00000409836 APBA3O96018 575 aa18.79■□□□□ 0.6
GYPC-203ENST00000409836 CNGB1Q14028 1251 aaPredicted RBP18.79■□□□□ 0.6
GYPC-203ENST00000409836 PLEKHO1Q53GL0 409 aaPredicted RBP18.79■□□□□ 0.6
GYPC-203ENST00000409836 RSPH6AQ9H0K4 717 aa18.79■□□□□ 0.6
GYPC-203ENST00000409836 QSER1Q2KHR3 1735 aa18.78■□□□□ 0.6
GYPC-203ENST00000409836 NUDCQ9Y266 331 aa18.78■□□□□ 0.6
GYPC-203ENST00000409836 HSP90AB1P08238 724 aaKnown RBP18.77■□□□□ 0.6
GYPC-203ENST00000409836 EN1Q05925 392 aaPredicted RBP18.77■□□□□ 0.6
GYPC-203ENST00000409836 TAF1LQ8IZX4 1826 aa18.77■□□□□ 0.59
GYPC-203ENST00000409836 HMOX1P09601 288 aa18.76■□□□□ 0.59
GYPC-203ENST00000409836 DCAF5Q96JK2 942 aa18.76■□□□□ 0.59
GYPC-203ENST00000409836 FCHSD2O94868 740 aa18.75■□□□□ 0.59
GYPC-203ENST00000409836 ZNF530Q6P9A1 599 aaPredicted RBP18.75■□□□□ 0.59
GYPC-203ENST00000409836 ACSBG1Q96GR2 724 aa18.75■□□□□ 0.59
GYPC-203ENST00000409836 C5P01031 1676 aa18.75■□□□□ 0.59
GYPC-203ENST00000409836 DLG5Q8TDM6 1919 aa18.74■□□□□ 0.59
GYPC-203ENST00000409836 UBR2Q8IWV8 1755 aa18.74■□□□□ 0.59
GYPC-203ENST00000409836 U2SURPO15042 1029 aaKnown RBP18.74■□□□□ 0.59
GYPC-203ENST00000409836 PRIM1P49642 420 aaKnown RBP18.74■□□□□ 0.59
GYPC-203ENST00000409836 EZH2Q15910 746 aaKnown RBP18.74■□□□□ 0.59
GYPC-203ENST00000409836 ERVV-2B6SEH9 535 aa18.73■□□□□ 0.59
GYPC-203ENST00000409836 AKAP4Q5JQC9 854 aa18.73■□□□□ 0.59
GYPC-203ENST00000409836 MAP3K5Q99683 1374 aa18.72■□□□□ 0.59
GYPC-203ENST00000409836 PROM2Q8N271 834 aa18.72■□□□□ 0.59
GYPC-203ENST00000409836 CASZ1Q86V15 1759 aa18.72■□□□□ 0.59
GYPC-203ENST00000409836 CEMIPQ8WUJ3 1361 aa18.71■□□□□ 0.59
GYPC-203ENST00000409836 U2AF1L5P0DN76 240 aaPredicted RBP18.71■□□□□ 0.59
GYPC-203ENST00000409836 PRKAR2BP31323 418 aa18.71■□□□□ 0.59
GYPC-203ENST00000409836 U2AF1Q01081 240 aaKnown RBP eCLIP18.71■□□□□ 0.59
GYPC-203ENST00000409836 MTHFSDQ2M296 383 aaKnown RBP18.71■□□□□ 0.59
GYPC-203ENST00000409836 C1orf141Q5JVX7 400 aa18.71■□□□□ 0.59
GYPC-203ENST00000409836 GAS2L2Q8NHY3 880 aa18.71■□□□□ 0.59
GYPC-203ENST00000409836 TUBGCP6Q96RT7 1819 aa18.71■□□□□ 0.59
GYPC-203ENST00000409836 COL5A3P25940 1745 aaPredicted RBP18.71■□□□□ 0.59
GYPC-203ENST00000409836 PALLDQ8WX93 1383 aa18.69■□□□□ 0.58
GYPC-203ENST00000409836 TXNRD1Q16881 649 aa18.69■□□□□ 0.58
GYPC-203ENST00000409836 SLC27A3Q5K4L6 730 aa18.69■□□□□ 0.58
GYPC-203ENST00000409836 PLEKHF1Q96S99 279 aa18.69■□□□□ 0.58
GYPC-203ENST00000409836 LRP5O75197 1615 aa18.68■□□□□ 0.58
GYPC-203ENST00000409836 PIGBQ92521 554 aa18.68■□□□□ 0.58
GYPC-203ENST00000409836 PHACTR3Q96KR7 559 aa18.67■□□□□ 0.58
GYPC-203ENST00000409836 TMOD3Q9NYL9 352 aa18.67■□□□□ 0.58
GYPC-203ENST00000409836 TJP1Q07157 1748 aa18.66■□□□□ 0.58
GYPC-203ENST00000409836 SMARCC1Q92922 1105 aaPredicted RBP18.66■□□□□ 0.58
GYPC-203ENST00000409836 SYTL4Q96C24 671 aaPredicted RBP18.66■□□□□ 0.58
GYPC-203ENST00000409836 C4BP0C0L5 1744 aa18.66■□□□□ 0.58
GYPC-203ENST00000409836 KCPQ6ZWJ8 1503 aa18.65■□□□□ 0.58
GYPC-203ENST00000409836 COL24A1Q17RW2 1714 aa18.65■□□□□ 0.58
GYPC-203ENST00000409836 UBR3Q6ZT12 1888 aa18.65■□□□□ 0.58
GYPC-203ENST00000409836 RNMTO43148 476 aaKnown RBP18.64■□□□□ 0.57
GYPC-203ENST00000409836 MPRIPQ6WCQ1 1025 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms