RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 BCL9O00512 1426 aa24.29■■□□□ 1.48
PAX3-208ENST00000409828 SULT6B1Q6IMI4 303 aa24.29■■□□□ 1.48
PAX3-208ENST00000409828 SHANK3Q9BYB0 1731 aa24.29■■□□□ 1.48
PAX3-208ENST00000409828 ZCRB1Q8TBF4 217 aaKnown RBP24.28■■□□□ 1.48
PAX3-208ENST00000409828 U2SURPO15042 1029 aaKnown RBP24.26■■□□□ 1.47
PAX3-208ENST00000409828 AMOTQ4VCS5 1084 aa24.25■■□□□ 1.47
PAX3-208ENST00000409828 AEBP1Q8IUX7 1158 aa24.25■■□□□ 1.47
PAX3-208ENST00000409828 SPG7Q9UQ90 795 aa24.25■■□□□ 1.47
PAX3-208ENST00000409828 FCHSD2O94868 740 aa24.24■■□□□ 1.47
PAX3-208ENST00000409828 FAM196AQ6ZSG2 479 aa24.24■■□□□ 1.47
PAX3-208ENST00000409828 MARCH10Q8NA82 808 aaPredicted RBP24.23■■□□□ 1.47
PAX3-208ENST00000409828 PCDH11XQ9BZA7 1347 aa24.23■■□□□ 1.47
PAX3-208ENST00000409828 PCDH11YQ9BZA8 1340 aa24.23■■□□□ 1.47
PAX3-208ENST00000409828 EP400Q96L91 3159 aa24.22■■□□□ 1.47
PAX3-208ENST00000409828 U2AF1L5P0DN76 240 aaPredicted RBP24.22■■□□□ 1.47
PAX3-208ENST00000409828 U2AF1Q01081 240 aaKnown RBP eCLIP24.22■■□□□ 1.47
PAX3-208ENST00000409828 PLEKHO1Q53GL0 409 aaPredicted RBP24.22■■□□□ 1.47
PAX3-208ENST00000409828 HMOX1P09601 288 aa24.21■■□□□ 1.47
PAX3-208ENST00000409828 SBF2Q86WG5 1849 aa24.21■■□□□ 1.47
PAX3-208ENST00000409828 RSPH6AQ9H0K4 717 aa24.2■■□□□ 1.46
PAX3-208ENST00000409828 PNNQ9H307 717 aaKnown RBP24.2■■□□□ 1.46
PAX3-208ENST00000409828 DIEXFQ68CQ4 756 aaKnown RBP24.19■■□□□ 1.46
PAX3-208ENST00000409828 CYP27B1O15528 508 aa24.17■■□□□ 1.46
PAX3-208ENST00000409828 NKX1-1Q15270 411 aaPredicted RBP24.17■■□□□ 1.46
PAX3-208ENST00000409828 CCDC125Q86Z20 511 aa24.17■■□□□ 1.46
PAX3-208ENST00000409828 IFNL2Q8IZJ0 200 aa24.17■■□□□ 1.46
PAX3-208ENST00000409828 DDX54Q8TDD1 881 aaKnown RBP24.17■■□□□ 1.46
PAX3-208ENST00000409828 KAT6BQ8WYB5 2073 aa24.15■■□□□ 1.46
PAX3-208ENST00000409828 HSP90AB1P08238 724 aaKnown RBP24.14■■□□□ 1.45
PAX3-208ENST00000409828 PRKAR2BP31323 418 aa24.14■■□□□ 1.45
PAX3-208ENST00000409828 WDR43Q15061 677 aaKnown RBP eCLIP24.14■■□□□ 1.45
PAX3-208ENST00000409828 PHKG2P15735 406 aa24.13■■□□□ 1.45
PAX3-208ENST00000409828 FAM182BQ5T319 152 aa24.13■■□□□ 1.45
PAX3-208ENST00000409828 NHSQ6T4R5 1651 aa24.12■■□□□ 1.45
PAX3-208ENST00000409828 GAS2L2Q8NHY3 880 aa24.12■■□□□ 1.45
PAX3-208ENST00000409828 MRS2Q9HD23 443 aa24.12■■□□□ 1.45
PAX3-208ENST00000409828 SOCS7O14512 581 aa24.11■■□□□ 1.45
PAX3-208ENST00000409828 NEFMP07197 916 aa24.11■■□□□ 1.45
PAX3-208ENST00000409828 ZNF530Q6P9A1 599 aaPredicted RBP24.11■■□□□ 1.45
PAX3-208ENST00000409828 PLEKHF1Q96S99 279 aa24.11■■□□□ 1.45
PAX3-208ENST00000409828 CCER2I3L3R5 266 aa24.1■■□□□ 1.45
PAX3-208ENST00000409828 MTHFSDQ2M296 383 aaKnown RBP24.1■■□□□ 1.45
PAX3-208ENST00000409828 CCDC184Q52MB2 194 aa24.1■■□□□ 1.45
PAX3-208ENST00000409828 AKAP4Q5JQC9 854 aa24.1■■□□□ 1.45
PAX3-208ENST00000409828 C1orf141Q5JVX7 400 aa24.1■■□□□ 1.45
PAX3-208ENST00000409828 PNISRQ8TF01 805 aaKnown RBP24.1■■□□□ 1.45
PAX3-208ENST00000409828 UPF1Q92900 1129 aaKnown RBP eCLIP24.1■■□□□ 1.45
PAX3-208ENST00000409828 BCL11BQ9C0K0 894 aaPredicted RBP24.09■■□□□ 1.45
PAX3-208ENST00000409828 DOT1LQ8TEK3 1739 aa24.09■■□□□ 1.45
PAX3-208ENST00000409828 TNS1Q9HBL0 1735 aaKnown RBP24.09■■□□□ 1.45
PAX3-208ENST00000409828 DCAF5Q96JK2 942 aa24.08■■□□□ 1.45
PAX3-208ENST00000409828 PHACTR3Q96KR7 559 aa24.08■■□□□ 1.45
PAX3-208ENST00000409828 ADAMTS8Q9UP79 889 aa24.08■■□□□ 1.45
PAX3-208ENST00000409828 SCN11AQ9UI33 1791 aa24.08■■□□□ 1.44
PAX3-208ENST00000409828 ADAMTS7Q9UKP4 1686 aa24.08■■□□□ 1.44
PAX3-208ENST00000409828 VIRMAQ69YN4 1812 aaKnown RBP24.07■■□□□ 1.44
PAX3-208ENST00000409828 ITGB4P16144 1822 aa24.06■■□□□ 1.44
PAX3-208ENST00000409828 TOGARAM1Q9Y4F4 1720 aa24.06■■□□□ 1.44
PAX3-208ENST00000409828 MAPK8IP3Q9UPT6 1336 aa24.05■■□□□ 1.44
PAX3-208ENST00000409828 ERVV-2B6SEH9 535 aa24.04■■□□□ 1.44
PAX3-208ENST00000409828 TRIM37O94972 964 aa24.04■■□□□ 1.44
PAX3-208ENST00000409828 RGPD3A6NKT7 1758 aaPredicted RBP24.03■■□□□ 1.44
PAX3-208ENST00000409828 RGPD4Q7Z3J3 1758 aa24.03■■□□□ 1.44
PAX3-208ENST00000409828 HTATSF1O43719 755 aaKnown RBP24.03■■□□□ 1.44
PAX3-208ENST00000409828 SF3B2Q13435 895 aaKnown RBP24.03■■□□□ 1.44
PAX3-208ENST00000409828 RUNDC1Q96C34 613 aa24.03■■□□□ 1.44
PAX3-208ENST00000409828 DLG5Q8TDM6 1919 aa24.03■■□□□ 1.44
PAX3-208ENST00000409828 MAP3K5Q99683 1374 aa24.03■■□□□ 1.44
PAX3-208ENST00000409828 KDM6AO15550 1401 aaPredicted RBP24.02■■□□□ 1.44
PAX3-208ENST00000409828 GNAT3A8MTJ3 354 aa24.02■■□□□ 1.44
PAX3-208ENST00000409828 BTAF1O14981 1849 aa24.02■■□□□ 1.44
PAX3-208ENST00000409828 PRIM1P49642 420 aaKnown RBP24.01■■□□□ 1.43
PAX3-208ENST00000409828 KCNQ2O43526 872 aa24■■□□□ 1.43
PAX3-208ENST00000409828 NFE2L2Q16236 605 aa24■■□□□ 1.43
PAX3-208ENST00000409828 ACSBG1Q96GR2 724 aa24■■□□□ 1.43
PAX3-208ENST00000409828 PLSCR1O15162 318 aa23.99■■□□□ 1.43
PAX3-208ENST00000409828 MRC1P22897 1456 aa23.99■■□□□ 1.43
PAX3-208ENST00000409828 BAG6P46379 1132 aa23.98■■□□□ 1.43
PAX3-208ENST00000409828 MPRIPQ6WCQ1 1025 aa23.98■■□□□ 1.43
PAX3-208ENST00000409828 RNMTO43148 476 aaKnown RBP23.97■■□□□ 1.43
PAX3-208ENST00000409828 CEMIPQ8WUJ3 1361 aa23.97■■□□□ 1.43
PAX3-208ENST00000409828 MIER1Q8N108 512 aa23.96■■□□□ 1.43
PAX3-208ENST00000409828 APBA3O96018 575 aa23.95■■□□□ 1.42
PAX3-208ENST00000409828 TMPOP42166 694 aaKnown RBP23.95■■□□□ 1.42
PAX3-208ENST00000409828 PTF1AQ7RTS3 328 aa23.95■■□□□ 1.42
PAX3-208ENST00000409828 RTF1Q92541 710 aaKnown RBP23.95■■□□□ 1.42
PAX3-208ENST00000409828 SYTL4Q96C24 671 aaPredicted RBP23.95■■□□□ 1.42
PAX3-208ENST00000409828 TMOD3Q9NYL9 352 aa23.95■■□□□ 1.42
PAX3-208ENST00000409828 SIPA1L3O60292 1781 aaPredicted RBP23.94■■□□□ 1.42
PAX3-208ENST00000409828 NCBP3Q53F19 620 aaKnown RBP23.94■■□□□ 1.42
PAX3-208ENST00000409828 IL17REQ8NFR9 667 aa23.94■■□□□ 1.42
PAX3-208ENST00000409828 CABP4P57796 275 aa23.93■■□□□ 1.42
PAX3-208ENST00000409828 LMOD3Q0VAK6 560 aa23.93■■□□□ 1.42
PAX3-208ENST00000409828 CCDC146Q8IYE0 955 aa23.93■■□□□ 1.42
PAX3-208ENST00000409828 PIGBQ92521 554 aa23.93■■□□□ 1.42
PAX3-208ENST00000409828 SLC52A2Q9HAB3 445 aa23.93■■□□□ 1.42
PAX3-208ENST00000409828 LGR6Q9HBX8 967 aa23.93■■□□□ 1.42
PAX3-208ENST00000409828 LY75O60449 1722 aa23.93■■□□□ 1.42
PAX3-208ENST00000409828 SMARCC1Q92922 1105 aaPredicted RBP23.91■■□□□ 1.42
PAX3-208ENST00000409828 CAMKK2Q96RR4 588 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms