RNA–Protein interactions for RNA: ENST00000409332.5

UBE2F-202, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5 BASIC

Gene UBE2F, Length 1,138 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-202ENST00000409332 TERF2IPQ9NYB0 399 aa23.08■■□□□ 1.29
UBE2F-202ENST00000409332 RGPD2P0DJD1 1756 aa23.08■■□□□ 1.29
UBE2F-202ENST00000409332 SHANK3Q9BYB0 1731 aa23.08■■□□□ 1.28
UBE2F-202ENST00000409332 NLGN2Q8NFZ4 835 aa23.07■■□□□ 1.28
UBE2F-202ENST00000409332 ANKRD36BQ8N2N9 1353 aa23.06■■□□□ 1.28
UBE2F-202ENST00000409332 NSD2O96028 1365 aa23.05■■□□□ 1.28
UBE2F-202ENST00000409332 GIGYF1O75420 1035 aaPredicted RBP23.04■■□□□ 1.28
UBE2F-202ENST00000409332 FBLN1P23142 703 aa23.02■■□□□ 1.28
UBE2F-202ENST00000409332 MAP3K19Q56UN5 1328 aa23.02■■□□□ 1.28
UBE2F-202ENST00000409332 HOXC9P31274 260 aa23.01■■□□□ 1.27
UBE2F-202ENST00000409332 ZCRB1Q8TBF4 217 aaKnown RBP23.01■■□□□ 1.27
UBE2F-202ENST00000409332 CCNL1Q9UK58 526 aaPredicted RBP23.01■■□□□ 1.27
UBE2F-202ENST00000409332 MEGF6O75095 1541 aa23.01■■□□□ 1.27
UBE2F-202ENST00000409332 MSH5O43196 834 aa23■■□□□ 1.27
UBE2F-202ENST00000409332 AMPHP49418 695 aa23■■□□□ 1.27
UBE2F-202ENST00000409332 COG3Q96JB2 828 aa22.99■■□□□ 1.27
UBE2F-202ENST00000409332 YBX3P16989 372 aaKnown RBP eCLIP22.98■■□□□ 1.271e-6■■□□□ 11.6
UBE2F-202ENST00000409332 COL23A1Q86Y22 540 aaPredicted RBP22.97■■□□□ 1.27
UBE2F-202ENST00000409332 PUS7Q96PZ0 661 aaKnown RBP22.97■■□□□ 1.27
UBE2F-202ENST00000409332 USP47Q96K76 1375 aa22.96■■□□□ 1.27
UBE2F-202ENST00000409332 C5P01031 1676 aa22.96■■□□□ 1.27
UBE2F-202ENST00000409332 MSL1Q68DK7 614 aa22.95■■□□□ 1.26
UBE2F-202ENST00000409332 USHBP1Q8N6Y0 703 aa22.94■■□□□ 1.26
UBE2F-202ENST00000409332 GRIN3BO60391 1043 aa22.93■■□□□ 1.26
UBE2F-202ENST00000409332 NBPF6Q5VWK0 638 aa22.93■■□□□ 1.26
UBE2F-202ENST00000409332 NBPF4Q96M43 638 aa22.93■■□□□ 1.26
UBE2F-202ENST00000409332 RRS1Q15050 365 aaKnown RBP22.92■■□□□ 1.26
UBE2F-202ENST00000409332 TESK2Q96S53 571 aa22.91■■□□□ 1.26
UBE2F-202ENST00000409332 RTL1A6NKG5 1358 aa22.9■■□□□ 1.26
UBE2F-202ENST00000409332 TAF1LQ8IZX4 1826 aa22.9■■□□□ 1.26
UBE2F-202ENST00000409332 CEP350Q5VT06 3117 aa22.9■■□□□ 1.26
UBE2F-202ENST00000409332 TONSLQ96HA7 1378 aa22.89■■□□□ 1.26
UBE2F-202ENST00000409332 ST20-MTHFSA0A0A6YYL1 179 aa22.89■■□□□ 1.25
UBE2F-202ENST00000409332 RAPGEF4Q8WZA2 1011 aa22.88■■□□□ 1.25
UBE2F-202ENST00000409332 CGNL1Q0VF96 1302 aa22.87■■□□□ 1.25
UBE2F-202ENST00000409332 SMG6Q86US8 1419 aaKnown RBP22.87■■□□□ 1.25
UBE2F-202ENST00000409332 ATP10DQ9P241 1426 aa22.87■■□□□ 1.25
UBE2F-202ENST00000409332 TATP17735 454 aaPredicted RBP22.86■■□□□ 1.25
UBE2F-202ENST00000409332 GGNBP2Q9H3C7 697 aa22.86■■□□□ 1.25
UBE2F-202ENST00000409332 PALLDQ8WX93 1383 aa22.85■■□□□ 1.25
UBE2F-202ENST00000409332 FYB1O15117 783 aa22.84■■□□□ 1.25
UBE2F-202ENST00000409332 MPRIPQ6WCQ1 1025 aa22.84■■□□□ 1.25
UBE2F-202ENST00000409332 CD2APQ9Y5K6 639 aa22.84■■□□□ 1.25
UBE2F-202ENST00000409332 TOGARAM1Q9Y4F4 1720 aa22.84■■□□□ 1.25
UBE2F-202ENST00000409332 ITGB4P16144 1822 aa22.84■■□□□ 1.25
UBE2F-202ENST00000409332 PCDH11XQ9BZA7 1347 aa22.83■■□□□ 1.25
UBE2F-202ENST00000409332 PCDH11YQ9BZA8 1340 aa22.83■■□□□ 1.25
UBE2F-202ENST00000409332 C4BP0C0L5 1744 aa22.83■■□□□ 1.25
UBE2F-202ENST00000409332 HSP90AB2PQ58FF8 381 aa22.82■■□□□ 1.24
UBE2F-202ENST00000409332 IFFO2Q5TF58 517 aa22.82■■□□□ 1.24
UBE2F-202ENST00000409332 KIF20BQ96Q89 1820 aa22.82■■□□□ 1.24
UBE2F-202ENST00000409332 FLAD1Q8NFF5 587 aa22.81■■□□□ 1.24
UBE2F-202ENST00000409332 INSRP06213 1382 aa22.8■■□□□ 1.24
UBE2F-202ENST00000409332 AMIGO3Q86WK7 504 aa22.8■■□□□ 1.24
UBE2F-202ENST00000409332 GPBP1L1Q9HC44 474 aaPredicted RBP22.8■■□□□ 1.24
UBE2F-202ENST00000409332 UBR3Q6ZT12 1888 aa22.79■■□□□ 1.24
UBE2F-202ENST00000409332 SMIM5Q71RC9 77 aa22.79■■□□□ 1.24
UBE2F-202ENST00000409332 ZNF526Q8TF50 670 aaPredicted RBP22.79■■□□□ 1.24
UBE2F-202ENST00000409332 WWC3Q9ULE0 1092 aa22.79■■□□□ 1.24
UBE2F-202ENST00000409332 CYP27B1O15528 508 aa22.78■■□□□ 1.24
UBE2F-202ENST00000409332 PHF14O94880 888 aa22.78■■□□□ 1.24
UBE2F-202ENST00000409332 AK7Q96M32 723 aa22.78■■□□□ 1.24
UBE2F-202ENST00000409332 ADCY9O60503 1353 aa22.77■■□□□ 1.24
UBE2F-202ENST00000409332 FLT4P35916 1363 aa22.77■■□□□ 1.24
UBE2F-202ENST00000409332 PKD1L3Q7Z443 1732 aa22.77■■□□□ 1.24
UBE2F-202ENST00000409332 SLC24A1O60721 1099 aa22.77■■□□□ 1.24
UBE2F-202ENST00000409332 HMGB2P26583 209 aaKnown RBP22.76■■□□□ 1.23
UBE2F-202ENST00000409332 SMARCC1Q92922 1105 aaPredicted RBP22.75■■□□□ 1.23
UBE2F-202ENST00000409332 IGSF1Q8N6C5 1336 aa22.75■■□□□ 1.23
UBE2F-202ENST00000409332 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.73■■□□□ 1.23
UBE2F-202ENST00000409332 TMF1P82094 1093 aa22.73■■□□□ 1.23
UBE2F-202ENST00000409332 PIGBQ92521 554 aa22.73■■□□□ 1.23
UBE2F-202ENST00000409332 MAP2P11137 1827 aaKnown RBP22.73■■□□□ 1.23
UBE2F-202ENST00000409332 EMILIN1Q9Y6C2 1016 aa22.72■■□□□ 1.23
UBE2F-202ENST00000409332 KIF24Q5T7B8 1368 aa22.72■■□□□ 1.23
UBE2F-202ENST00000409332 HSPA6P17066 643 aa22.71■■□□□ 1.23
UBE2F-202ENST00000409332 LINC00116Q8NCU8 138 aa22.7■■□□□ 1.22
UBE2F-202ENST00000409332 NSD3Q9BZ95 1437 aa22.7■■□□□ 1.22
UBE2F-202ENST00000409332 LOC102724428A0A0B4J2F2 783 aa22.68■■□□□ 1.22
UBE2F-202ENST00000409332 SSFA2P28290 1259 aa22.68■■□□□ 1.22
UBE2F-202ENST00000409332 SIK1P57059 783 aa22.68■■□□□ 1.22
UBE2F-202ENST00000409332 PPM1GO15355 546 aaPredicted RBP22.67■■□□□ 1.22
UBE2F-202ENST00000409332 NKX1-1Q15270 411 aaPredicted RBP22.67■■□□□ 1.22
UBE2F-202ENST00000409332 NCAPD2Q15021 1401 aa22.66■■□□□ 1.22
UBE2F-202ENST00000409332 ANKRD26Q9UPS8 1709 aa22.66■■□□□ 1.22
UBE2F-202ENST00000409332 CARD14Q9BXL6 1004 aa22.66■■□□□ 1.22
UBE2F-202ENST00000409332 SPG7Q9UQ90 795 aa22.66■■□□□ 1.22
UBE2F-202ENST00000409332 GNPATO15228 680 aa22.65■■□□□ 1.22
UBE2F-202ENST00000409332 TMOD3Q9NYL9 352 aa22.65■■□□□ 1.22
UBE2F-202ENST00000409332 ASAP1Q9ULH1 1129 aa22.65■■□□□ 1.22
UBE2F-202ENST00000409332 ITPK1Q13572 414 aa22.64■■□□□ 1.21
UBE2F-202ENST00000409332 CICQ96RK0 1608 aaPredicted RBP22.63■■□□□ 1.21
UBE2F-202ENST00000409332 N4BP2Q86UW6 1770 aaPredicted RBP22.63■■□□□ 1.21
UBE2F-202ENST00000409332 KIF3CO14782 793 aa22.62■■□□□ 1.21
UBE2F-202ENST00000409332 ATP6V1AP38606 617 aa22.62■■□□□ 1.21
UBE2F-202ENST00000409332 KIAA1551Q9HCM1 1747 aa22.62■■□□□ 1.21
UBE2F-202ENST00000409332 KIF13BQ9NQT8 1826 aa22.61■■□□□ 1.21
UBE2F-202ENST00000409332 CDCA8Q53HL2 280 aa22.61■■□□□ 1.21
UBE2F-202ENST00000409332 EYA1Q99502 592 aa22.61■■□□□ 1.21
UBE2F-202ENST00000409332 MMP10P09238 476 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms