RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 ZFYVE9O95405 1425 aa20.71■□□□□ 0.91
SYNC-202ENST00000409190 RIMS2Q9UQ26 1411 aa20.71■□□□□ 0.91
SYNC-202ENST00000409190 HSP90AA2PQ14568 343 aaPredicted RBP20.71■□□□□ 0.91
SYNC-202ENST00000409190 MYO5BQ9ULV0 1848 aa20.7■□□□□ 0.9
SYNC-202ENST00000409190 TRIM6-TRIM34B2RNG4 842 aa20.7■□□□□ 0.9
SYNC-202ENST00000409190 NEK4P51957 841 aa20.7■□□□□ 0.9
SYNC-202ENST00000409190 ANKRD44Q8N8A2 993 aa20.7■□□□□ 0.9
SYNC-202ENST00000409190 PTCH1Q13635 1447 aa20.7■□□□□ 0.9
SYNC-202ENST00000409190 CCDC61Q9Y6R9 512 aa20.69■□□□□ 0.9
SYNC-202ENST00000409190 ST18O60284 1047 aa20.69■□□□□ 0.9
SYNC-202ENST00000409190 BRPF1P55201 1214 aaPredicted RBP20.69■□□□□ 0.9
SYNC-202ENST00000409190 ARHGEF40Q8TER5 1519 aa20.68■□□□□ 0.9
SYNC-202ENST00000409190 MED14O60244 1454 aa20.68■□□□□ 0.9
SYNC-202ENST00000409190 KLHL40Q2TBA0 621 aa20.68■□□□□ 0.9
SYNC-202ENST00000409190 NUTM2GQ5VZR2 741 aa20.68■□□□□ 0.9
SYNC-202ENST00000409190 TSPYL4Q9UJ04 414 aa20.67■□□□□ 0.9
SYNC-202ENST00000409190 ZSCAN23Q3MJ62 389 aa20.67■□□□□ 0.9
SYNC-202ENST00000409190 MAP4K4O95819 1239 aaPredicted RBP20.66■□□□□ 0.9
SYNC-202ENST00000409190 MSNP26038 577 aaKnown RBP20.66■□□□□ 0.9
SYNC-202ENST00000409190 PRIM1P49642 420 aaKnown RBP20.66■□□□□ 0.9
SYNC-202ENST00000409190 FAM69CQ0P6D2 419 aa20.66■□□□□ 0.9
SYNC-202ENST00000409190 UPF3BQ9BZI7 483 aaKnown RBP20.66■□□□□ 0.9
SYNC-202ENST00000409190 ESF1Q9H501 851 aaKnown RBP20.66■□□□□ 0.9
SYNC-202ENST00000409190 NSFL1CQ9UNZ2 370 aaKnown RBP20.66■□□□□ 0.9
SYNC-202ENST00000409190 CFAP74Q9C0B2 1584 aa20.66■□□□□ 0.9
SYNC-202ENST00000409190 GDPD2Q9HCC8 539 aa20.66■□□□□ 0.9
SYNC-202ENST00000409190 ANO2Q9NQ90 1003 aa20.66■□□□□ 0.9
SYNC-202ENST00000409190 LTV1Q96GA3 475 aaPredicted RBP20.66■□□□□ 0.9
SYNC-202ENST00000409190 LARP6Q9BRS8 491 aaKnown RBP20.66■□□□□ 0.9
SYNC-202ENST00000409190 METP08581 1390 aa20.65■□□□□ 0.9
SYNC-202ENST00000409190 SYCE3A1L190 88 aa20.65■□□□□ 0.9
SYNC-202ENST00000409190 RBSNQ9H1K0 784 aa20.65■□□□□ 0.9
SYNC-202ENST00000409190 NUCB2P80303 420 aa20.65■□□□□ 0.9
SYNC-202ENST00000409190 VSIG10Q8N0Z9 540 aa20.65■□□□□ 0.9
SYNC-202ENST00000409190 RTF1Q92541 710 aaKnown RBP20.65■□□□□ 0.9
SYNC-202ENST00000409190 LMBRD1Q9NUN5 540 aa20.65■□□□□ 0.9
SYNC-202ENST00000409190 ALKQ9UM73 1620 aa20.64■□□□□ 0.89
SYNC-202ENST00000409190 MAP2P11137 1827 aaKnown RBP20.64■□□□□ 0.89
SYNC-202ENST00000409190 KIAA1211Q6ZU35 1233 aa20.64■□□□□ 0.89
SYNC-202ENST00000409190 RPAP2Q8IXW5 612 aaPredicted RBP20.63■□□□□ 0.89
SYNC-202ENST00000409190 RBM10P98175 930 aaKnown RBP20.63■□□□□ 0.89
SYNC-202ENST00000409190 IL1RAPL2Q9NP60 686 aa20.63■□□□□ 0.89
SYNC-202ENST00000409190 PIK3R4Q99570 1358 aa20.63■□□□□ 0.89
SYNC-202ENST00000409190 FKBP5Q13451 457 aaPredicted RBP20.63■□□□□ 0.89
SYNC-202ENST00000409190 REC8O95072 547 aa20.62■□□□□ 0.89
SYNC-202ENST00000409190 CCDC173Q0VFZ6 552 aa20.62■□□□□ 0.89
SYNC-202ENST00000409190 RTL1A6NKG5 1358 aa20.62■□□□□ 0.89
SYNC-202ENST00000409190 ERC2O15083 957 aa20.62■□□□□ 0.89
SYNC-202ENST00000409190 GPT2Q8TD30 523 aa20.62■□□□□ 0.89
SYNC-202ENST00000409190 ISY1Q9ULR0 285 aaKnown RBP20.62■□□□□ 0.89
SYNC-202ENST00000409190 PRR36Q9H6K5 1346 aa20.62■□□□□ 0.89
SYNC-202ENST00000409190 DIP2CQ9Y2E4 1556 aa20.62■□□□□ 0.89
SYNC-202ENST00000409190 PALD1Q9ULE6 856 aa20.61■□□□□ 0.89
SYNC-202ENST00000409190 ZDHHC9Q9Y397 364 aa20.61■□□□□ 0.89
SYNC-202ENST00000409190 PDE1AP54750 535 aa20.61■□□□□ 0.89
SYNC-202ENST00000409190 XPCQ01831 940 aaPredicted RBP20.61■□□□□ 0.89
SYNC-202ENST00000409190 CHL1O00533 1208 aa20.6■□□□□ 0.89
SYNC-202ENST00000409190 PTMSP20962 102 aa20.6■□□□□ 0.89
SYNC-202ENST00000409190 SLC26A8Q96RN1 970 aa20.6■□□□□ 0.89
SYNC-202ENST00000409190 CPS1P31327 1500 aa20.6■□□□□ 0.89
SYNC-202ENST00000409190 HMMRO75330 724 aa20.59■□□□□ 0.89
SYNC-202ENST00000409190 R3HCC1Q9Y3T6 440 aaKnown RBP20.59■□□□□ 0.89
SYNC-202ENST00000409190 MTHFSDQ2M296 383 aaKnown RBP20.59■□□□□ 0.89
SYNC-202ENST00000409190 ACEP12821 1306 aa20.59■□□□□ 0.89
SYNC-202ENST00000409190 TMX3Q96JJ7 454 aa20.59■□□□□ 0.89
SYNC-202ENST00000409190 EDC4Q6P2E9 1401 aaKnown RBP20.58■□□□□ 0.89
SYNC-202ENST00000409190 PNMA6EA0A0J9YXQ4 647 aa20.58■□□□□ 0.89
SYNC-202ENST00000409190 C14orf37Q86TY3 774 aa20.58■□□□□ 0.89
SYNC-202ENST00000409190 TMEM63CQ9P1W3 806 aa20.58■□□□□ 0.89
SYNC-202ENST00000409190 ARHGAP31Q2M1Z3 1444 aa20.58■□□□□ 0.88
SYNC-202ENST00000409190 ATP10DQ9P241 1426 aa20.58■□□□□ 0.88
SYNC-202ENST00000409190 ZSCAN30Q86W11 494 aa20.58■□□□□ 0.88
SYNC-202ENST00000409190 STK31Q9BXU1 1019 aa20.57■□□□□ 0.88
SYNC-202ENST00000409190 NUTM1Q86Y26 1132 aa20.57■□□□□ 0.88
SYNC-202ENST00000409190 TMEM131LA2VDJ0 1609 aa20.56■□□□□ 0.88
SYNC-202ENST00000409190 AMPHP49418 695 aa20.56■□□□□ 0.88
SYNC-202ENST00000409190 UNC5CLQ8IV45 518 aa20.56■□□□□ 0.88
SYNC-202ENST00000409190 TTC21BQ7Z4L5 1316 aa20.55■□□□□ 0.88
SYNC-202ENST00000409190 MAP3K19Q56UN5 1328 aa20.55■□□□□ 0.88
SYNC-202ENST00000409190 GNAI2P04899 355 aa20.54■□□□□ 0.88
SYNC-202ENST00000409190 PTMAP06454 111 aaKnown RBP20.54■□□□□ 0.88
SYNC-202ENST00000409190 LRRFIP2Q9Y608 721 aaKnown RBP20.54■□□□□ 0.88
SYNC-202ENST00000409190 EIF2S2P20042 333 aaKnown RBP20.54■□□□□ 0.88
SYNC-202ENST00000409190 PLCB2Q00722 1185 aa20.53■□□□□ 0.88
SYNC-202ENST00000409190 KNDC1Q76NI1 1749 aa20.53■□□□□ 0.88
SYNC-202ENST00000409190 FAM13BQ9NYF5 915 aa20.53■□□□□ 0.88
SYNC-202ENST00000409190 CYP2E1P05181 493 aaPredicted RBP20.52■□□□□ 0.88
SYNC-202ENST00000409190 DDX54Q8TDD1 881 aaKnown RBP20.52■□□□□ 0.88
SYNC-202ENST00000409190 LRRCC1Q9C099 1032 aa20.52■□□□□ 0.88
SYNC-202ENST00000409190 MX1P20591 662 aa20.52■□□□□ 0.88
SYNC-202ENST00000409190 USHBP1Q8N6Y0 703 aa20.52■□□□□ 0.88
SYNC-202ENST00000409190 ATP7BP35670 1465 aa20.52■□□□□ 0.88
SYNC-202ENST00000409190 RGS12O14924 1447 aa20.52■□□□□ 0.88
SYNC-202ENST00000409190 HAP1P54257 671 aaPredicted RBP20.52■□□□□ 0.88
SYNC-202ENST00000409190 NGDNQ8NEJ9 315 aaKnown RBP20.52■□□□□ 0.88
SYNC-202ENST00000409190 KIF20BQ96Q89 1820 aa20.52■□□□□ 0.87
SYNC-202ENST00000409190 CPSF1Q10570 1443 aaKnown RBP20.51■□□□□ 0.87
SYNC-202ENST00000409190 PPP1R9BQ96SB3 815 aa20.51■□□□□ 0.87
SYNC-202ENST00000409190 CWC22Q9HCG8 908 aaKnown RBP20.51■□□□□ 0.87
SYNC-202ENST00000409190 CDK12Q9NYV4 1490 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms