RNA–Protein interactions for RNA: ENST00000409056.3

TMEFF2-203, Transcript of transmembrane protein with EGF like and two follistatin like domains 2, humanhuman

TSL 1 (best) BASIC

Gene TMEFF2, Length 3,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF2-203ENST00000409056 PTCH1Q13635 1447 aa8.63□□□□□ -1.03
TMEFF2-203ENST00000409056 ATP10DQ9P241 1426 aa8.63□□□□□ -1.03
TMEFF2-203ENST00000409056 CPS1P31327 1500 aa8.63□□□□□ -1.03
TMEFF2-203ENST00000409056 LMTK2Q8IWU2 1503 aa8.63□□□□□ -1.03
TMEFF2-203ENST00000409056 NEURL4Q96JN8 1562 aa8.63□□□□□ -1.03
TMEFF2-203ENST00000409056 GADD45BO75293 160 aaPredicted RBP8.63□□□□□ -1.03
TMEFF2-203ENST00000409056 HSP90AB2PQ58FF8 381 aa8.63□□□□□ -1.03
TMEFF2-203ENST00000409056 DCTPP1Q9H773 170 aa8.63□□□□□ -1.03
TMEFF2-203ENST00000409056 FAM13BQ9NYF5 915 aa8.63□□□□□ -1.03
TMEFF2-203ENST00000409056 CYP2E1P05181 493 aaPredicted RBP8.62□□□□□ -1.03
TMEFF2-203ENST00000409056 KLHL40Q2TBA0 621 aa8.62□□□□□ -1.03
TMEFF2-203ENST00000409056 DDX54Q8TDD1 881 aaKnown RBP8.62□□□□□ -1.03
TMEFF2-203ENST00000409056 PKNOX2Q96KN3 472 aa8.62□□□□□ -1.03
TMEFF2-203ENST00000409056 ARAP3Q8WWN8 1544 aa8.62□□□□□ -1.03
TMEFF2-203ENST00000409056 COL9A3Q14050 684 aaPredicted RBP8.62□□□□□ -1.03
TMEFF2-203ENST00000409056 TCHHQ07283 1943 aa8.62□□□□□ -1.03
TMEFF2-203ENST00000409056 PLEKHG5O94827 1062 aa8.62□□□□□ -1.03
TMEFF2-203ENST00000409056 SLC4A2P04920 1241 aa8.62□□□□□ -1.03
TMEFF2-203ENST00000409056 CFAP44Q96MT7 982 aa8.62□□□□□ -1.03
TMEFF2-203ENST00000409056 IFT57Q9NWB7 429 aa8.62□□□□□ -1.03
TMEFF2-203ENST00000409056 ARHGEF40Q8TER5 1519 aa8.62□□□□□ -1.03
TMEFF2-203ENST00000409056 RIMS2Q9UQ26 1411 aa8.62□□□□□ -1.03
TMEFF2-203ENST00000409056 RPGRIP1LQ68CZ1 1315 aa8.62□□□□□ -1.03
TMEFF2-203ENST00000409056 RIMS1Q86UR5 1692 aaKnown RBP8.62□□□□□ -1.03
TMEFF2-203ENST00000409056 CPA1P15085 419 aa8.61□□□□□ -1.03
TMEFF2-203ENST00000409056 NEK4P51957 841 aa8.61□□□□□ -1.03
TMEFF2-203ENST00000409056 GNAI1P63096 354 aa8.61□□□□□ -1.03
TMEFF2-203ENST00000409056 PLPPR3Q6T4P5 718 aa8.61□□□□□ -1.03
TMEFF2-203ENST00000409056 CIZ1Q9ULV3 898 aaPredicted RBP8.61□□□□□ -1.03
TMEFF2-203ENST00000409056 PNMA6EA0A0J9YXQ4 647 aa8.61□□□□□ -1.03
TMEFF2-203ENST00000409056 PIK3R4Q99570 1358 aa8.61□□□□□ -1.03
TMEFF2-203ENST00000409056 EIF4A2Q14240 407 aaKnown RBP8.61□□□□□ -1.03
TMEFF2-203ENST00000409056 PPP1R9BQ96SB3 815 aa8.61□□□□□ -1.03
TMEFF2-203ENST00000409056 RTL1A6NKG5 1358 aa8.6□□□□□ -1.03
TMEFF2-203ENST00000409056 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.6□□□□□ -1.03
TMEFF2-203ENST00000409056 IL1RAPL2Q9NP60 686 aa8.6□□□□□ -1.03
TMEFF2-203ENST00000409056 KIF20BQ96Q89 1820 aa8.6□□□□□ -1.03
TMEFF2-203ENST00000409056 CALD1Q05682 793 aaKnown RBP8.6□□□□□ -1.03
TMEFF2-203ENST00000409056 ZSCAN30Q86W11 494 aa8.6□□□□□ -1.03
TMEFF2-203ENST00000409056 ANKRD44Q8N8A2 993 aa8.6□□□□□ -1.03
TMEFF2-203ENST00000409056 BCL11BQ9C0K0 894 aaPredicted RBP8.6□□□□□ -1.03
TMEFF2-203ENST00000409056 PRDM10Q9NQV6 1147 aa8.6□□□□□ -1.03
TMEFF2-203ENST00000409056 PRR36Q9H6K5 1346 aa8.6□□□□□ -1.03
TMEFF2-203ENST00000409056 METP08581 1390 aa8.6□□□□□ -1.03
TMEFF2-203ENST00000409056 NUTM2GQ5VZR2 741 aa8.59□□□□□ -1.03
TMEFF2-203ENST00000409056 RILPL2Q969X0 211 aa8.59□□□□□ -1.03
TMEFF2-203ENST00000409056 TMX3Q96JJ7 454 aa8.59□□□□□ -1.03
TMEFF2-203ENST00000409056 CCDC173Q0VFZ6 552 aa8.59□□□□□ -1.03
TMEFF2-203ENST00000409056 ALKQ9UM73 1620 aa8.59□□□□□ -1.03
TMEFF2-203ENST00000409056 ANKRD26Q9UPS8 1709 aa8.59□□□□□ -1.03
TMEFF2-203ENST00000409056 RABEP1Q15276 862 aa8.59□□□□□ -1.03
TMEFF2-203ENST00000409056 NUDT16Q96DE0 195 aaKnown RBP8.59□□□□□ -1.03
TMEFF2-203ENST00000409056 PDE1AP54750 535 aa8.58□□□□□ -1.04
TMEFF2-203ENST00000409056 NUTM1Q86Y26 1132 aa8.58□□□□□ -1.04
TMEFF2-203ENST00000409056 ARHGAP45Q92619 1136 aa8.58□□□□□ -1.04
TMEFF2-203ENST00000409056 TMEM131LA2VDJ0 1609 aa8.58□□□□□ -1.04
TMEFF2-203ENST00000409056 RRP9O43818 475 aaKnown RBP8.58□□□□□ -1.04
TMEFF2-203ENST00000409056 NPM1P06748 294 aaKnown RBP eCLIP8.58□□□□□ -1.04
TMEFF2-203ENST00000409056 BRPF1P55201 1214 aaPredicted RBP8.58□□□□□ -1.04
TMEFF2-203ENST00000409056 SKOR2Q2VWA4 1001 aaPredicted RBP8.58□□□□□ -1.04
TMEFF2-203ENST00000409056 TRIM6-TRIM34B2RNG4 842 aa8.57□□□□□ -1.04
TMEFF2-203ENST00000409056 GOLGA6L22H0YM25 854 aa8.57□□□□□ -1.04
TMEFF2-203ENST00000409056 MSNP26038 577 aaKnown RBP8.57□□□□□ -1.04
TMEFF2-203ENST00000409056 ZNF445P59923 1031 aa8.57□□□□□ -1.04
TMEFF2-203ENST00000409056 INTS3Q68E01 1043 aaKnown RBP8.57□□□□□ -1.04
TMEFF2-203ENST00000409056 ANO2Q9NQ90 1003 aa8.57□□□□□ -1.04
TMEFF2-203ENST00000409056 OFD1O75665 1012 aa8.57□□□□□ -1.04
TMEFF2-203ENST00000409056 COG3Q96JB2 828 aa8.57□□□□□ -1.04
TMEFF2-203ENST00000409056 API5Q9BZZ5 524 aaKnown RBP8.57□□□□□ -1.04
TMEFF2-203ENST00000409056 DIP2CQ9Y2E4 1556 aa8.57□□□□□ -1.04
TMEFF2-203ENST00000409056 MLH3Q9UHC1 1453 aa8.57□□□□□ -1.04
TMEFF2-203ENST00000409056 ANXA1P04083 346 aa8.56□□□□□ -1.04
TMEFF2-203ENST00000409056 UQCRHLA0A096LP55 91 aa8.56□□□□□ -1.04
TMEFF2-203ENST00000409056 WASLO00401 505 aaPredicted RBP8.56□□□□□ -1.04
TMEFF2-203ENST00000409056 UQCRHP07919 91 aa8.56□□□□□ -1.04
TMEFF2-203ENST00000409056 MTHFSDQ2M296 383 aaKnown RBP8.56□□□□□ -1.04
TMEFF2-203ENST00000409056 NCBP3Q53F19 620 aaKnown RBP8.56□□□□□ -1.04
TMEFF2-203ENST00000409056 CLEC17AQ6ZS10 378 aa8.56□□□□□ -1.04
TMEFF2-203ENST00000409056 PUS7Q96PZ0 661 aaKnown RBP8.56□□□□□ -1.04
TMEFF2-203ENST00000409056 CHL1O00533 1208 aa8.55□□□□□ -1.04
TMEFF2-203ENST00000409056 USHBP1Q8N6Y0 703 aa8.55□□□□□ -1.04
TMEFF2-203ENST00000409056 TTC12Q9H892 705 aaPredicted RBP8.55□□□□□ -1.04
TMEFF2-203ENST00000409056 MAP3K19Q56UN5 1328 aa8.55□□□□□ -1.04
TMEFF2-203ENST00000409056 ERC2O15083 957 aa8.55□□□□□ -1.04
TMEFF2-203ENST00000409056 LARGE1O95461 756 aa8.55□□□□□ -1.04
TMEFF2-203ENST00000409056 LTV1Q96GA3 475 aaPredicted RBP8.55□□□□□ -1.04
TMEFF2-203ENST00000409056 PDLIM2Q96JY6 352 aa8.55□□□□□ -1.04
TMEFF2-203ENST00000409056 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.55□□□□□ -1.04
TMEFF2-203ENST00000409056 SLC52A1Q9NWF4 448 aa8.55□□□□□ -1.04
TMEFF2-203ENST00000409056 CNPY2Q9Y2B0 182 aa8.55□□□□□ -1.04
TMEFF2-203ENST00000409056 CHMP3Q9Y3E7 222 aa8.55□□□□□ -1.04
TMEFF2-203ENST00000409056 LRRFIP2Q9Y608 721 aaKnown RBP8.55□□□□□ -1.04
TMEFF2-203ENST00000409056 AP5Z1O43299 807 aa8.54□□□□□ -1.04
TMEFF2-203ENST00000409056 ZFYVE9O95405 1425 aa8.54□□□□□ -1.04
TMEFF2-203ENST00000409056 PLCB2Q00722 1185 aa8.54□□□□□ -1.04
TMEFF2-203ENST00000409056 USP25Q9UHP3 1055 aa8.54□□□□□ -1.04
TMEFF2-203ENST00000409056 NOL7Q9UMY1 257 aaKnown RBP8.54□□□□□ -1.04
TMEFF2-203ENST00000409056 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.54□□□□□ -1.04
TMEFF2-203ENST00000409056 PREX1Q8TCU6 1659 aa8.54□□□□□ -1.04
TMEFF2-203ENST00000409056 CDC42BPGQ6DT37 1551 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms