RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 LTN1O94822 1766 aa12.74□□□□□ -0.37
POLR1A-202ENST00000409024 GLI3P10071 1580 aa12.73□□□□□ -0.37
POLR1A-202ENST00000409024 CPDO75976 1380 aa12.73□□□□□ -0.37
POLR1A-202ENST00000409024 SENP3-EIF4A1A0A087X0R7 540 aa12.73□□□□□ -0.37
POLR1A-202ENST00000409024 XPCQ01831 940 aaPredicted RBP12.73□□□□□ -0.37
POLR1A-202ENST00000409024 EN1Q05925 392 aaPredicted RBP12.73□□□□□ -0.37
POLR1A-202ENST00000409024 LMOD2Q6P5Q4 547 aa12.73□□□□□ -0.37
POLR1A-202ENST00000409024 GAS2L2Q8NHY3 880 aa12.73□□□□□ -0.37
POLR1A-202ENST00000409024 PHACTR3Q96KR7 559 aa12.73□□□□□ -0.37
POLR1A-202ENST00000409024 SLIT2O94813 1529 aa12.72□□□□□ -0.37
POLR1A-202ENST00000409024 BRWD3Q6RI45 1802 aa12.72□□□□□ -0.37
POLR1A-202ENST00000409024 RRP1P56182 461 aaKnown RBP12.72□□□□□ -0.37
POLR1A-202ENST00000409024 VPS72Q15906 364 aa12.72□□□□□ -0.37
POLR1A-202ENST00000409024 ZNF428Q96B54 188 aa12.72□□□□□ -0.37
POLR1A-202ENST00000409024 CCDC9Q9Y3X0 531 aaKnown RBP12.72□□□□□ -0.37
POLR1A-202ENST00000409024 NCAPD2Q15021 1401 aa12.71□□□□□ -0.37
POLR1A-202ENST00000409024 GNAI1P63096 354 aa12.71□□□□□ -0.37
POLR1A-202ENST00000409024 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
POLR1A-202ENST00000409024 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.71□□□□□ -0.38
POLR1A-202ENST00000409024 IFT57Q9NWB7 429 aa12.7□□□□□ -0.38
POLR1A-202ENST00000409024 A0A0G2JS52 829 aa12.69□□□□□ -0.38
POLR1A-202ENST00000409024 MYT1Q01538 1121 aa12.69□□□□□ -0.38
POLR1A-202ENST00000409024 AEBP1Q8IUX7 1158 aa12.69□□□□□ -0.38
POLR1A-202ENST00000409024 CRYBG1Q9Y4K1 1723 aa12.68□□□□□ -0.38
POLR1A-202ENST00000409024 ZNF853P0CG23 659 aa12.68□□□□□ -0.38
POLR1A-202ENST00000409024 HAP1P54257 671 aaPredicted RBP12.68□□□□□ -0.38
POLR1A-202ENST00000409024 CFAP44Q96MT7 982 aa12.68□□□□□ -0.38
POLR1A-202ENST00000409024 BABAM1Q9NWV8 329 aa12.68□□□□□ -0.38
POLR1A-202ENST00000409024 PPP4R2Q9NY27 417 aa12.68□□□□□ -0.38
POLR1A-202ENST00000409024 CAMTA1Q9Y6Y1 1673 aa12.67□□□□□ -0.38
POLR1A-202ENST00000409024 FANCIQ9NVI1 1328 aa12.67□□□□□ -0.38
POLR1A-202ENST00000409024 AMOTQ4VCS5 1084 aa12.67□□□□□ -0.38
POLR1A-202ENST00000409024 ANKRD24Q8TF21 1146 aa12.67□□□□□ -0.38
POLR1A-202ENST00000409024 NBPF6Q5VWK0 638 aa12.66□□□□□ -0.38
POLR1A-202ENST00000409024 RTF1Q92541 710 aaKnown RBP12.66□□□□□ -0.38
POLR1A-202ENST00000409024 NBPF4Q96M43 638 aa12.66□□□□□ -0.38
POLR1A-202ENST00000409024 FAM208AQ9UK61 1670 aaKnown RBP12.66□□□□□ -0.38
POLR1A-202ENST00000409024 ERBB3P21860 1342 aa12.65□□□□□ -0.38
POLR1A-202ENST00000409024 MTHFSDQ2M296 383 aaKnown RBP12.65□□□□□ -0.38
POLR1A-202ENST00000409024 PLEKHO1Q53GL0 409 aaPredicted RBP12.65□□□□□ -0.38
POLR1A-202ENST00000409024 PELP1Q8IZL8 1130 aaKnown RBP12.65□□□□□ -0.38
POLR1A-202ENST00000409024 LTV1Q96GA3 475 aaPredicted RBP12.65□□□□□ -0.38
POLR1A-202ENST00000409024 PPP1R1BQ9UD71 204 aaPredicted RBP12.65□□□□□ -0.38
POLR1A-202ENST00000409024 COL18A1P39060 1754 aa12.65□□□□□ -0.38
POLR1A-202ENST00000409024 GNAT3A8MTJ3 354 aa12.64□□□□□ -0.39
POLR1A-202ENST00000409024 MS4A1P11836 297 aa12.64□□□□□ -0.39
POLR1A-202ENST00000409024 RARSP54136 660 aaKnown RBP12.64□□□□□ -0.39
POLR1A-202ENST00000409024 BRPF1P55201 1214 aaPredicted RBP12.64□□□□□ -0.39
POLR1A-202ENST00000409024 ZC3H6P61129 1189 aaKnown RBP12.64□□□□□ -0.39
POLR1A-202ENST00000409024 AAMPQ13685 434 aa12.64□□□□□ -0.39
POLR1A-202ENST00000409024 PDE3AQ14432 1141 aa12.64□□□□□ -0.39
POLR1A-202ENST00000409024 EZH2Q15910 746 aaKnown RBP12.64□□□□□ -0.39
POLR1A-202ENST00000409024 ALDH1L2Q3SY69 923 aa12.64□□□□□ -0.39
POLR1A-202ENST00000409024 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.64□□□□□ -0.393e-6■■□□□ 12.2
POLR1A-202ENST00000409024 DLG5Q8TDM6 1919 aa12.64□□□□□ -0.39
POLR1A-202ENST00000409024 LMO7Q8WWI1 1683 aa12.64□□□□□ -0.39
POLR1A-202ENST00000409024 CHL1O00533 1208 aa12.63□□□□□ -0.39
POLR1A-202ENST00000409024 FAM98CQ17RN3 349 aaKnown RBP12.63□□□□□ -0.39
POLR1A-202ENST00000409024 AXIN2Q9Y2T1 843 aa12.63□□□□□ -0.39
POLR1A-202ENST00000409024 SOS1Q07889 1333 aaPredicted RBP12.62□□□□□ -0.39
POLR1A-202ENST00000409024 DISP2A7MBM2 1401 aa12.62□□□□□ -0.39
POLR1A-202ENST00000409024 KIAA0232Q92628 1395 aa12.62□□□□□ -0.39
POLR1A-202ENST00000409024 MAP3K5Q99683 1374 aa12.62□□□□□ -0.39
POLR1A-202ENST00000409024 ZBTB7CA1YPR0 619 aa12.62□□□□□ -0.39
POLR1A-202ENST00000409024 EXOSC9Q06265 439 aaKnown RBP12.62□□□□□ -0.39
POLR1A-202ENST00000409024 OVOS2A0A0G2JMS6 1433 aa12.62□□□□□ -0.39
POLR1A-202ENST00000409024 CRB1P82279 1406 aa12.62□□□□□ -0.39
POLR1A-202ENST00000409024 AKAP4Q5JQC9 854 aa12.61□□□□□ -0.39
POLR1A-202ENST00000409024 ZNF784Q8NCA9 323 aaPredicted RBP12.61□□□□□ -0.39
POLR1A-202ENST00000409024 CAMKK2Q96RR4 588 aa12.61□□□□□ -0.39
POLR1A-202ENST00000409024 FAM182BQ5T319 152 aa12.6□□□□□ -0.39
POLR1A-202ENST00000409024 NBPF14Q5TI25 921 aa12.6□□□□□ -0.39
POLR1A-202ENST00000409024 CABLES1Q8TDN4 633 aa12.6□□□□□ -0.39
POLR1A-202ENST00000409024 TSR2Q969E8 191 aaKnown RBP12.6□□□□□ -0.39
POLR1A-202ENST00000409024 CHMP4AQ9BY43 222 aa12.6□□□□□ -0.39
POLR1A-202ENST00000409024 SPON1Q9HCB6 807 aa12.6□□□□□ -0.39
POLR1A-202ENST00000409024 PRDM11Q9NQV5 511 aa12.6□□□□□ -0.39
POLR1A-202ENST00000409024 MBIPQ9NS73 344 aa12.6□□□□□ -0.39
POLR1A-202ENST00000409024 ABCA3Q99758 1704 aa12.59□□□□□ -0.39
POLR1A-202ENST00000409024 FAM83GA6ND36 823 aa12.59□□□□□ -0.39
POLR1A-202ENST00000409024 IPO8O15397 1037 aaKnown RBP12.59□□□□□ -0.39
POLR1A-202ENST00000409024 IRX6P78412 446 aaPredicted RBP12.59□□□□□ -0.39
POLR1A-202ENST00000409024 RAPGEF4Q8WZA2 1011 aa12.59□□□□□ -0.39
POLR1A-202ENST00000409024 WDR17Q8IZU2 1322 aa12.59□□□□□ -0.39
POLR1A-202ENST00000409024 KIF16BQ96L93 1317 aa12.59□□□□□ -0.39
POLR1A-202ENST00000409024 CEMIPQ8WUJ3 1361 aa12.58□□□□□ -0.4
POLR1A-202ENST00000409024 KCNQ2O43526 872 aa12.58□□□□□ -0.4
POLR1A-202ENST00000409024 VAMP4O75379 141 aa12.58□□□□□ -0.4
POLR1A-202ENST00000409024 BCAR3O75815 825 aa12.58□□□□□ -0.4
POLR1A-202ENST00000409024 PLEKHG5O94827 1062 aa12.58□□□□□ -0.4
POLR1A-202ENST00000409024 TATP17735 454 aaPredicted RBP12.58□□□□□ -0.4
POLR1A-202ENST00000409024 C1QTNF8P60827 252 aa12.58□□□□□ -0.4
POLR1A-202ENST00000409024 TAF7Q15545 349 aaPredicted RBP12.58□□□□□ -0.4
POLR1A-202ENST00000409024 SPG7Q9UQ90 795 aa12.58□□□□□ -0.4
POLR1A-202ENST00000409024 LAS1LQ9Y4W2 734 aaKnown RBP12.58□□□□□ -0.4
POLR1A-202ENST00000409024 LRRC37A3O60309 1634 aa12.58□□□□□ -0.4
POLR1A-202ENST00000409024 TRIM37O94972 964 aa12.57□□□□□ -0.4
POLR1A-202ENST00000409024 APBA3O96018 575 aa12.57□□□□□ -0.4
POLR1A-202ENST00000409024 CSB-PGBD3P0DP91 1061 aa12.57□□□□□ -0.4
POLR1A-202ENST00000409024 C1orf141Q5JVX7 400 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms