RNA–Protein interactions for RNA: ENST00000408968.3

IFITM1-202, Transcript of interferon induced transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFITM1, Length 855 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-202ENST00000408968 EN1Q05925 392 aaPredicted RBP18.17■□□□□ 0.5
IFITM1-202ENST00000408968 MORC1Q86VD1 984 aa18.17■□□□□ 0.5
IFITM1-202ENST00000408968 PPM1GO15355 546 aaPredicted RBP18.16■□□□□ 0.5
IFITM1-202ENST00000408968 TATP17735 454 aaPredicted RBP18.16■□□□□ 0.5
IFITM1-202ENST00000408968 POLKQ9UBT6 870 aa18.16■□□□□ 0.5
IFITM1-202ENST00000408968 PLSCR1O15162 318 aa18.15■□□□□ 0.5
IFITM1-202ENST00000408968 NBPF6Q5VWK0 638 aa18.15■□□□□ 0.5
IFITM1-202ENST00000408968 NBPF4Q96M43 638 aa18.15■□□□□ 0.5
IFITM1-202ENST00000408968 CAMKK2Q96RR4 588 aa18.15■□□□□ 0.5
IFITM1-202ENST00000408968 LRP5O75197 1615 aa18.15■□□□□ 0.5
IFITM1-202ENST00000408968 AMER1Q5JTC6 1135 aaPredicted RBP18.14■□□□□ 0.49
IFITM1-202ENST00000408968 PCDH11XQ9BZA7 1347 aa18.14■□□□□ 0.49
IFITM1-202ENST00000408968 PCDH11YQ9BZA8 1340 aa18.14■□□□□ 0.49
IFITM1-202ENST00000408968 ZCRB1Q8TBF4 217 aaKnown RBP18.13■□□□□ 0.49
IFITM1-202ENST00000408968 TNNT2P45379 298 aaPredicted RBP18.12■□□□□ 0.49
IFITM1-202ENST00000408968 EZH2Q15910 746 aaKnown RBP18.12■□□□□ 0.49
IFITM1-202ENST00000408968 NBPF14Q5TI25 921 aa18.11■□□□□ 0.49
IFITM1-202ENST00000408968 PER1O15534 1290 aaPredicted RBP18.09■□□□□ 0.49
IFITM1-202ENST00000408968 USHBP1Q8N6Y0 703 aa18.09■□□□□ 0.49
IFITM1-202ENST00000408968 DDX54Q8TDD1 881 aaKnown RBP18.09■□□□□ 0.49
IFITM1-202ENST00000408968 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.09■□□□□ 0.49
IFITM1-202ENST00000408968 LY75O60449 1722 aa18.09■□□□□ 0.49
IFITM1-202ENST00000408968 IGSF1Q8N6C5 1336 aa18.08■□□□□ 0.49
IFITM1-202ENST00000408968 EIF4A2Q14240 407 aaKnown RBP18.08■□□□□ 0.48
IFITM1-202ENST00000408968 SPG7Q9UQ90 795 aa18.08■□□□□ 0.48
IFITM1-202ENST00000408968 ITGB4P16144 1822 aa18.07■□□□□ 0.48
IFITM1-202ENST00000408968 HMGB2P26583 209 aaKnown RBP18.06■□□□□ 0.48
IFITM1-202ENST00000408968 EYA1Q99502 592 aa18.06■□□□□ 0.48
IFITM1-202ENST00000408968 TOGARAM1Q9Y4F4 1720 aa18.06■□□□□ 0.48
IFITM1-202ENST00000408968 PAPPAQ13219 1627 aa18.05■□□□□ 0.48
IFITM1-202ENST00000408968 QSER1Q2KHR3 1735 aa18.05■□□□□ 0.48
IFITM1-202ENST00000408968 ACSBG1Q96GR2 724 aa18.04■□□□□ 0.48
IFITM1-202ENST00000408968 KDRP35968 1356 aa18.03■□□□□ 0.48
IFITM1-202ENST00000408968 KCNQ2O43526 872 aa18.02■□□□□ 0.48
IFITM1-202ENST00000408968 CC2D1BQ5T0F9 858 aaKnown RBP18.02■□□□□ 0.48
IFITM1-202ENST00000408968 ZEB1P37275 1124 aaPredicted RBP18.01■□□□□ 0.47
IFITM1-202ENST00000408968 R3HDM1Q15032 1099 aaKnown RBP18.01■□□□□ 0.47
IFITM1-202ENST00000408968 TXNRD1Q16881 649 aa18.01■□□□□ 0.47
IFITM1-202ENST00000408968 SLC27A3Q5K4L6 730 aa18.01■□□□□ 0.47
IFITM1-202ENST00000408968 CASZ1Q86V15 1759 aa18.01■□□□□ 0.47
IFITM1-202ENST00000408968 AMOTQ4VCS5 1084 aa18■□□□□ 0.47
IFITM1-202ENST00000408968 SYTL4Q96C24 671 aaPredicted RBP18■□□□□ 0.47
IFITM1-202ENST00000408968 PSDA5PKW4 1024 aaPredicted RBP17.99■□□□□ 0.47
IFITM1-202ENST00000408968 HSP90AB1P08238 724 aaKnown RBP17.99■□□□□ 0.47
IFITM1-202ENST00000408968 MTHFSP49914 203 aa17.99■□□□□ 0.47
IFITM1-202ENST00000408968 PTF1AQ7RTS3 328 aa17.99■□□□□ 0.47
IFITM1-202ENST00000408968 IFNL2Q8IZJ0 200 aa17.99■□□□□ 0.47
IFITM1-202ENST00000408968 C5P01031 1676 aa17.99■□□□□ 0.47
IFITM1-202ENST00000408968 CYP27B1O15528 508 aa17.98■□□□□ 0.47
IFITM1-202ENST00000408968 HOXD11P31277 338 aaPredicted RBP17.98■□□□□ 0.47
IFITM1-202ENST00000408968 PRIM1P49642 420 aaKnown RBP17.98■□□□□ 0.47
IFITM1-202ENST00000408968 NKX1-1Q15270 411 aaPredicted RBP17.98■□□□□ 0.47
IFITM1-202ENST00000408968 STK32BQ9NY57 414 aa17.98■□□□□ 0.47
IFITM1-202ENST00000408968 COL3A1P02461 1466 aaPredicted RBP17.98■□□□□ 0.47
IFITM1-202ENST00000408968 VIRMAQ69YN4 1812 aaKnown RBP17.98■□□□□ 0.47
IFITM1-202ENST00000408968 DCAF8L1A6NGE4 600 aa17.97■□□□□ 0.47
IFITM1-202ENST00000408968 IL13P35225 146 aa17.97■□□□□ 0.47
IFITM1-202ENST00000408968 PLEKHO1Q53GL0 409 aaPredicted RBP17.97■□□□□ 0.47
IFITM1-202ENST00000408968 CFAP53Q96M91 514 aa17.97■□□□□ 0.47
IFITM1-202ENST00000408968 TAF1LQ8IZX4 1826 aa17.97■□□□□ 0.47
IFITM1-202ENST00000408968 DIAPH1O60610 1272 aaKnown RBP17.96■□□□□ 0.47
IFITM1-202ENST00000408968 SCN11AQ9UI33 1791 aa17.96■□□□□ 0.47
IFITM1-202ENST00000408968 PHKG2P15735 406 aa17.95■□□□□ 0.46
IFITM1-202ENST00000408968 SMARCC1Q92922 1105 aaPredicted RBP17.95■□□□□ 0.46
IFITM1-202ENST00000408968 ZNF831Q5JPB2 1677 aa17.95■□□□□ 0.46
IFITM1-202ENST00000408968 PROM2Q8N271 834 aa17.94■□□□□ 0.46
IFITM1-202ENST00000408968 TUBGCP6Q96RT7 1819 aa17.93■□□□□ 0.46
IFITM1-202ENST00000408968 C1orf141Q5JVX7 400 aa17.93■□□□□ 0.46
IFITM1-202ENST00000408968 SULT6B1Q6IMI4 303 aa17.93■□□□□ 0.46
IFITM1-202ENST00000408968 CNKSR2Q8WXI2 1034 aa17.93■□□□□ 0.46
IFITM1-202ENST00000408968 ANO8Q9HCE9 1232 aaPredicted RBP17.93■□□□□ 0.46
IFITM1-202ENST00000408968 PALLDQ8WX93 1383 aa17.92■□□□□ 0.46
IFITM1-202ENST00000408968 SLC15A2Q16348 729 aa17.92■□□□□ 0.46
IFITM1-202ENST00000408968 DCAF5Q96JK2 942 aa17.92■□□□□ 0.46
IFITM1-202ENST00000408968 ZNF530Q6P9A1 599 aaPredicted RBP17.91■□□□□ 0.46
IFITM1-202ENST00000408968 TMOD3Q9NYL9 352 aa17.91■□□□□ 0.46
IFITM1-202ENST00000408968 ERVV-2B6SEH9 535 aa17.9■□□□□ 0.46
IFITM1-202ENST00000408968 MPRIPQ6WCQ1 1025 aa17.9■□□□□ 0.46
IFITM1-202ENST00000408968 CCNL1Q9UK58 526 aaPredicted RBP17.9■□□□□ 0.46
IFITM1-202ENST00000408968 ADAMTS7Q9UKP4 1686 aa17.9■□□□□ 0.46
IFITM1-202ENST00000408968 AEBP1Q8IUX7 1158 aa17.89■□□□□ 0.45
IFITM1-202ENST00000408968 SPON1Q9HCB6 807 aa17.89■□□□□ 0.45
IFITM1-202ENST00000408968 NUDCQ9Y266 331 aa17.89■□□□□ 0.45
IFITM1-202ENST00000408968 CICQ96RK0 1608 aaPredicted RBP17.89■□□□□ 0.45
IFITM1-202ENST00000408968 SRCAPQ6ZRS2 3230 aa17.88■□□□□ 0.45
IFITM1-202ENST00000408968 C4BP0C0L5 1744 aa17.88■□□□□ 0.45
IFITM1-202ENST00000408968 MRC1P22897 1456 aa17.88■□□□□ 0.45
IFITM1-202ENST00000408968 KDM6AO15550 1401 aaPredicted RBP17.87■□□□□ 0.45
IFITM1-202ENST00000408968 COL24A1Q17RW2 1714 aa17.86■□□□□ 0.45
IFITM1-202ENST00000408968 PPP2R1AP30153 589 aa17.86■□□□□ 0.45
IFITM1-202ENST00000408968 CNGB1Q14028 1251 aaPredicted RBP17.86■□□□□ 0.45
IFITM1-202ENST00000408968 AKAP4Q5JQC9 854 aa17.86■□□□□ 0.45
IFITM1-202ENST00000408968 LRRC4BQ9NT99 713 aa17.86■□□□□ 0.45
IFITM1-202ENST00000408968 U2SURPO15042 1029 aaKnown RBP17.85■□□□□ 0.45
IFITM1-202ENST00000408968 COL5A3P25940 1745 aaPredicted RBP17.85■□□□□ 0.45
IFITM1-202ENST00000408968 PIGBQ92521 554 aa17.85■□□□□ 0.45
IFITM1-202ENST00000408968 UBR3Q6ZT12 1888 aa17.84■□□□□ 0.45
IFITM1-202ENST00000408968 HMOX1P09601 288 aa17.84■□□□□ 0.45
IFITM1-202ENST00000408968 AKT1S1Q96B36 256 aa17.84■□□□□ 0.45
IFITM1-202ENST00000408968 GAS2L2Q8NHY3 880 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms