RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 GRIN3BO60391 1043 aa17.34■□□□□ 0.37
APOBEC3B-204ENST00000407298 AMPHP49418 695 aa17.34■□□□□ 0.37
APOBEC3B-204ENST00000407298 QSER1Q2KHR3 1735 aa17.34■□□□□ 0.37
APOBEC3B-204ENST00000407298 PNPLA7Q6ZV29 1317 aa17.34■□□□□ 0.37
APOBEC3B-204ENST00000407298 ANKRD36BQ8N2N9 1353 aa17.34■□□□□ 0.37
APOBEC3B-204ENST00000407298 ZCRB1Q8TBF4 217 aaKnown RBP17.34■□□□□ 0.37
APOBEC3B-204ENST00000407298 A0A1W2PP64 1363 aa17.33■□□□□ 0.36
APOBEC3B-204ENST00000407298 FAM208AQ9UK61 1670 aaKnown RBP17.32■□□□□ 0.36
APOBEC3B-204ENST00000407298 HOXC9P31274 260 aa17.31■□□□□ 0.36
APOBEC3B-204ENST00000407298 CCNL1Q9UK58 526 aaPredicted RBP17.31■□□□□ 0.36
APOBEC3B-204ENST00000407298 CGNL1Q0VF96 1302 aa17.3■□□□□ 0.36
APOBEC3B-204ENST00000407298 USP47Q96K76 1375 aa17.29■□□□□ 0.36
APOBEC3B-204ENST00000407298 GOLGB1Q14789 3259 aaKnown RBP17.29■□□□□ 0.36
APOBEC3B-204ENST00000407298 MAP3K19Q56UN5 1328 aa17.29■□□□□ 0.36
APOBEC3B-204ENST00000407298 KCNQ4P56696 695 aa17.29■□□□□ 0.36
APOBEC3B-204ENST00000407298 COL24A1Q17RW2 1714 aa17.28■□□□□ 0.36
APOBEC3B-204ENST00000407298 FLAD1Q8NFF5 587 aa17.28■□□□□ 0.36
APOBEC3B-204ENST00000407298 NLGN2Q8NFZ4 835 aa17.28■□□□□ 0.36
APOBEC3B-204ENST00000407298 RAPGEF4Q8WZA2 1011 aa17.27■□□□□ 0.36
APOBEC3B-204ENST00000407298 RTL1A6NKG5 1358 aa17.26■□□□□ 0.35
APOBEC3B-204ENST00000407298 NSD2O96028 1365 aa17.26■□□□□ 0.35
APOBEC3B-204ENST00000407298 COL23A1Q86Y22 540 aaPredicted RBP17.25■□□□□ 0.35
APOBEC3B-204ENST00000407298 TONSLQ96HA7 1378 aa17.25■□□□□ 0.35
APOBEC3B-204ENST00000407298 LY75O60449 1722 aa17.24■□□□□ 0.35
APOBEC3B-204ENST00000407298 SMG6Q86US8 1419 aaKnown RBP17.24■□□□□ 0.35
APOBEC3B-204ENST00000407298 TATP17735 454 aaPredicted RBP17.24■□□□□ 0.35
APOBEC3B-204ENST00000407298 CD2APQ9Y5K6 639 aa17.24■□□□□ 0.35
APOBEC3B-204ENST00000407298 DOT1LQ8TEK3 1739 aa17.24■□□□□ 0.35
APOBEC3B-204ENST00000407298 NBPF6Q5VWK0 638 aa17.23■□□□□ 0.35
APOBEC3B-204ENST00000407298 NBPF4Q96M43 638 aa17.23■□□□□ 0.35
APOBEC3B-204ENST00000407298 CEP350Q5VT06 3117 aa17.23■□□□□ 0.35
APOBEC3B-204ENST00000407298 ST20-MTHFSA0A0A6YYL1 179 aa17.22■□□□□ 0.35
APOBEC3B-204ENST00000407298 YBX3P16989 372 aaKnown RBP eCLIP17.22■□□□□ 0.352e-7■■■■□ 25.1
APOBEC3B-204ENST00000407298 MEGF6O75095 1541 aa17.21■□□□□ 0.35
APOBEC3B-204ENST00000407298 TUBGCP6Q96RT7 1819 aa17.21■□□□□ 0.35
APOBEC3B-204ENST00000407298 FBLN1P23142 703 aa17.21■□□□□ 0.35
APOBEC3B-204ENST00000407298 TRIM26Q12899 539 aaPredicted RBP17.21■□□□□ 0.35
APOBEC3B-204ENST00000407298 TESK2Q96S53 571 aa17.21■□□□□ 0.35
APOBEC3B-204ENST00000407298 PCDH11XQ9BZA7 1347 aa17.21■□□□□ 0.34
APOBEC3B-204ENST00000407298 PCDH11YQ9BZA8 1340 aa17.21■□□□□ 0.34
APOBEC3B-204ENST00000407298 RRS1Q15050 365 aaKnown RBP17.2■□□□□ 0.34
APOBEC3B-204ENST00000407298 MSL1Q68DK7 614 aa17.2■□□□□ 0.34
APOBEC3B-204ENST00000407298 SMARCC1Q92922 1105 aaPredicted RBP17.2■□□□□ 0.34
APOBEC3B-204ENST00000407298 IFFO2Q5TF58 517 aa17.19■□□□□ 0.34
APOBEC3B-204ENST00000407298 FYB1O15117 783 aa17.18■□□□□ 0.34
APOBEC3B-204ENST00000407298 USHBP1Q8N6Y0 703 aa17.18■□□□□ 0.34
APOBEC3B-204ENST00000407298 GPBP1L1Q9HC44 474 aaPredicted RBP17.18■□□□□ 0.34
APOBEC3B-204ENST00000407298 SHANK3Q9BYB0 1731 aa17.18■□□□□ 0.34
APOBEC3B-204ENST00000407298 PALLDQ8WX93 1383 aa17.17■□□□□ 0.34
APOBEC3B-204ENST00000407298 TMF1P82094 1093 aa17.17■□□□□ 0.34
APOBEC3B-204ENST00000407298 MPRIPQ6WCQ1 1025 aa17.17■□□□□ 0.34
APOBEC3B-204ENST00000407298 AK7Q96M32 723 aa17.17■□□□□ 0.34
APOBEC3B-204ENST00000407298 RGPD2P0DJD1 1756 aa17.17■□□□□ 0.34
APOBEC3B-204ENST00000407298 INSRP06213 1382 aa17.16■□□□□ 0.34
APOBEC3B-204ENST00000407298 KIF24Q5T7B8 1368 aa17.16■□□□□ 0.34
APOBEC3B-204ENST00000407298 NSD3Q9BZ95 1437 aa17.16■□□□□ 0.34
APOBEC3B-204ENST00000407298 CDCA8Q53HL2 280 aa17.16■□□□□ 0.34
APOBEC3B-204ENST00000407298 GGNBP2Q9H3C7 697 aa17.16■□□□□ 0.34
APOBEC3B-204ENST00000407298 ATP10DQ9P241 1426 aa17.15■□□□□ 0.34
APOBEC3B-204ENST00000407298 HSP90AB2PQ58FF8 381 aa17.14■□□□□ 0.33
APOBEC3B-204ENST00000407298 FLT4P35916 1363 aa17.14■□□□□ 0.33
APOBEC3B-204ENST00000407298 C5P01031 1676 aa17.13■□□□□ 0.33
APOBEC3B-204ENST00000407298 SPG7Q9UQ90 795 aa17.12■□□□□ 0.33
APOBEC3B-204ENST00000407298 CYP27B1O15528 508 aa17.11■□□□□ 0.33
APOBEC3B-204ENST00000407298 SSFA2P28290 1259 aa17.11■□□□□ 0.33
APOBEC3B-204ENST00000407298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.1■□□□□ 0.33
APOBEC3B-204ENST00000407298 HSPA6P17066 643 aa17.1■□□□□ 0.33
APOBEC3B-204ENST00000407298 NKX1-1Q15270 411 aaPredicted RBP17.1■□□□□ 0.33
APOBEC3B-204ENST00000407298 PIGBQ92521 554 aa17.1■□□□□ 0.33
APOBEC3B-204ENST00000407298 PHF14O94880 888 aa17.09■□□□□ 0.33
APOBEC3B-204ENST00000407298 IGSF1Q8N6C5 1336 aa17.09■□□□□ 0.33
APOBEC3B-204ENST00000407298 TAF1LQ8IZX4 1826 aa17.09■□□□□ 0.33
APOBEC3B-204ENST00000407298 C4BP0C0L5 1744 aa17.08■□□□□ 0.32
APOBEC3B-204ENST00000407298 ADCY9O60503 1353 aa17.08■□□□□ 0.32
APOBEC3B-204ENST00000407298 LOC102724428A0A0B4J2F2 783 aa17.08■□□□□ 0.32
APOBEC3B-204ENST00000407298 SIK1P57059 783 aa17.08■□□□□ 0.32
APOBEC3B-204ENST00000407298 ZNF526Q8TF50 670 aaPredicted RBP17.08■□□□□ 0.32
APOBEC3B-204ENST00000407298 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.08■□□□□ 0.32
APOBEC3B-204ENST00000407298 TMOD3Q9NYL9 352 aa17.07■□□□□ 0.32
APOBEC3B-204ENST00000407298 PPM1GO15355 546 aaPredicted RBP17.06■□□□□ 0.32
APOBEC3B-204ENST00000407298 GNPATO15228 680 aa17.04■□□□□ 0.32
APOBEC3B-204ENST00000407298 IFNL2Q8IZJ0 200 aa17.04■□□□□ 0.32
APOBEC3B-204ENST00000407298 LINC00116Q8NCU8 138 aa17.04■□□□□ 0.32
APOBEC3B-204ENST00000407298 EMILIN1Q9Y6C2 1016 aa17.04■□□□□ 0.32
APOBEC3B-204ENST00000407298 ITGB4P16144 1822 aa17.04■□□□□ 0.32
APOBEC3B-204ENST00000407298 WASHC2AQ641Q2 1341 aa17.03■□□□□ 0.32
APOBEC3B-204ENST00000407298 ATP6V1AP38606 617 aa17.03■□□□□ 0.32
APOBEC3B-204ENST00000407298 AMIGO3Q86WK7 504 aa17.03■□□□□ 0.32
APOBEC3B-204ENST00000407298 KIF20BQ96Q89 1820 aa17.03■□□□□ 0.32
APOBEC3B-204ENST00000407298 UBR3Q6ZT12 1888 aa17.02■□□□□ 0.32
APOBEC3B-204ENST00000407298 TGFB2P61812 414 aa17.02■□□□□ 0.32
APOBEC3B-204ENST00000407298 PKD1L3Q7Z443 1732 aa17.01■□□□□ 0.31
APOBEC3B-204ENST00000407298 MMP10P09238 476 aa17.01■□□□□ 0.31
APOBEC3B-204ENST00000407298 NLGN1Q8N2Q7 840 aa17.01■□□□□ 0.31
APOBEC3B-204ENST00000407298 WWC3Q9ULE0 1092 aa17.01■□□□□ 0.31
APOBEC3B-204ENST00000407298 ASAP1Q9ULH1 1129 aa17.01■□□□□ 0.31
APOBEC3B-204ENST00000407298 NCAPD2Q15021 1401 aa17.01■□□□□ 0.31
APOBEC3B-204ENST00000407298 TRAPPC3LQ5T215 181 aa17■□□□□ 0.31
APOBEC3B-204ENST00000407298 SMIM5Q71RC9 77 aa17■□□□□ 0.31
APOBEC3B-204ENST00000407298 EYA1Q99502 592 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms