RNA–Protein interactions for RNA: ENST00000407008.7

NLK-201, Transcript of nemo like kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLK, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-201ENST00000407008 MCM10Q7L590 875 aa10.3□□□□□ -0.76
NLK-201ENST00000407008 ORAI2Q96SN7 254 aa10.3□□□□□ -0.76
NLK-201ENST00000407008 USP32Q8NFA0 1604 aa10.3□□□□□ -0.76
NLK-201ENST00000407008 PAXIP1Q6ZW49 1069 aaPredicted RBP10.3□□□□□ -0.76
NLK-201ENST00000407008 ARHGAP45Q92619 1136 aa10.3□□□□□ -0.76
NLK-201ENST00000407008 THUMPD2Q9BTF0 503 aaKnown RBP10.3□□□□□ -0.76
NLK-201ENST00000407008 BABAM1Q9NWV8 329 aa10.3□□□□□ -0.76
NLK-201ENST00000407008 RNF123Q5XPI4 1314 aa10.3□□□□□ -0.76
NLK-201ENST00000407008 EYA1Q99502 592 aa10.3□□□□□ -0.76
NLK-201ENST00000407008 C3P01024 1663 aa10.29□□□□□ -0.76
NLK-201ENST00000407008 SLC4A2P04920 1241 aa10.29□□□□□ -0.76
NLK-201ENST00000407008 GPATCH3Q96I76 525 aa10.29□□□□□ -0.76
NLK-201ENST00000407008 STRN4Q9NRL3 753 aa10.29□□□□□ -0.76
NLK-201ENST00000407008 PTPRCP08575 1304 aa10.29□□□□□ -0.76
NLK-201ENST00000407008 USP31Q70CQ4 1352 aa10.29□□□□□ -0.76
NLK-201ENST00000407008 BTBD11A6QL63 1104 aa10.29□□□□□ -0.76
NLK-201ENST00000407008 DHX37Q8IY37 1157 aaKnown RBP10.29□□□□□ -0.76
NLK-201ENST00000407008 CABP4P57796 275 aa10.28□□□□□ -0.76
NLK-201ENST00000407008 HSP90AB4PQ58FF6 505 aa10.28□□□□□ -0.76
NLK-201ENST00000407008 MBIPQ9NS73 344 aa10.28□□□□□ -0.76
NLK-201ENST00000407008 AEBP1Q8IUX7 1158 aa10.28□□□□□ -0.76
NLK-201ENST00000407008 GCC1Q96CN9 775 aa10.28□□□□□ -0.76
NLK-201ENST00000407008 C9orf78Q9NZ63 289 aaPredicted RBP10.28□□□□□ -0.76
NLK-201ENST00000407008 TOM1O60784 492 aa10.28□□□□□ -0.76
NLK-201ENST00000407008 DCTN1Q14203 1278 aa10.28□□□□□ -0.76
NLK-201ENST00000407008 AKAP4Q5JQC9 854 aa10.28□□□□□ -0.76
NLK-201ENST00000407008 ZNF521Q96K83 1311 aa10.28□□□□□ -0.76
NLK-201ENST00000407008 MAP3K5Q99683 1374 aa10.27□□□□□ -0.76
NLK-201ENST00000407008 IFNL2Q8IZJ0 200 aa10.27□□□□□ -0.77
NLK-201ENST00000407008 ANKRD45Q5TZF3 282 aa10.27□□□□□ -0.77
NLK-201ENST00000407008 USHBP1Q8N6Y0 703 aa10.27□□□□□ -0.77
NLK-201ENST00000407008 PHACTR3Q96KR7 559 aa10.27□□□□□ -0.77
NLK-201ENST00000407008 PNPLA6Q8IY17 1366 aa10.27□□□□□ -0.77
NLK-201ENST00000407008 MCCP23508 829 aa10.26□□□□□ -0.77
NLK-201ENST00000407008 PDE4AP27815 886 aa10.26□□□□□ -0.77
NLK-201ENST00000407008 UBTFL1P0CB47 393 aaPredicted RBP10.26□□□□□ -0.77
NLK-201ENST00000407008 NECTIN2Q92692 538 aa10.26□□□□□ -0.77
NLK-201ENST00000407008 LRRC59Q96AG4 307 aaKnown RBP10.26□□□□□ -0.77
NLK-201ENST00000407008 SLAIN2Q9P270 581 aa10.26□□□□□ -0.77
NLK-201ENST00000407008 ITSN1Q15811 1721 aa10.26□□□□□ -0.77
NLK-201ENST00000407008 PTPRUQ92729 1446 aa10.25□□□□□ -0.77
NLK-201ENST00000407008 NCOA3Q9Y6Q9 1424 aa10.25□□□□□ -0.77
NLK-201ENST00000407008 MTHFSDQ2M296 383 aaKnown RBP10.25□□□□□ -0.77
NLK-201ENST00000407008 TRIM35Q9UPQ4 493 aa10.25□□□□□ -0.77
NLK-201ENST00000407008 PLEKHF1Q96S99 279 aa10.25□□□□□ -0.77
NLK-201ENST00000407008 ZNF330Q9Y3S2 320 aaPredicted RBP10.25□□□□□ -0.77
NLK-201ENST00000407008 RIC3Q7Z5B4 369 aa10.25□□□□□ -0.77
NLK-201ENST00000407008 RPAP2Q8IXW5 612 aaPredicted RBP10.25□□□□□ -0.77
NLK-201ENST00000407008 GNAI2P04899 355 aa10.24□□□□□ -0.77
NLK-201ENST00000407008 TRMT2AQ8IZ69 625 aaKnown RBP10.24□□□□□ -0.77
NLK-201ENST00000407008 TMEM57Q8N5G2 664 aa10.24□□□□□ -0.77
NLK-201ENST00000407008 APBB1O00213 710 aa10.24□□□□□ -0.77
NLK-201ENST00000407008 TRIM27P14373 513 aa10.24□□□□□ -0.77
NLK-201ENST00000407008 FAM83GA6ND36 823 aa10.24□□□□□ -0.77
NLK-201ENST00000407008 MEX3CQ5U5Q3 659 aaKnown RBP10.24□□□□□ -0.77
NLK-201ENST00000407008 SRCIN1Q9C0H9 1055 aa10.24□□□□□ -0.77
NLK-201ENST00000407008 KNDC1Q76NI1 1749 aa10.24□□□□□ -0.77
NLK-201ENST00000407008 IGSF1Q8N6C5 1336 aa10.24□□□□□ -0.77
NLK-201ENST00000407008 TULP1O00294 542 aaPredicted RBP10.23□□□□□ -0.77
NLK-201ENST00000407008 MYOM1P52179 1685 aa10.23□□□□□ -0.77
NLK-201ENST00000407008 C20orf194Q5TEA3 1177 aa10.23□□□□□ -0.77
NLK-201ENST00000407008 NOP58Q9Y2X3 529 aaKnown RBP10.23□□□□□ -0.77
NLK-201ENST00000407008 LMTK3Q96Q04 1460 aa10.22□□□□□ -0.77
NLK-201ENST00000407008 NPHP1O15259 732 aa10.22□□□□□ -0.77
NLK-201ENST00000407008 USP35Q9P2H5 1018 aa10.22□□□□□ -0.77
NLK-201ENST00000407008 DBF4Q9UBU7 674 aaPredicted RBP10.22□□□□□ -0.77
NLK-201ENST00000407008 OVOS2A0A0J9YW53 1432 aa10.22□□□□□ -0.77
NLK-201ENST00000407008 OVOS2Q6IE36 1432 aa10.22□□□□□ -0.77
NLK-201ENST00000407008 VAMP4O75379 141 aa10.22□□□□□ -0.77
NLK-201ENST00000407008 HOXB7P09629 217 aa10.22□□□□□ -0.77
NLK-201ENST00000407008 MPRIPQ6WCQ1 1025 aa10.22□□□□□ -0.77
NLK-201ENST00000407008 SPINK5Q9NQ38 1064 aaPredicted RBP10.22□□□□□ -0.77
NLK-201ENST00000407008 KIAA0232Q92628 1395 aa10.22□□□□□ -0.77
NLK-201ENST00000407008 CHL1O00533 1208 aa10.22□□□□□ -0.77
NLK-201ENST00000407008 CHRNA2Q15822 529 aa10.22□□□□□ -0.77
NLK-201ENST00000407008 ARHGEF25Q86VW2 580 aa10.22□□□□□ -0.77
NLK-201ENST00000407008 HSCBQ8IWL3 235 aa10.21□□□□□ -0.77
NLK-201ENST00000407008 DDX54Q8TDD1 881 aaKnown RBP10.21□□□□□ -0.77
NLK-201ENST00000407008 DCCP43146 1447 aa10.21□□□□□ -0.77
NLK-201ENST00000407008 HMGB2P26583 209 aaKnown RBP10.21□□□□□ -0.78
NLK-201ENST00000407008 SYTL4Q96C24 671 aaPredicted RBP10.21□□□□□ -0.78
NLK-201ENST00000407008 FMNL2Q96PY5 1086 aa10.21□□□□□ -0.78
NLK-201ENST00000407008 HYPKQ9NX55 129 aa10.21□□□□□ -0.78
NLK-201ENST00000407008 KIAA1211Q6ZU35 1233 aa10.21□□□□□ -0.78
NLK-201ENST00000407008 MIS18AQ9NYP9 233 aa10.21□□□□□ -0.78
NLK-201ENST00000407008 PDZRN3Q9UPQ7 1066 aa10.21□□□□□ -0.78
NLK-201ENST00000407008 KIF20BQ96Q89 1820 aa10.2□□□□□ -0.78
NLK-201ENST00000407008 ADGRB2O60241 1585 aa10.2□□□□□ -0.78
NLK-201ENST00000407008 MRPL50Q8N5N7 158 aaKnown RBP10.2□□□□□ -0.78
NLK-201ENST00000407008 HSP90B1P14625 803 aaKnown RBP10.2□□□□□ -0.78
NLK-201ENST00000407008 PIP4K2BP78356 416 aa10.2□□□□□ -0.78
NLK-201ENST00000407008 CHMP3Q9Y3E7 222 aa10.2□□□□□ -0.78
NLK-201ENST00000407008 ZCRB1Q8TBF4 217 aaKnown RBP10.2□□□□□ -0.78
NLK-201ENST00000407008 C1orf167Q5SNV9 1468 aa10.19□□□□□ -0.78
NLK-201ENST00000407008 FLIIQ13045 1269 aa10.19□□□□□ -0.78
NLK-201ENST00000407008 DCAF5Q96JK2 942 aa10.19□□□□□ -0.78
NLK-201ENST00000407008 PHF23Q9BUL5 403 aaPredicted RBP10.19□□□□□ -0.78
NLK-201ENST00000407008 LNPKQ9C0E8 428 aa10.19□□□□□ -0.78
NLK-201ENST00000407008 AIMP1Q12904 312 aaKnown RBP10.19□□□□□ -0.78
NLK-201ENST00000407008 G3BP1Q13283 466 aaKnown RBP eCLIP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms