RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 IFNL2Q8IZJ0 200 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 PLEKHG1Q9ULL1 1385 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 NLRP1Q9C000 1473 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 SRGAP3O43295 1099 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 MSNP26038 577 aaKnown RBP5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 TRDNQ13061 729 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 MEX3CQ5U5Q3 659 aaKnown RBP5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 ANKRD24Q8TF21 1146 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 KIF1BPQ96EK5 621 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 FSD1Q9BTV5 496 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 RSPH6AQ9H0K4 717 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 GZF1Q9H116 711 aaPredicted RBP5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 DDX49Q9Y6V7 483 aaKnown RBP5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 H3BQV1 296 aa5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 CDK11BP21127 795 aaKnown RBP5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 FLIIQ13045 1269 aa5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 DNTTIP2Q5QJE6 756 aaKnown RBP5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 IFFO2Q5TF58 517 aa5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 DNAAF4Q8WXU2 420 aa5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 NEUROD6Q96NK8 337 aa5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 CIZ1Q9ULV3 898 aaPredicted RBP5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 SBNO1A3KN83 1393 aa5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 TPM4P67936 248 aa5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 DDX54Q8TDD1 881 aaKnown RBP5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 RBM42Q9BTD8 480 aaKnown RBP5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 CWC22Q9HCG8 908 aaKnown RBP5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 SMC3Q9UQE7 1217 aa5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 LRRIQ1Q96JM4 1722 aa5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 STARD3NLO95772 234 aa5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 IL13P35225 146 aa5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 AKAP4Q5JQC9 854 aa5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 MRPL50Q8N5N7 158 aaKnown RBP5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 FMNL2Q96PY5 1086 aa5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 NOL10Q9BSC4 688 aaKnown RBP5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 TEX13AQ9BXU3 409 aaPredicted RBP5.73□□□□□ -1.49
PCDH11X-207ENST00000406881 FAM135BQ49AJ0 1406 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 ATP7BP35670 1465 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 G3V3G9 751 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 DCAF8Q5TAQ9 597 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 IP6K1Q92551 441 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 TOMM22Q9NS69 142 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 MIS18AQ9NYP9 233 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 MAP3K19Q56UN5 1328 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 DCAF8L1A6NGE4 600 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 PDIA4P13667 645 aaKnown RBP5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 AMOTL1Q8IY63 956 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 USHBP1Q8N6Y0 703 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 TBC1D2BQ9UPU7 963 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 MAP3K4Q9Y6R4 1608 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 VAMP4O75379 141 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 GLRX3O76003 335 aaKnown RBP5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 KIAA2012Q0VF49 1180 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 SF3A1Q15459 793 aaKnown RBP5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 NFKBIBQ15653 356 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 BMP2KLQ5H9B9 411 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 CCDC158Q5M9N0 1113 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 ZRANB1Q9UGI0 708 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 UGGT1Q9NYU2 1555 aa5.72□□□□□ -1.49
PCDH11X-207ENST00000406881 TRPM1Q7Z4N2 1603 aa5.71□□□□□ -1.49
PCDH11X-207ENST00000406881 AATKQ6ZMQ8 1374 aa5.71□□□□□ -1.49
PCDH11X-207ENST00000406881 PDCP20941 246 aa5.71□□□□□ -1.49
PCDH11X-207ENST00000406881 MPRIPQ6WCQ1 1025 aa5.71□□□□□ -1.49
PCDH11X-207ENST00000406881 VPS37DQ86XT2 251 aa5.71□□□□□ -1.49
PCDH11X-207ENST00000406881 TAOK2Q9UL54 1235 aa5.71□□□□□ -1.49
PCDH11X-207ENST00000406881 RNF17Q9BXT8 1623 aaKnown RBP5.71□□□□□ -1.49
PCDH11X-207ENST00000406881 FAM83GA6ND36 823 aa5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 MYL6BP14649 208 aa5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 AKAP17AQ02040 695 aaKnown RBP5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 CHAF1AQ13111 956 aaPredicted RBP5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 ANKRD1Q15327 319 aa5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 HSP90AB3PQ58FF7 597 aa5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 RALYLQ86SE5 291 aaKnown RBP5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 TMOD3Q9NYL9 352 aa5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 CLTCL1P53675 1640 aa5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 MAP3K5Q99683 1374 aa5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 K7ELQ4 463 aaPredicted RBP5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 CPLX1O14810 134 aa5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 MX1P20591 662 aa5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 HOXC9P31274 260 aa5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 NEK4P51957 841 aa5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 CCDC57Q2TAC2 916 aa5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 CEP126Q9P2H0 1117 aa5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 SPHKAPQ2M3C7 1700 aa5.71□□□□□ -1.5
PCDH11X-207ENST00000406881 ALDH1L1O75891 902 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 APPP05067 770 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 FBLN1P23142 703 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 MTHFSDQ2M296 383 aaKnown RBP5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 ZSCAN25Q6NSZ9 544 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 AEBP1Q8IUX7 1158 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 DRC7Q8IY82 874 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 EYA1Q99502 592 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 GCP02774 474 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 SNRPA1P09661 255 aaKnown RBP5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 LTKP29376 864 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 TRIM29Q14134 588 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 WASHC4Q2M389 1173 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 AACSQ86V21 672 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 ANKRD44Q8N8A2 993 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms