RNA–Protein interactions for RNA: ENST00000406525.6

LARP4B-202, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 5

Gene LARP4B, Length 681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-202ENST00000406525 KCNQ2O43526 872 aa36.93■■■■□ 3.5
LARP4B-202ENST00000406525 TATP17735 454 aaPredicted RBP36.93■■■■□ 3.5
LARP4B-202ENST00000406525 MAP2P11137 1827 aaKnown RBP36.92■■■■□ 3.5
LARP4B-202ENST00000406525 R3HDM1Q15032 1099 aaKnown RBP36.92■■■■□ 3.5
LARP4B-202ENST00000406525 ACSBG1Q96GR2 724 aa36.91■■■■□ 3.5
LARP4B-202ENST00000406525 NCAPD2Q15021 1401 aa36.91■■■■□ 3.5
LARP4B-202ENST00000406525 NHSQ6T4R5 1651 aa36.9■■■■□ 3.5
LARP4B-202ENST00000406525 AMER1Q5JTC6 1135 aaPredicted RBP36.9■■■■□ 3.5
LARP4B-202ENST00000406525 NUP188Q5SRE5 1749 aa36.88■■■■□ 3.49
LARP4B-202ENST00000406525 PER1O15534 1290 aaPredicted RBP36.87■■■■□ 3.49
LARP4B-202ENST00000406525 LRP5O75197 1615 aa36.86■■■■□ 3.49
LARP4B-202ENST00000406525 PROM2Q8N271 834 aa36.86■■■■□ 3.49
LARP4B-202ENST00000406525 EYA1Q99502 592 aa36.85■■■■□ 3.49
LARP4B-202ENST00000406525 PCDH11XQ9BZA7 1347 aa36.84■■■■□ 3.49
LARP4B-202ENST00000406525 PCDH11YQ9BZA8 1340 aa36.84■■■■□ 3.49
LARP4B-202ENST00000406525 EIF4A2Q14240 407 aaKnown RBP36.83■■■■□ 3.49
LARP4B-202ENST00000406525 TXNRD1Q16881 649 aa36.83■■■■□ 3.49
LARP4B-202ENST00000406525 PLEKHG2Q9H7P9 1386 aa36.79■■■■□ 3.48
LARP4B-202ENST00000406525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP36.79■■■■□ 3.488e-7■□□□□ 10.6
LARP4B-202ENST00000406525 SHANK3Q9BYB0 1731 aa36.79■■■■□ 3.48
LARP4B-202ENST00000406525 PRIM1P49642 420 aaKnown RBP36.77■■■■□ 3.48
LARP4B-202ENST00000406525 SPG7Q9UQ90 795 aa36.77■■■■□ 3.48
LARP4B-202ENST00000406525 NPC1L1Q9UHC9 1359 aa36.77■■■■□ 3.48
LARP4B-202ENST00000406525 IGSF1Q8N6C5 1336 aa36.74■■■■□ 3.47
LARP4B-202ENST00000406525 SYTL4Q96C24 671 aaPredicted RBP36.73■■■■□ 3.47
LARP4B-202ENST00000406525 BTAF1O14981 1849 aa36.72■■■■□ 3.47
LARP4B-202ENST00000406525 CYP27B1O15528 508 aa36.72■■■■□ 3.47
LARP4B-202ENST00000406525 ANO8Q9HCE9 1232 aaPredicted RBP36.7■■■■□ 3.47
LARP4B-202ENST00000406525 SLC27A3Q5K4L6 730 aa36.69■■■■□ 3.46
LARP4B-202ENST00000406525 PKD1L3Q7Z443 1732 aa36.68■■■■□ 3.46
LARP4B-202ENST00000406525 NKX1-1Q15270 411 aaPredicted RBP36.68■■■■□ 3.46
LARP4B-202ENST00000406525 STK32BQ9NY57 414 aa36.68■■■■□ 3.46
LARP4B-202ENST00000406525 KAT6BQ8WYB5 2073 aa36.66■■■■□ 3.46
LARP4B-202ENST00000406525 DOT1LQ8TEK3 1739 aa36.66■■■■□ 3.46
LARP4B-202ENST00000406525 CC2D1BQ5T0F9 858 aaKnown RBP36.66■■■■□ 3.46
LARP4B-202ENST00000406525 SLC15A2Q16348 729 aa36.65■■■■□ 3.46
LARP4B-202ENST00000406525 MTHFSP49914 203 aa36.63■■■■□ 3.45
LARP4B-202ENST00000406525 IL13P35225 146 aa36.62■■■■□ 3.45
LARP4B-202ENST00000406525 IFNL2Q8IZJ0 200 aa36.61■■■■□ 3.45
LARP4B-202ENST00000406525 LRRC4BQ9NT99 713 aa36.61■■■■□ 3.45
LARP4B-202ENST00000406525 HMGB2P26583 209 aaKnown RBP36.58■■■■□ 3.45
LARP4B-202ENST00000406525 AMOTQ4VCS5 1084 aa36.58■■■■□ 3.45
LARP4B-202ENST00000406525 PHKG2P15735 406 aa36.57■■■■□ 3.44
LARP4B-202ENST00000406525 SPON1Q9HCB6 807 aa36.57■■■■□ 3.44
LARP4B-202ENST00000406525 PLEKHO1Q53GL0 409 aaPredicted RBP36.56■■■■□ 3.44
LARP4B-202ENST00000406525 KDRP35968 1356 aa36.55■■■■□ 3.44
LARP4B-202ENST00000406525 PAPPAQ13219 1627 aa36.55■■■■□ 3.44
LARP4B-202ENST00000406525 MPRIPQ6WCQ1 1025 aa36.54■■■■□ 3.44
LARP4B-202ENST00000406525 SULT6B1Q6IMI4 303 aa36.53■■■■□ 3.44
LARP4B-202ENST00000406525 HSP90AB1P08238 724 aaKnown RBP36.52■■■■□ 3.44
LARP4B-202ENST00000406525 SMARCC1Q92922 1105 aaPredicted RBP36.52■■■■□ 3.44
LARP4B-202ENST00000406525 AEBP1Q8IUX7 1158 aa36.5■■■■□ 3.43
LARP4B-202ENST00000406525 AKT1S1Q96B36 256 aa36.5■■■■□ 3.43
LARP4B-202ENST00000406525 CCNL1Q9UK58 526 aaPredicted RBP36.5■■■■□ 3.43
LARP4B-202ENST00000406525 LY75O60449 1722 aa36.5■■■■□ 3.43
LARP4B-202ENST00000406525 DIAPH1O60610 1272 aaKnown RBP36.49■■■■□ 3.43
LARP4B-202ENST00000406525 CASZ1Q86V15 1759 aa36.48■■■■□ 3.43
LARP4B-202ENST00000406525 PIGBQ92521 554 aa36.48■■■■□ 3.43
LARP4B-202ENST00000406525 ZNF827Q17R98 1081 aa36.47■■■■□ 3.43
LARP4B-202ENST00000406525 DCAF5Q96JK2 942 aa36.47■■■■□ 3.43
LARP4B-202ENST00000406525 PALLDQ8WX93 1383 aa36.46■■■■□ 3.43
LARP4B-202ENST00000406525 TMOD3Q9NYL9 352 aa36.46■■■■□ 3.43
LARP4B-202ENST00000406525 TOGARAM1Q9Y4F4 1720 aa36.45■■■■□ 3.43
LARP4B-202ENST00000406525 ZNF530Q6P9A1 599 aaPredicted RBP36.45■■■■□ 3.43
LARP4B-202ENST00000406525 PDGFDQ9GZP0 370 aaPredicted RBP36.45■■■■□ 3.43
LARP4B-202ENST00000406525 ERVV-2B6SEH9 535 aa36.44■■■■□ 3.42
LARP4B-202ENST00000406525 KCNQ4P56696 695 aa36.42■■■■□ 3.42
LARP4B-202ENST00000406525 CNGB1Q14028 1251 aaPredicted RBP36.42■■■■□ 3.42
LARP4B-202ENST00000406525 C1orf141Q5JVX7 400 aa36.42■■■■□ 3.42
LARP4B-202ENST00000406525 MTFR1LQ9H019 292 aa36.41■■■■□ 3.42
LARP4B-202ENST00000406525 ITGB4P16144 1822 aa36.41■■■■□ 3.42
LARP4B-202ENST00000406525 TFCP2L1Q9NZI6 479 aa36.4■■■■□ 3.42
LARP4B-202ENST00000406525 ZBTB7AO95365 584 aa36.39■■■■□ 3.42
LARP4B-202ENST00000406525 SLC16A10Q8TF71 515 aa36.38■■■■□ 3.41
LARP4B-202ENST00000406525 PPP1R1BQ9UD71 204 aaPredicted RBP36.38■■■■□ 3.41
LARP4B-202ENST00000406525 CFAP53Q96M91 514 aa36.36■■■■□ 3.41
LARP4B-202ENST00000406525 COL3A1P02461 1466 aaPredicted RBP36.36■■■■□ 3.41
LARP4B-202ENST00000406525 HMOX1P09601 288 aa36.34■■■■□ 3.41
LARP4B-202ENST00000406525 PTGER2P43116 358 aa36.33■■■■□ 3.41
LARP4B-202ENST00000406525 AKAP4Q5JQC9 854 aa36.33■■■■□ 3.41
LARP4B-202ENST00000406525 ASAP1Q9ULH1 1129 aa36.33■■■■□ 3.41
LARP4B-202ENST00000406525 PNPLA7Q6ZV29 1317 aa36.33■■■■□ 3.41
LARP4B-202ENST00000406525 QSER1Q2KHR3 1735 aa36.32■■■■□ 3.4
LARP4B-202ENST00000406525 ATF5Q9Y2D1 282 aaPredicted RBP36.32■■■■□ 3.4
LARP4B-202ENST00000406525 KDM6AO15550 1401 aaPredicted RBP36.32■■■■□ 3.4
LARP4B-202ENST00000406525 LOC102724428A0A0B4J2F2 783 aa36.31■■■■□ 3.4
LARP4B-202ENST00000406525 SIK1P57059 783 aa36.31■■■■□ 3.4
LARP4B-202ENST00000406525 PPP2R1AP30153 589 aa36.3■■■■□ 3.4
LARP4B-202ENST00000406525 CABP4P57796 275 aa36.3■■■■□ 3.4
LARP4B-202ENST00000406525 ATG3Q9NT62 314 aa36.3■■■■□ 3.4
LARP4B-202ENST00000406525 SGIP1Q9BQI5 828 aa36.28■■■■□ 3.4
LARP4B-202ENST00000406525 U2SURPO15042 1029 aaKnown RBP36.27■■■■□ 3.4
LARP4B-202ENST00000406525 FLAD1Q8NFF5 587 aa36.27■■■■□ 3.4
LARP4B-202ENST00000406525 C5P01031 1676 aa36.26■■■■□ 3.39
LARP4B-202ENST00000406525 NUDCQ9Y266 331 aa36.25■■■■□ 3.39
LARP4B-202ENST00000406525 MTHFSDQ2M296 383 aaKnown RBP36.22■■■■□ 3.39
LARP4B-202ENST00000406525 ATP6V1AP38606 617 aa36.21■■■■□ 3.39
LARP4B-202ENST00000406525 NFATC2IPQ8NCF5 419 aa36.21■■■■□ 3.39
LARP4B-202ENST00000406525 AK7Q96M32 723 aa36.21■■■■□ 3.39
LARP4B-202ENST00000406525 TAF1LQ8IZX4 1826 aa36.2■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms