RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 CPSF1Q10570 1443 aaKnown RBP21.07■□□□□ 0.96
SNRNP70-202ENST00000401730 FOXD4L6Q3SYB3 417 aaPredicted RBP21.07■□□□□ 0.96
SNRNP70-202ENST00000401730 FOXD4L3Q6VB84 417 aaPredicted RBP21.07■□□□□ 0.96
SNRNP70-202ENST00000401730 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.07■□□□□ 0.96
SNRNP70-202ENST00000401730 DDX11L8A8MPP1 907 aa21.06■□□□□ 0.96
SNRNP70-202ENST00000401730 BRPF1P55201 1214 aaPredicted RBP21.06■□□□□ 0.96
SNRNP70-202ENST00000401730 TTC22Q5TAA0 569 aa21.06■□□□□ 0.96
SNRNP70-202ENST00000401730 USHBP1Q8N6Y0 703 aa21.06■□□□□ 0.96
SNRNP70-202ENST00000401730 SNX21Q969T3 373 aa21.05■□□□□ 0.96
SNRNP70-202ENST00000401730 MAP3K19Q56UN5 1328 aa21.05■□□□□ 0.96
SNRNP70-202ENST00000401730 ATP7BP35670 1465 aa21.05■□□□□ 0.96
SNRNP70-202ENST00000401730 PTCH1Q13635 1447 aa21.05■□□□□ 0.96
SNRNP70-202ENST00000401730 GBP4Q96PP9 640 aa21.05■□□□□ 0.96
SNRNP70-202ENST00000401730 CLTCQ00610 1675 aaKnown RBP21.05■□□□□ 0.96
SNRNP70-202ENST00000401730 CHL1O00533 1208 aa21.04■□□□□ 0.96
SNRNP70-202ENST00000401730 GRPEL1Q9HAV7 217 aa21.04■□□□□ 0.96
SNRNP70-202ENST00000401730 MCTP1Q6DN14 999 aa21.04■□□□□ 0.96
SNRNP70-202ENST00000401730 ANKRD44Q8N8A2 993 aa21.04■□□□□ 0.96
SNRNP70-202ENST00000401730 ZGPATQ8N5A5 531 aaKnown RBP21.03■□□□□ 0.96
SNRNP70-202ENST00000401730 KIF20BQ96Q89 1820 aa21.03■□□□□ 0.96
SNRNP70-202ENST00000401730 FSD2A1L4K1 749 aa21.02■□□□□ 0.96
SNRNP70-202ENST00000401730 FKBP5Q13451 457 aaPredicted RBP21.02■□□□□ 0.96
SNRNP70-202ENST00000401730 RAB3GAP1Q15042 981 aa21.02■□□□□ 0.96
SNRNP70-202ENST00000401730 INTS3Q68E01 1043 aaKnown RBP21.02■□□□□ 0.95
SNRNP70-202ENST00000401730 RILPL2Q969X0 211 aa21.02■□□□□ 0.95
SNRNP70-202ENST00000401730 PKNOX2Q96KN3 472 aa21.02■□□□□ 0.95
SNRNP70-202ENST00000401730 DDX49Q9Y6V7 483 aaKnown RBP21.02■□□□□ 0.95
SNRNP70-202ENST00000401730 NLRP6P59044 892 aa21.01■□□□□ 0.95
SNRNP70-202ENST00000401730 DTNBO60941 627 aa21.01■□□□□ 0.95
SNRNP70-202ENST00000401730 DDIT3P35638 169 aa21.01■□□□□ 0.95
SNRNP70-202ENST00000401730 AK9Q5TCS8 1911 aa21.01■□□□□ 0.95
SNRNP70-202ENST00000401730 HDGFP51858 240 aaKnown RBP21■□□□□ 0.95
SNRNP70-202ENST00000401730 GLIPR1L2Q4G1C9 344 aa21■□□□□ 0.95
SNRNP70-202ENST00000401730 TRIM6-TRIM34B2RNG4 842 aa21■□□□□ 0.95
SNRNP70-202ENST00000401730 MAP4K4O95819 1239 aaPredicted RBP21■□□□□ 0.95
SNRNP70-202ENST00000401730 EYA1Q99502 592 aa21■□□□□ 0.95
SNRNP70-202ENST00000401730 USP26Q9BXU7 913 aa21■□□□□ 0.95
SNRNP70-202ENST00000401730 AMOTL2Q9Y2J4 779 aa21■□□□□ 0.95
SNRNP70-202ENST00000401730 CDK12Q9NYV4 1490 aaPredicted RBP20.99■□□□□ 0.95
SNRNP70-202ENST00000401730 ANKRD26Q9UPS8 1709 aa20.99■□□□□ 0.95
SNRNP70-202ENST00000401730 PIK3R4Q99570 1358 aa20.99■□□□□ 0.95
SNRNP70-202ENST00000401730 IL1RAPL2Q9NP60 686 aa20.98■□□□□ 0.95
SNRNP70-202ENST00000401730 EIF2S2P20042 333 aaKnown RBP20.98■□□□□ 0.95
SNRNP70-202ENST00000401730 HSP90AA2PQ14568 343 aaPredicted RBP20.98■□□□□ 0.95
SNRNP70-202ENST00000401730 RTL1A6NKG5 1358 aa20.98■□□□□ 0.95
SNRNP70-202ENST00000401730 AATKQ6ZMQ8 1374 aa20.98■□□□□ 0.95
SNRNP70-202ENST00000401730 MRE11P49959 708 aa20.98■□□□□ 0.95
SNRNP70-202ENST00000401730 RPAP2Q8IXW5 612 aaPredicted RBP20.97■□□□□ 0.95
SNRNP70-202ENST00000401730 STK31Q9BXU1 1019 aa20.96■□□□□ 0.95
SNRNP70-202ENST00000401730 PNMA6EA0A0J9YXQ4 647 aa20.96■□□□□ 0.95
SNRNP70-202ENST00000401730 BAG4O95429 457 aaKnown RBP20.96■□□□□ 0.95
SNRNP70-202ENST00000401730 ANXA1P04083 346 aa20.95■□□□□ 0.94
SNRNP70-202ENST00000401730 CAVIN1Q6NZI2 390 aaKnown RBP20.95■□□□□ 0.94
SNRNP70-202ENST00000401730 TNRQ92752 1358 aa20.95■□□□□ 0.94
SNRNP70-202ENST00000401730 CASC1Q6TDU7 716 aa20.95■□□□□ 0.94
SNRNP70-202ENST00000401730 DLG5Q8TDM6 1919 aa20.94■□□□□ 0.94
SNRNP70-202ENST00000401730 NEK4P51957 841 aa20.94■□□□□ 0.94
SNRNP70-202ENST00000401730 LARP6Q9BRS8 491 aaKnown RBP20.93■□□□□ 0.94
SNRNP70-202ENST00000401730 GOLGA6L22H0YM25 854 aa20.93■□□□□ 0.94
SNRNP70-202ENST00000401730 RABEP1Q15276 862 aa20.93■□□□□ 0.94
SNRNP70-202ENST00000401730 TRIM44Q96DX7 344 aaPredicted RBP20.93■□□□□ 0.94
SNRNP70-202ENST00000401730 RBM27Q9P2N5 1060 aaKnown RBP20.93■□□□□ 0.94
SNRNP70-202ENST00000401730 PRPF40AO75400 957 aaKnown RBP20.93■□□□□ 0.94
SNRNP70-202ENST00000401730 ATP10DQ9P241 1426 aa20.92■□□□□ 0.94
SNRNP70-202ENST00000401730 ANO2Q9NQ90 1003 aa20.92■□□□□ 0.94
SNRNP70-202ENST00000401730 PDE1AP54750 535 aa20.92■□□□□ 0.94
SNRNP70-202ENST00000401730 UPF3BQ9BZI7 483 aaKnown RBP20.92■□□□□ 0.94
SNRNP70-202ENST00000401730 CIZ1Q9ULV3 898 aaPredicted RBP20.92■□□□□ 0.94
SNRNP70-202ENST00000401730 LRRFIP2Q9Y608 721 aaKnown RBP20.92■□□□□ 0.94
SNRNP70-202ENST00000401730 FLIIQ13045 1269 aa20.91■□□□□ 0.94
SNRNP70-202ENST00000401730 NUTM1Q86Y26 1132 aa20.91■□□□□ 0.94
SNRNP70-202ENST00000401730 RGS12O14924 1447 aa20.91■□□□□ 0.94
SNRNP70-202ENST00000401730 NCOA3Q9Y6Q9 1424 aa20.91■□□□□ 0.94
SNRNP70-202ENST00000401730 TMEM2Q9UHN6 1383 aa20.91■□□□□ 0.94
SNRNP70-202ENST00000401730 HMMRO75330 724 aa20.91■□□□□ 0.94
SNRNP70-202ENST00000401730 PHAXQ9H814 394 aaKnown RBP20.91■□□□□ 0.94
SNRNP70-202ENST00000401730 ERBB4Q15303 1308 aa20.91■□□□□ 0.94
SNRNP70-202ENST00000401730 ZMYND15Q9H091 742 aa20.91■□□□□ 0.94
SNRNP70-202ENST00000401730 GNAI2P04899 355 aa20.9■□□□□ 0.94
SNRNP70-202ENST00000401730 ABTB2Q8N961 1025 aa20.9■□□□□ 0.94
SNRNP70-202ENST00000401730 KNDC1Q76NI1 1749 aa20.9■□□□□ 0.94
SNRNP70-202ENST00000401730 PPP6R1Q9UPN7 881 aa20.9■□□□□ 0.94
SNRNP70-202ENST00000401730 CDC42BPGQ6DT37 1551 aa20.9■□□□□ 0.94
SNRNP70-202ENST00000401730 UNC5CLQ8IV45 518 aa20.89■□□□□ 0.94
SNRNP70-202ENST00000401730 EID1Q9Y6B2 187 aa20.89■□□□□ 0.94
SNRNP70-202ENST00000401730 PALD1Q9ULE6 856 aa20.89■□□□□ 0.93
SNRNP70-202ENST00000401730 DLC1Q96QB1 1528 aa20.89■□□□□ 0.93
SNRNP70-202ENST00000401730 LMOD2Q6P5Q4 547 aa20.89■□□□□ 0.93
SNRNP70-202ENST00000401730 PTPRCP08575 1304 aa20.88■□□□□ 0.93
SNRNP70-202ENST00000401730 RIMBP3CA6NJZ7 1639 aa20.88■□□□□ 0.93
SNRNP70-202ENST00000401730 RIMBP3BA6NNM3 1639 aa20.88■□□□□ 0.93
SNRNP70-202ENST00000401730 RIMBP3Q9UFD9 1639 aa20.88■□□□□ 0.93
SNRNP70-202ENST00000401730 ERC2O15083 957 aa20.88■□□□□ 0.93
SNRNP70-202ENST00000401730 ST18O60284 1047 aa20.88■□□□□ 0.93
SNRNP70-202ENST00000401730 HAP1P54257 671 aaPredicted RBP20.88■□□□□ 0.93
SNRNP70-202ENST00000401730 PLEKHG3A1L390 1219 aa20.87■□□□□ 0.93
SNRNP70-202ENST00000401730 XPCQ01831 940 aaPredicted RBP20.87■□□□□ 0.93
SNRNP70-202ENST00000401730 IL17REQ8NFR9 667 aa20.87■□□□□ 0.93
SNRNP70-202ENST00000401730 USP6P35125 1406 aa20.86■□□□□ 0.93
SNRNP70-202ENST00000401730 REC8O95072 547 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms