RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 CCDC85AQ96PX6 553 aaPredicted RBP7.14□□□□□ -1.27
RPA3-203ENST00000401447 LILRA1O75019 489 aa7.13□□□□□ -1.27
RPA3-203ENST00000401447 SKIP12755 728 aa7.13□□□□□ -1.27
RPA3-203ENST00000401447 C6orf118Q5T5N4 469 aa7.13□□□□□ -1.27
RPA3-203ENST00000401447 CYP2U1Q7Z449 544 aa7.13□□□□□ -1.27
RPA3-203ENST00000401447 NPAS3Q8IXF0 933 aa7.13□□□□□ -1.27
RPA3-203ENST00000401447 NFATC2IPQ8NCF5 419 aa7.13□□□□□ -1.27
RPA3-203ENST00000401447 ADAMTS19Q8TE59 1207 aa7.13□□□□□ -1.27
RPA3-203ENST00000401447 SIRT1Q96EB6 747 aa7.13□□□□□ -1.27
RPA3-203ENST00000401447 PURBQ96QR8 312 aaKnown RBP7.13□□□□□ -1.27
RPA3-203ENST00000401447 PIK3CDO00329 1044 aa7.12□□□□□ -1.27
RPA3-203ENST00000401447 SCTRP47872 440 aa7.12□□□□□ -1.27
RPA3-203ENST00000401447 RELBQ01201 579 aa7.12□□□□□ -1.27
RPA3-203ENST00000401447 PHTF2Q8N3S3 785 aa7.12□□□□□ -1.27
RPA3-203ENST00000401447 ATP5J2-PTCD1G3V325 749 aa7.11□□□□□ -1.27
RPA3-203ENST00000401447 LORP23490 312 aaPredicted RBP7.11□□□□□ -1.27
RPA3-203ENST00000401447 USP4Q13107 963 aa7.11□□□□□ -1.27
RPA3-203ENST00000401447 EML3Q32P44 896 aa7.11□□□□□ -1.27
RPA3-203ENST00000401447 ZFP42Q96MM3 310 aa7.11□□□□□ -1.27
RPA3-203ENST00000401447 ZNF777Q9ULD5 760 aaPredicted RBP7.11□□□□□ -1.27
RPA3-203ENST00000401447 USP17L5A8MUK1 530 aa7.1□□□□□ -1.27
RPA3-203ENST00000401447 ADD1P35611 737 aaKnown RBP7.1□□□□□ -1.27
RPA3-203ENST00000401447 SLC16A10Q8TF71 515 aa7.1□□□□□ -1.27
RPA3-203ENST00000401447 AGBL1Q96MI9 1066 aa7.1□□□□□ -1.27
RPA3-203ENST00000401447 UCN2Q96RP3 112 aa7.1□□□□□ -1.27
RPA3-203ENST00000401447 CDCA7Q9BWT1 371 aaPredicted RBP7.1□□□□□ -1.27
RPA3-203ENST00000401447 CHIC2Q9UKJ5 165 aa7.1□□□□□ -1.27
RPA3-203ENST00000401447 H3BM21 787 aa7.08□□□□□ -1.28
RPA3-203ENST00000401447 SPINT1O43278 529 aa7.08□□□□□ -1.28
RPA3-203ENST00000401447 ATP9BO43861 1147 aa7.08□□□□□ -1.28
RPA3-203ENST00000401447 LZTS3O60299 673 aaPredicted RBP7.08□□□□□ -1.28
RPA3-203ENST00000401447 GMPRP36959 345 aa7.08□□□□□ -1.28
RPA3-203ENST00000401447 PTGIRP43119 386 aa7.08□□□□□ -1.28
RPA3-203ENST00000401447 NCOA4Q13772 614 aa7.08□□□□□ -1.28
RPA3-203ENST00000401447 OSBPL3Q9H4L5 887 aa7.08□□□□□ -1.28
RPA3-203ENST00000401447 ZNF395Q9H8N7 513 aaPredicted RBP7.08□□□□□ -1.28
RPA3-203ENST00000401447 POLMQ9NP87 494 aaPredicted RBP7.08□□□□□ -1.28
RPA3-203ENST00000401447 USP17L3A6NCW0 530 aa7.07□□□□□ -1.28
RPA3-203ENST00000401447 USP17L4A6NCW7 530 aa7.07□□□□□ -1.28
RPA3-203ENST00000401447 TTLL8A6PVC2 850 aa7.07□□□□□ -1.28
RPA3-203ENST00000401447 MAN1A2O60476 641 aa7.07□□□□□ -1.28
RPA3-203ENST00000401447 TSGA10IPQ3SY00 556 aa7.07□□□□□ -1.28
RPA3-203ENST00000401447 USP17L2Q6R6M4 530 aa7.07□□□□□ -1.28
RPA3-203ENST00000401447 TBC1D9Q6ZT07 1266 aa7.07□□□□□ -1.28
RPA3-203ENST00000401447 USP17L1Q7RTZ2 530 aa7.07□□□□□ -1.28
RPA3-203ENST00000401447 DEPDC4Q8N2C3 294 aa7.07□□□□□ -1.28
RPA3-203ENST00000401447 IRF7Q92985 503 aa7.07□□□□□ -1.28
RPA3-203ENST00000401447 ARHGEF10LQ9HCE6 1279 aa7.07□□□□□ -1.28
RPA3-203ENST00000401447 NOD1Q9Y239 953 aa7.07□□□□□ -1.28
RPA3-203ENST00000401447 ERBB4Q15303 1308 aa7.06□□□□□ -1.28
RPA3-203ENST00000401447 MEN1O00255 615 aa7.06□□□□□ -1.28
RPA3-203ENST00000401447 GNRH1P01148 92 aa7.06□□□□□ -1.28
RPA3-203ENST00000401447 PSME1Q06323 249 aa7.06□□□□□ -1.28
RPA3-203ENST00000401447 PLEKHM2Q8IWE5 1019 aa7.06□□□□□ -1.28
RPA3-203ENST00000401447 NLRP3Q96P20 1036 aa7.06□□□□□ -1.28
RPA3-203ENST00000401447 INSM2Q96T92 566 aaPredicted RBP7.06□□□□□ -1.28
RPA3-203ENST00000401447 PALM3A6NDB9 673 aaPredicted RBP7.05□□□□□ -1.28
RPA3-203ENST00000401447 VEGFBP49765 207 aa7.05□□□□□ -1.28
RPA3-203ENST00000401447 ESCO1Q5FWF5 840 aa7.05□□□□□ -1.28
RPA3-203ENST00000401447 TRIM50Q86XT4 487 aa7.05□□□□□ -1.28
RPA3-203ENST00000401447 PPP1R12CQ9BZL4 782 aa7.05□□□□□ -1.28
RPA3-203ENST00000401447 RAB6BQ9NRW1 208 aa7.05□□□□□ -1.28
RPA3-203ENST00000401447 SOS2Q07890 1332 aaPredicted RBP7.04□□□□□ -1.28
RPA3-203ENST00000401447 A0A1W2PRU2 124 aa7.04□□□□□ -1.28
RPA3-203ENST00000401447 ATP1A2P50993 1020 aa7.04□□□□□ -1.28
RPA3-203ENST00000401447 GTF2IP78347 998 aa7.04□□□□□ -1.28
RPA3-203ENST00000401447 CLN3Q13286 438 aa7.04□□□□□ -1.28
RPA3-203ENST00000401447 KDF1Q8NAX2 398 aaPredicted RBP7.04□□□□□ -1.28
RPA3-203ENST00000401447 CCDC97Q96F63 343 aaPredicted RBP7.04□□□□□ -1.28
RPA3-203ENST00000401447 TFIP11Q9UBB9 837 aaKnown RBP7.04□□□□□ -1.28
RPA3-203ENST00000401447 MAFBQ9Y5Q3 323 aaPredicted RBP7.04□□□□□ -1.28
RPA3-203ENST00000401447 GPC1P35052 558 aa7.03□□□□□ -1.28
RPA3-203ENST00000401447 CTSOP43234 321 aaPredicted RBP7.03□□□□□ -1.28
RPA3-203ENST00000401447 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.03□□□□□ -1.284e-7■□□□□ 10.1
RPA3-203ENST00000401447 ZSCAN1Q8NBB4 408 aa7.03□□□□□ -1.28
RPA3-203ENST00000401447 GTF2E1P29083 439 aaPredicted RBP7.02□□□□□ -1.29
RPA3-203ENST00000401447 SLC27A3Q5K4L6 730 aa7.02□□□□□ -1.29
RPA3-203ENST00000401447 RNF217Q8TC41 542 aa7.02□□□□□ -1.29
RPA3-203ENST00000401447 CNKSR1Q969H4 720 aa7.02□□□□□ -1.29
RPA3-203ENST00000401447 DNMT3LQ9UJW3 386 aa7.02□□□□□ -1.29
RPA3-203ENST00000401447 FAM181BA6NEQ2 426 aa7.01□□□□□ -1.29
RPA3-203ENST00000401447 ARID3CA6NKF2 412 aa7.01□□□□□ -1.29
RPA3-203ENST00000401447 FIGNL2A6NMB9 653 aa7.01□□□□□ -1.29
RPA3-203ENST00000401447 SOBPA7XYQ1 873 aa7.01□□□□□ -1.29
RPA3-203ENST00000401447 VSIG8P0DPA2 414 aa7.01□□□□□ -1.29
RPA3-203ENST00000401447 LMOD1P29536 600 aaPredicted RBP7.01□□□□□ -1.29
RPA3-203ENST00000401447 GDF10P55107 478 aa7.01□□□□□ -1.29
RPA3-203ENST00000401447 FOXD4L5Q5VV16 416 aaPredicted RBP7.01□□□□□ -1.29
RPA3-203ENST00000401447 ESYT1Q9BSJ8 1104 aa7.01□□□□□ -1.29
RPA3-203ENST00000401447 MKRN1Q9UHC7 482 aaKnown RBP7.01□□□□□ -1.29
RPA3-203ENST00000401447 TIMELESSQ9UNS1 1208 aa7.01□□□□□ -1.29
RPA3-203ENST00000401447 IL2RAP01589 272 aa7□□□□□ -1.29
RPA3-203ENST00000401447 RNF144AP50876 292 aaPredicted RBP7□□□□□ -1.29
RPA3-203ENST00000401447 TLR1Q15399 786 aa7□□□□□ -1.29
RPA3-203ENST00000401447 LYSMD3Q7Z3D4 306 aa7□□□□□ -1.29
RPA3-203ENST00000401447 ETNK1Q9HBU6 452 aa7□□□□□ -1.29
RPA3-203ENST00000401447 DNAAF2Q9NVR5 837 aaKnown RBP7□□□□□ -1.29
RPA3-203ENST00000401447 SERPINA10Q9UK55 444 aa7□□□□□ -1.29
RPA3-203ENST00000401447 RBM19Q9Y4C8 960 aaKnown RBP7□□□□□ -1.29
RPA3-203ENST00000401447 SCNN1DP51172 638 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms