RNA–Protein interactions for RNA: ENST00000399598.6

UBXN2B-201, Transcript of UBX domain protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2B, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-201ENST00000399598 THEMISQ8N1K5 641 aaPredicted RBP17.95■□□□□ 0.46
UBXN2B-201ENST00000399598 CCDC85AQ96PX6 553 aaPredicted RBP17.95■□□□□ 0.46
UBXN2B-201ENST00000399598 UQCRHLA0A096LP55 91 aa17.94■□□□□ 0.46
UBXN2B-201ENST00000399598 UQCRHP07919 91 aa17.94■□□□□ 0.46
UBXN2B-201ENST00000399598 NAIPQ13075 1403 aa17.94■□□□□ 0.46
UBXN2B-201ENST00000399598 SPG7Q9UQ90 795 aa17.94■□□□□ 0.46
UBXN2B-201ENST00000399598 DUSP27Q5VZP5 1158 aa17.94■□□□□ 0.46
UBXN2B-201ENST00000399598 ZHX3Q9H4I2 956 aa17.93■□□□□ 0.46
UBXN2B-201ENST00000399598 CCDC61Q9Y6R9 512 aa17.93■□□□□ 0.46
UBXN2B-201ENST00000399598 KRT32Q14532 448 aa17.93■□□□□ 0.46
UBXN2B-201ENST00000399598 DACH1Q9UI36 760 aa17.93■□□□□ 0.46
UBXN2B-201ENST00000399598 CNKSR2Q8WXI2 1034 aa17.93■□□□□ 0.46
UBXN2B-201ENST00000399598 CTNNA3Q9UI47 895 aa17.92■□□□□ 0.46
UBXN2B-201ENST00000399598 MX1P20591 662 aa17.92■□□□□ 0.46
UBXN2B-201ENST00000399598 STIM1Q13586 685 aa17.92■□□□□ 0.46
UBXN2B-201ENST00000399598 TSPYL1Q9H0U9 437 aa17.92■□□□□ 0.46
UBXN2B-201ENST00000399598 DEF6Q9H4E7 631 aa17.92■□□□□ 0.46
UBXN2B-201ENST00000399598 DHX8Q14562 1220 aaKnown RBP17.91■□□□□ 0.46
UBXN2B-201ENST00000399598 ZSCAN25Q6NSZ9 544 aa17.91■□□□□ 0.46
UBXN2B-201ENST00000399598 CCDC83Q8IWF9 413 aa17.91■□□□□ 0.46
UBXN2B-201ENST00000399598 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.91■□□□□ 0.462e-11■■■■■ 173.1
UBXN2B-201ENST00000399598 RPGRIP1LQ68CZ1 1315 aa17.91■□□□□ 0.46
UBXN2B-201ENST00000399598 XPCQ01831 940 aaPredicted RBP17.91■□□□□ 0.46
UBXN2B-201ENST00000399598 NUDT16Q96DE0 195 aaKnown RBP17.91■□□□□ 0.46
UBXN2B-201ENST00000399598 MYO6Q9UM54 1294 aa17.91■□□□□ 0.46
UBXN2B-201ENST00000399598 TDO2P48775 406 aa17.91■□□□□ 0.46
UBXN2B-201ENST00000399598 CAMK4Q16566 473 aa17.91■□□□□ 0.46
UBXN2B-201ENST00000399598 LEKR1Q6ZMV7 388 aa17.91■□□□□ 0.46
UBXN2B-201ENST00000399598 EFCAB5A4FU69 1503 aa17.9■□□□□ 0.46
UBXN2B-201ENST00000399598 PLEKHH2Q8IVE3 1493 aa17.9■□□□□ 0.46
UBXN2B-201ENST00000399598 CDKL5O76039 1030 aa17.9■□□□□ 0.46
UBXN2B-201ENST00000399598 TIAM1Q13009 1591 aa17.9■□□□□ 0.46
UBXN2B-201ENST00000399598 IDH1O75874 414 aaKnown RBP17.9■□□□□ 0.46
UBXN2B-201ENST00000399598 MAP3K11Q16584 847 aa17.9■□□□□ 0.46
UBXN2B-201ENST00000399598 ZSCAN30Q86W11 494 aa17.9■□□□□ 0.46
UBXN2B-201ENST00000399598 KIF1BPQ96EK5 621 aa17.9■□□□□ 0.46
UBXN2B-201ENST00000399598 UBAC1Q9BSL1 405 aa17.9■□□□□ 0.46
UBXN2B-201ENST00000399598 TANGO6Q9C0B7 1094 aa17.9■□□□□ 0.46
UBXN2B-201ENST00000399598 SPINK5Q9NQ38 1064 aaPredicted RBP17.9■□□□□ 0.46
UBXN2B-201ENST00000399598 GNAT3A8MTJ3 354 aa17.9■□□□□ 0.46
UBXN2B-201ENST00000399598 PRDM11Q9NQV5 511 aa17.9■□□□□ 0.46
UBXN2B-201ENST00000399598 SYCP1Q15431 976 aa17.89■□□□□ 0.45
UBXN2B-201ENST00000399598 PRPF40BQ6NWY9 871 aaKnown RBP17.89■□□□□ 0.45
UBXN2B-201ENST00000399598 CBFA2T2O43439 604 aa17.89■□□□□ 0.45
UBXN2B-201ENST00000399598 NOL7Q9UMY1 257 aaKnown RBP17.89■□□□□ 0.45
UBXN2B-201ENST00000399598 GLRX3O76003 335 aaKnown RBP17.89■□□□□ 0.45
UBXN2B-201ENST00000399598 ZC3H6P61129 1189 aaKnown RBP17.89■□□□□ 0.45
UBXN2B-201ENST00000399598 SOGA3Q5TF21 947 aa17.88■□□□□ 0.45
UBXN2B-201ENST00000399598 WAPLQ7Z5K2 1190 aa17.88■□□□□ 0.45
UBXN2B-201ENST00000399598 CCDC181Q5TID7 509 aa17.88■□□□□ 0.45
UBXN2B-201ENST00000399598 PIBF1Q8WXW3 757 aa17.88■□□□□ 0.45
UBXN2B-201ENST00000399598 F6X3S4 739 aa17.87■□□□□ 0.45
UBXN2B-201ENST00000399598 SSBP05455 408 aaKnown RBP eCLIP17.87■□□□□ 0.45
UBXN2B-201ENST00000399598 CCDC191Q8NCU4 936 aa17.87■□□□□ 0.45
UBXN2B-201ENST00000399598 TBC1D2Q9BYX2 928 aa17.87■□□□□ 0.45
UBXN2B-201ENST00000399598 BOLA2Q9H3K6 86 aa17.87■□□□□ 0.45
UBXN2B-201ENST00000399598 RDXP35241 583 aaKnown RBP17.87■□□□□ 0.45
UBXN2B-201ENST00000399598 TMEM132AQ24JP5 1023 aa17.87■□□□□ 0.45
UBXN2B-201ENST00000399598 LUC7LQ9NQ29 371 aaKnown RBP17.87■□□□□ 0.45
UBXN2B-201ENST00000399598 RAI14Q9P0K7 980 aa17.86■□□□□ 0.45
UBXN2B-201ENST00000399598 CFAP100Q494V2 611 aa17.86■□□□□ 0.45
UBXN2B-201ENST00000399598 LRP2BPQ9P2M1 347 aa17.86■□□□□ 0.45
UBXN2B-201ENST00000399598 ALDH1L2Q3SY69 923 aa17.86■□□□□ 0.45
UBXN2B-201ENST00000399598 PDCL3Q9H2J4 239 aa17.86■□□□□ 0.45
UBXN2B-201ENST00000399598 SSFA2P28290 1259 aa17.85■□□□□ 0.45
UBXN2B-201ENST00000399598 IMMTQ16891 758 aaKnown RBP17.85■□□□□ 0.45
UBXN2B-201ENST00000399598 ERLIN1O75477 346 aa17.85■□□□□ 0.45
UBXN2B-201ENST00000399598 PDIA4P13667 645 aaKnown RBP17.84■□□□□ 0.45
UBXN2B-201ENST00000399598 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.84■□□□□ 0.45
UBXN2B-201ENST00000399598 ABCF2Q9UG63 623 aa17.84■□□□□ 0.45
UBXN2B-201ENST00000399598 AIDAQ96BJ3 306 aa17.84■□□□□ 0.45
UBXN2B-201ENST00000399598 NESP48681 1621 aa17.84■□□□□ 0.45
UBXN2B-201ENST00000399598 TRIM27P14373 513 aa17.83■□□□□ 0.45
UBXN2B-201ENST00000399598 EMILIN1Q9Y6C2 1016 aa17.83■□□□□ 0.45
UBXN2B-201ENST00000399598 PTCD1O75127 700 aaKnown RBP17.83■□□□□ 0.45
UBXN2B-201ENST00000399598 NME9Q86XW9 330 aa17.83■□□□□ 0.45
UBXN2B-201ENST00000399598 SMTNL1A8MU46 457 aa17.83■□□□□ 0.44
UBXN2B-201ENST00000399598 NKTRP30414 1462 aaKnown RBP17.83■□□□□ 0.44
UBXN2B-201ENST00000399598 GOLGA6L10A6NI86 522 aa17.83■□□□□ 0.44
UBXN2B-201ENST00000399598 TAF7Q15545 349 aaPredicted RBP17.83■□□□□ 0.44
UBXN2B-201ENST00000399598 RAB11FIP3O75154 756 aa17.82■□□□□ 0.44
UBXN2B-201ENST00000399598 CENPHQ9H3R5 247 aa17.82■□□□□ 0.44
UBXN2B-201ENST00000399598 U3KPZ7 1027 aaPredicted RBP17.82■□□□□ 0.44
UBXN2B-201ENST00000399598 TNPO1Q92973 898 aaKnown RBP17.82■□□□□ 0.44
UBXN2B-201ENST00000399598 LRRFIP2Q9Y608 721 aaKnown RBP17.82■□□□□ 0.44
UBXN2B-201ENST00000399598 ERLIN2O94905 339 aa17.82■□□□□ 0.44
UBXN2B-201ENST00000399598 UBXN4Q92575 508 aa17.82■□□□□ 0.44
UBXN2B-201ENST00000399598 ARHGAP29Q52LW3 1261 aa17.81■□□□□ 0.44
UBXN2B-201ENST00000399598 NEFHP12036 1026 aa17.81■□□□□ 0.44
UBXN2B-201ENST00000399598 BMP2KQ9NSY1 1161 aaPredicted RBP17.81■□□□□ 0.44
UBXN2B-201ENST00000399598 METTL24Q5JXM2 366 aa17.81■□□□□ 0.44
UBXN2B-201ENST00000399598 SCAND2PQ9GZW5 306 aaPredicted RBP17.81■□□□□ 0.44
UBXN2B-201ENST00000399598 CCDC8Q9H0W5 538 aaPredicted RBP17.81■□□□□ 0.44
UBXN2B-201ENST00000399598 SFPQP23246 707 aaKnown RBP eCLIP17.81■□□□□ 0.44
UBXN2B-201ENST00000399598 FAM193AP78312 1265 aa17.81■□□□□ 0.44
UBXN2B-201ENST00000399598 LARP6Q9BRS8 491 aaKnown RBP17.81■□□□□ 0.44
UBXN2B-201ENST00000399598 LRPPRCP42704 1394 aaKnown RBP17.81■□□□□ 0.44
UBXN2B-201ENST00000399598 EPB41L2O43491 1005 aaKnown RBP17.8■□□□□ 0.44
UBXN2B-201ENST00000399598 EIF3JO75822 258 aaKnown RBP17.8■□□□□ 0.44
UBXN2B-201ENST00000399598 EIF5P55010 431 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms