RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 TSPYL6Q8N831 410 aa19.5■□□□□ 0.71
COL25A1-201ENST00000399126 LRRC59Q96AG4 307 aaKnown RBP19.5■□□□□ 0.71
COL25A1-201ENST00000399126 IFT57Q9NWB7 429 aa19.5■□□□□ 0.71
COL25A1-201ENST00000399126 NBPF6Q5VWK0 638 aa19.49■□□□□ 0.71
COL25A1-201ENST00000399126 CLUAP1Q96AJ1 413 aa19.49■□□□□ 0.71
COL25A1-201ENST00000399126 NBPF4Q96M43 638 aa19.49■□□□□ 0.71
COL25A1-201ENST00000399126 COG6Q9Y2V7 657 aa19.49■□□□□ 0.71
COL25A1-201ENST00000399126 ELL2O00472 640 aaPredicted RBP19.49■□□□□ 0.71
COL25A1-201ENST00000399126 CABLES1Q8TDN4 633 aa19.49■□□□□ 0.71
COL25A1-201ENST00000399126 SMC4Q9NTJ3 1288 aa19.49■□□□□ 0.71
COL25A1-201ENST00000399126 ZC3H6P61129 1189 aaKnown RBP19.48■□□□□ 0.71
COL25A1-201ENST00000399126 GNAI1P63096 354 aa19.48■□□□□ 0.71
COL25A1-201ENST00000399126 BRINP3Q76B58 766 aa19.48■□□□□ 0.71
COL25A1-201ENST00000399126 AXIN2Q9Y2T1 843 aa19.48■□□□□ 0.71
COL25A1-201ENST00000399126 PHRF1Q9P1Y6 1649 aaKnown RBP19.48■□□□□ 0.71
COL25A1-201ENST00000399126 RGPD5Q99666 1765 aa19.48■□□□□ 0.71
COL25A1-201ENST00000399126 CFAP44Q96MT7 982 aa19.48■□□□□ 0.71
COL25A1-201ENST00000399126 NPHP3Q7Z494 1330 aa19.47■□□□□ 0.71
COL25A1-201ENST00000399126 PXDNQ92626 1479 aa19.47■□□□□ 0.71
COL25A1-201ENST00000399126 CALD1Q05682 793 aaKnown RBP19.47■□□□□ 0.71
COL25A1-201ENST00000399126 CT47B1P0C2W7 299 aaPredicted RBP19.47■□□□□ 0.71
COL25A1-201ENST00000399126 PDE3AQ14432 1141 aa19.46■□□□□ 0.71
COL25A1-201ENST00000399126 KRT24Q2M2I5 525 aa19.45■□□□□ 0.7
COL25A1-201ENST00000399126 C8orf58Q8NAV2 365 aa19.45■□□□□ 0.7
COL25A1-201ENST00000399126 SKAP1Q86WV1 359 aa19.45■□□□□ 0.7
COL25A1-201ENST00000399126 RBM19Q9Y4C8 960 aaKnown RBP19.45■□□□□ 0.7
COL25A1-201ENST00000399126 TCERG1O14776 1098 aaKnown RBP19.44■□□□□ 0.7
COL25A1-201ENST00000399126 TMEM132AQ24JP5 1023 aa19.44■□□□□ 0.7
COL25A1-201ENST00000399126 MIS18AQ9NYP9 233 aa19.44■□□□□ 0.7
COL25A1-201ENST00000399126 SLAIN2Q9P270 581 aa19.44■□□□□ 0.7
COL25A1-201ENST00000399126 TNS3Q68CZ2 1445 aa19.44■□□□□ 0.7
COL25A1-201ENST00000399126 FBXO3Q9UK99 471 aa19.44■□□□□ 0.7
COL25A1-201ENST00000399126 VAMP4O75379 141 aa19.43■□□□□ 0.7
COL25A1-201ENST00000399126 CRB1P82279 1406 aa19.43■□□□□ 0.7
COL25A1-201ENST00000399126 DEKP35659 375 aaKnown RBP19.43■□□□□ 0.7
COL25A1-201ENST00000399126 ANKRD24Q8TF21 1146 aa19.42■□□□□ 0.7
COL25A1-201ENST00000399126 NOB1Q9ULX3 412 aaKnown RBP19.42■□□□□ 0.7
COL25A1-201ENST00000399126 GAS2L2Q8NHY3 880 aa19.42■□□□□ 0.7
COL25A1-201ENST00000399126 SPATA31A3Q5VYP0 1347 aa19.41■□□□□ 0.7
COL25A1-201ENST00000399126 TRIM27P14373 513 aa19.41■□□□□ 0.7
COL25A1-201ENST00000399126 ZKSCAN2Q63HK3 967 aa19.41■□□□□ 0.7
COL25A1-201ENST00000399126 CHL1O00533 1208 aa19.4■□□□□ 0.7
COL25A1-201ENST00000399126 TWISTNBQ3B726 338 aaPredicted RBP19.4■□□□□ 0.7
COL25A1-201ENST00000399126 RTF1Q92541 710 aaKnown RBP19.4■□□□□ 0.7
COL25A1-201ENST00000399126 PLCB2Q00722 1185 aa19.39■□□□□ 0.7
COL25A1-201ENST00000399126 CRYBG1Q9Y4K1 1723 aa19.39■□□□□ 0.69
COL25A1-201ENST00000399126 CHRNA2Q15822 529 aa19.39■□□□□ 0.69
COL25A1-201ENST00000399126 KDM2BQ8NHM5 1336 aa19.39■□□□□ 0.69
COL25A1-201ENST00000399126 TAF7LQ5H9L4 462 aa19.38■□□□□ 0.69
COL25A1-201ENST00000399126 GNAT3A8MTJ3 354 aa19.38■□□□□ 0.69
COL25A1-201ENST00000399126 ALDH1L2Q3SY69 923 aa19.37■□□□□ 0.69
COL25A1-201ENST00000399126 FTSJ3Q8IY81 847 aaKnown RBP19.37■□□□□ 0.69
COL25A1-201ENST00000399126 DZIP1LQ8IYY4 767 aaKnown RBP19.37■□□□□ 0.69
COL25A1-201ENST00000399126 IL17REQ8NFR9 667 aa19.37■□□□□ 0.69
COL25A1-201ENST00000399126 MAP3K5Q99683 1374 aa19.37■□□□□ 0.69
COL25A1-201ENST00000399126 ATF7IPQ6VMQ6 1270 aa19.37■□□□□ 0.69
COL25A1-201ENST00000399126 ERBB3P21860 1342 aa19.36■□□□□ 0.69
COL25A1-201ENST00000399126 LRRC37A3O60309 1634 aa19.36■□□□□ 0.69
COL25A1-201ENST00000399126 COL18A1P39060 1754 aa19.36■□□□□ 0.69
COL25A1-201ENST00000399126 MSH5O43196 834 aa19.36■□□□□ 0.69
COL25A1-201ENST00000399126 MRPL50Q8N5N7 158 aaKnown RBP19.36■□□□□ 0.69
COL25A1-201ENST00000399126 TSPYL4Q9UJ04 414 aa19.35■□□□□ 0.69
COL25A1-201ENST00000399126 KIAA0232Q92628 1395 aa19.35■□□□□ 0.69
COL25A1-201ENST00000399126 MVPQ14764 893 aaKnown RBP19.34■□□□□ 0.69
COL25A1-201ENST00000399126 SOS2Q07890 1332 aaPredicted RBP19.34■□□□□ 0.69
COL25A1-201ENST00000399126 KIF16BQ96L93 1317 aa19.34■□□□□ 0.69
COL25A1-201ENST00000399126 IGHDP01880 384 aa19.34■□□□□ 0.69
COL25A1-201ENST00000399126 NCAPD2Q15021 1401 aa19.34■□□□□ 0.69
COL25A1-201ENST00000399126 CAMTA1Q9Y6Y1 1673 aa19.33■□□□□ 0.69
COL25A1-201ENST00000399126 TMEM57Q8N5G2 664 aa19.33■□□□□ 0.68
COL25A1-201ENST00000399126 ZNF428Q96B54 188 aa19.32■□□□□ 0.68
COL25A1-201ENST00000399126 PCDHB15Q9Y5E8 787 aa19.32■□□□□ 0.68
COL25A1-201ENST00000399126 ITPRIPQ8IWB1 547 aa19.32■□□□□ 0.68
COL25A1-201ENST00000399126 LGR6Q9HBX8 967 aa19.32■□□□□ 0.68
COL25A1-201ENST00000399126 HTATSF1O43719 755 aaKnown RBP19.31■□□□□ 0.68
COL25A1-201ENST00000399126 NLRP2Q9NX02 1062 aa19.31■□□□□ 0.68
COL25A1-201ENST00000399126 ZNF530Q6P9A1 599 aaPredicted RBP19.3■□□□□ 0.68
COL25A1-201ENST00000399126 CENPQQ7L2Z9 268 aaPredicted RBP19.3■□□□□ 0.68
COL25A1-201ENST00000399126 FGD1P98174 961 aa19.3■□□□□ 0.68
COL25A1-201ENST00000399126 LMO7Q8WWI1 1683 aa19.3■□□□□ 0.68
COL25A1-201ENST00000399126 BRPF1P55201 1214 aaPredicted RBP19.29■□□□□ 0.68
COL25A1-201ENST00000399126 IPO8O15397 1037 aaKnown RBP19.29■□□□□ 0.68
COL25A1-201ENST00000399126 VIRMAQ69YN4 1812 aaKnown RBP19.29■□□□□ 0.68
COL25A1-201ENST00000399126 MPRIPQ6WCQ1 1025 aa19.28■□□□□ 0.68
COL25A1-201ENST00000399126 NHSL1Q5SYE7 1610 aa19.28■□□□□ 0.68
COL25A1-201ENST00000399126 BRD2P25440 801 aaKnown RBP19.28■□□□□ 0.68
COL25A1-201ENST00000399126 FAM208AQ9UK61 1670 aaKnown RBP19.28■□□□□ 0.68
COL25A1-201ENST00000399126 CSB-PGBD3P0DP91 1061 aa19.28■□□□□ 0.68
COL25A1-201ENST00000399126 PLEKHO1Q53GL0 409 aaPredicted RBP19.27■□□□□ 0.68
COL25A1-201ENST00000399126 CEMIPQ8WUJ3 1361 aa19.27■□□□□ 0.68
COL25A1-201ENST00000399126 CPDO75976 1380 aa19.26■□□□□ 0.67
COL25A1-201ENST00000399126 MS4A1P11836 297 aa19.26■□□□□ 0.67
COL25A1-201ENST00000399126 ABCA3Q99758 1704 aa19.26■□□□□ 0.67
COL25A1-201ENST00000399126 MEGF6O75095 1541 aa19.25■□□□□ 0.67
COL25A1-201ENST00000399126 TAF7Q15545 349 aaPredicted RBP19.25■□□□□ 0.67
COL25A1-201ENST00000399126 AKAP4Q5JQC9 854 aa19.25■□□□□ 0.67
COL25A1-201ENST00000399126 PRDM11Q9NQV5 511 aa19.25■□□□□ 0.67
COL25A1-201ENST00000399126 DDX19BQ9UMR2 479 aa19.24■□□□□ 0.67
COL25A1-201ENST00000399126 AMOTQ4VCS5 1084 aa19.23■□□□□ 0.67
COL25A1-201ENST00000399126 NECTIN2Q92692 538 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms