RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 TAF3Q5VWG9 929 aa17.46■□□□□ 0.39
RPRD1A-202ENST00000399022 USHBP1Q8N6Y0 703 aa17.46■□□□□ 0.39
RPRD1A-202ENST00000399022 ZNF830Q96NB3 372 aaPredicted RBP17.46■□□□□ 0.39
RPRD1A-202ENST00000399022 CCT4P50991 539 aaKnown RBP17.46■□□□□ 0.38
RPRD1A-202ENST00000399022 RBM42Q9BTD8 480 aaKnown RBP17.46■□□□□ 0.38
RPRD1A-202ENST00000399022 ADGBQ8N7X0 1667 aa17.45■□□□□ 0.38
RPRD1A-202ENST00000399022 ERC2O15083 957 aa17.45■□□□□ 0.38
RPRD1A-202ENST00000399022 ZNF530Q6P9A1 599 aaPredicted RBP17.45■□□□□ 0.38
RPRD1A-202ENST00000399022 PRIM1P49642 420 aaKnown RBP17.45■□□□□ 0.38
RPRD1A-202ENST00000399022 POLKQ9UBT6 870 aa17.45■□□□□ 0.38
RPRD1A-202ENST00000399022 WDR33Q9C0J8 1336 aaKnown RBP17.45■□□□□ 0.38
RPRD1A-202ENST00000399022 PDE4CQ08493 712 aa17.44■□□□□ 0.38
RPRD1A-202ENST00000399022 TRERF1Q96PN7 1200 aa17.44■□□□□ 0.38
RPRD1A-202ENST00000399022 CLASRPQ8N2M8 674 aaKnown RBP17.44■□□□□ 0.38
RPRD1A-202ENST00000399022 GDPD2Q9HCC8 539 aa17.44■□□□□ 0.38
RPRD1A-202ENST00000399022 MAST1Q9Y2H9 1570 aa17.44■□□□□ 0.38
RPRD1A-202ENST00000399022 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.44■□□□□ 0.382e-9■■■□□ 19.1
RPRD1A-202ENST00000399022 CCDC192P0DO97 292 aa17.44■□□□□ 0.38
RPRD1A-202ENST00000399022 LRRCC1Q9C099 1032 aa17.44■□□□□ 0.38
RPRD1A-202ENST00000399022 AMOTL2Q9Y2J4 779 aa17.44■□□□□ 0.38
RPRD1A-202ENST00000399022 ABCA8O94911 1581 aa17.44■□□□□ 0.38
RPRD1A-202ENST00000399022 HSP90AB2PQ58FF8 381 aa17.44■□□□□ 0.38
RPRD1A-202ENST00000399022 RPAP2Q8IXW5 612 aaPredicted RBP17.44■□□□□ 0.38
RPRD1A-202ENST00000399022 PHACTR3Q96KR7 559 aa17.44■□□□□ 0.38
RPRD1A-202ENST00000399022 AEBP1Q8IUX7 1158 aa17.43■□□□□ 0.38
RPRD1A-202ENST00000399022 KDM5CP41229 1560 aa17.43■□□□□ 0.38
RPRD1A-202ENST00000399022 A0A1W2PP64 1363 aa17.43■□□□□ 0.38
RPRD1A-202ENST00000399022 TBC1D9Q6ZT07 1266 aa17.43■□□□□ 0.38
RPRD1A-202ENST00000399022 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.43■□□□□ 0.38
RPRD1A-202ENST00000399022 RAB3GAP1Q15042 981 aa17.43■□□□□ 0.38
RPRD1A-202ENST00000399022 HSP90AB4PQ58FF6 505 aa17.43■□□□□ 0.38
RPRD1A-202ENST00000399022 SMAP1Q8IYB5 467 aaPredicted RBP17.42■□□□□ 0.38
RPRD1A-202ENST00000399022 TSPYL6Q8N831 410 aa17.42■□□□□ 0.38
RPRD1A-202ENST00000399022 PRIMPOLQ96LW4 560 aa17.42■□□□□ 0.38
RPRD1A-202ENST00000399022 SRCIN1Q9C0H9 1055 aa17.42■□□□□ 0.38
RPRD1A-202ENST00000399022 MAGI2Q86UL8 1455 aa17.42■□□□□ 0.38
RPRD1A-202ENST00000399022 CCDC94Q9BW85 323 aaPredicted RBP17.42■□□□□ 0.38
RPRD1A-202ENST00000399022 PLEKHO1Q53GL0 409 aaPredicted RBP17.41■□□□□ 0.38
RPRD1A-202ENST00000399022 C8orf58Q8NAV2 365 aa17.41■□□□□ 0.38
RPRD1A-202ENST00000399022 SAMD9LQ8IVG5 1584 aa17.41■□□□□ 0.38
RPRD1A-202ENST00000399022 ACEP12821 1306 aa17.41■□□□□ 0.38
RPRD1A-202ENST00000399022 FAM177BA6PVY3 158 aa17.4■□□□□ 0.38
RPRD1A-202ENST00000399022 SRGAP3O43295 1099 aa17.4■□□□□ 0.38
RPRD1A-202ENST00000399022 LRSAM1Q6UWE0 723 aa17.4■□□□□ 0.38
RPRD1A-202ENST00000399022 PROSER2Q86WR7 435 aaPredicted RBP17.4■□□□□ 0.38
RPRD1A-202ENST00000399022 EVA1CP58658 441 aa17.4■□□□□ 0.38
RPRD1A-202ENST00000399022 KRT24Q2M2I5 525 aa17.4■□□□□ 0.38
RPRD1A-202ENST00000399022 SMC5Q8IY18 1101 aa17.4■□□□□ 0.38
RPRD1A-202ENST00000399022 ADCY5O95622 1261 aa17.39■□□□□ 0.38
RPRD1A-202ENST00000399022 BMP2KLQ5H9B9 411 aa17.39■□□□□ 0.38
RPRD1A-202ENST00000399022 UPF3BQ9BZI7 483 aaKnown RBP17.39■□□□□ 0.38
RPRD1A-202ENST00000399022 NOLC1Q14978 699 aaKnown RBP eCLIP17.39■□□□□ 0.377e-8■■■■□ 24.9
RPRD1A-202ENST00000399022 SNX21Q969T3 373 aa17.39■□□□□ 0.37
RPRD1A-202ENST00000399022 ATP7AQ04656 1500 aa17.39■□□□□ 0.37
RPRD1A-202ENST00000399022 GNAT3A8MTJ3 354 aa17.39■□□□□ 0.37
RPRD1A-202ENST00000399022 ATF3P18847 181 aa17.39■□□□□ 0.37
RPRD1A-202ENST00000399022 HS1BP3Q53T59 392 aa17.39■□□□□ 0.37
RPRD1A-202ENST00000399022 NEUROD6Q96NK8 337 aa17.39■□□□□ 0.37
RPRD1A-202ENST00000399022 SIL1Q9H173 461 aa17.39■□□□□ 0.37
RPRD1A-202ENST00000399022 ARHGEF5Q12774 1597 aa17.39■□□□□ 0.37
RPRD1A-202ENST00000399022 CNTROBQ8N137 903 aa17.39■□□□□ 0.37
RPRD1A-202ENST00000399022 TTC12Q9H892 705 aaPredicted RBP17.39■□□□□ 0.37
RPRD1A-202ENST00000399022 TOMM22Q9NS69 142 aa17.39■□□□□ 0.37
RPRD1A-202ENST00000399022 IL16Q14005 1332 aa17.38■□□□□ 0.37
RPRD1A-202ENST00000399022 BLMP54132 1417 aaPredicted RBP17.38■□□□□ 0.37
RPRD1A-202ENST00000399022 ZMYM4Q5VZL5 1548 aa17.38■□□□□ 0.37
RPRD1A-202ENST00000399022 PLA2R1Q13018 1463 aa17.38■□□□□ 0.37
RPRD1A-202ENST00000399022 FOSBP53539 338 aa17.38■□□□□ 0.37
RPRD1A-202ENST00000399022 NUTM1Q86Y26 1132 aa17.38■□□□□ 0.37
RPRD1A-202ENST00000399022 C16orf45Q96MC5 204 aaPredicted RBP17.38■□□□□ 0.37
RPRD1A-202ENST00000399022 NPC1L1Q9UHC9 1359 aa17.37■□□□□ 0.37
RPRD1A-202ENST00000399022 ZC3H6P61129 1189 aaKnown RBP17.37■□□□□ 0.37
RPRD1A-202ENST00000399022 TSHZ3Q63HK5 1081 aa17.37■□□□□ 0.37
RPRD1A-202ENST00000399022 CCDC73Q6ZRK6 1079 aa17.37■□□□□ 0.37
RPRD1A-202ENST00000399022 NOL7Q9UMY1 257 aaKnown RBP17.37■□□□□ 0.37
RPRD1A-202ENST00000399022 FSD2A1L4K1 749 aa17.37■□□□□ 0.37
RPRD1A-202ENST00000399022 HDAC1Q13547 482 aaPredicted RBP17.37■□□□□ 0.37
RPRD1A-202ENST00000399022 FILIP1Q7Z7B0 1213 aa17.36■□□□□ 0.37
RPRD1A-202ENST00000399022 GAS2L3Q86XJ1 694 aa17.36■□□□□ 0.37
RPRD1A-202ENST00000399022 FSD1Q9BTV5 496 aa17.36■□□□□ 0.37
RPRD1A-202ENST00000399022 CREBRFQ8IUR6 639 aa17.36■□□□□ 0.37
RPRD1A-202ENST00000399022 SYTL4Q96C24 671 aaPredicted RBP17.36■□□□□ 0.37
RPRD1A-202ENST00000399022 CWC15Q9P013 229 aaKnown RBP17.36■□□□□ 0.37
RPRD1A-202ENST00000399022 MYL6BP14649 208 aa17.36■□□□□ 0.37
RPRD1A-202ENST00000399022 NOM1Q5C9Z4 860 aaKnown RBP17.36■□□□□ 0.37
RPRD1A-202ENST00000399022 RBSNQ9H1K0 784 aa17.36■□□□□ 0.37
RPRD1A-202ENST00000399022 TNMDQ9H2S6 317 aa17.35■□□□□ 0.37
RPRD1A-202ENST00000399022 HCLS1P14317 486 aaPredicted RBP17.35■□□□□ 0.37
RPRD1A-202ENST00000399022 FMNL2Q96PY5 1086 aa17.35■□□□□ 0.37
RPRD1A-202ENST00000399022 PTPRTO14522 1441 aa17.35■□□□□ 0.37
RPRD1A-202ENST00000399022 ATP10AO60312 1499 aa17.35■□□□□ 0.37
RPRD1A-202ENST00000399022 RNF20Q5VTR2 975 aa17.34■□□□□ 0.37
RPRD1A-202ENST00000399022 MEIS3Q99687 375 aa17.34■□□□□ 0.37
RPRD1A-202ENST00000399022 GTPBP4Q9BZE4 634 aaKnown RBP17.34■□□□□ 0.37
RPRD1A-202ENST00000399022 BTBD11A6QL63 1104 aa17.34■□□□□ 0.37
RPRD1A-202ENST00000399022 CCDC183Q5T5S1 534 aa17.34■□□□□ 0.37
RPRD1A-202ENST00000399022 SDF4Q9BRK5 362 aa17.34■□□□□ 0.37
RPRD1A-202ENST00000399022 VAMP4O75379 141 aa17.34■□□□□ 0.37
RPRD1A-202ENST00000399022 NUCB1Q02818 461 aa17.34■□□□□ 0.37
RPRD1A-202ENST00000399022 ANKLE2Q86XL3 938 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms