RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 KRT27Q7Z3Y8 459 aa23.25■■□□□ 1.31
CSNK1D-204ENST00000398519 SHANK3Q9BYB0 1731 aa23.25■■□□□ 1.31
CSNK1D-204ENST00000398519 EXOC5O00471 708 aa23.24■■□□□ 1.31
CSNK1D-204ENST00000398519 PKD1L3Q7Z443 1732 aa23.24■■□□□ 1.31
CSNK1D-204ENST00000398519 PDE3BQ13370 1112 aa23.23■■□□□ 1.31
CSNK1D-204ENST00000398519 CCDC184Q52MB2 194 aa23.23■■□□□ 1.31
CSNK1D-204ENST00000398519 U2AF1L5P0DN76 240 aaPredicted RBP23.22■■□□□ 1.31
CSNK1D-204ENST00000398519 U2AF1Q01081 240 aaKnown RBP eCLIP23.22■■□□□ 1.316e-7■□□□□ 10.7
CSNK1D-204ENST00000398519 PLEKHG2Q9H7P9 1386 aa23.21■■□□□ 1.31
CSNK1D-204ENST00000398519 ZCRB1Q8TBF4 217 aaKnown RBP23.21■■□□□ 1.31
CSNK1D-204ENST00000398519 FAM182BQ5T319 152 aa23.2■■□□□ 1.3
CSNK1D-204ENST00000398519 MARCH10Q8NA82 808 aaPredicted RBP23.2■■□□□ 1.3
CSNK1D-204ENST00000398519 RSPH6AQ9H0K4 717 aa23.18■■□□□ 1.3
CSNK1D-204ENST00000398519 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.17■■□□□ 1.3
CSNK1D-204ENST00000398519 DDX54Q8TDD1 881 aaKnown RBP23.16■■□□□ 1.3
CSNK1D-204ENST00000398519 SPG7Q9UQ90 795 aa23.16■■□□□ 1.3
CSNK1D-204ENST00000398519 PCDH11XQ9BZA7 1347 aa23.16■■□□□ 1.3
CSNK1D-204ENST00000398519 PCDH11YQ9BZA8 1340 aa23.16■■□□□ 1.3
CSNK1D-204ENST00000398519 FCHSD2O94868 740 aa23.15■■□□□ 1.3
CSNK1D-204ENST00000398519 PRKAR2BP31323 418 aa23.15■■□□□ 1.3
CSNK1D-204ENST00000398519 MRS2Q9HD23 443 aa23.15■■□□□ 1.3
CSNK1D-204ENST00000398519 CYP27B1O15528 508 aa23.14■■□□□ 1.29
CSNK1D-204ENST00000398519 AMOTQ4VCS5 1084 aa23.14■■□□□ 1.29
CSNK1D-204ENST00000398519 PLEKHO1Q53GL0 409 aaPredicted RBP23.14■■□□□ 1.29
CSNK1D-204ENST00000398519 WDR43Q15061 677 aaKnown RBP eCLIP23.13■■□□□ 1.29
CSNK1D-204ENST00000398519 BCL9O00512 1426 aa23.12■■□□□ 1.29
CSNK1D-204ENST00000398519 FAM196AQ6ZSG2 479 aa23.11■■□□□ 1.29
CSNK1D-204ENST00000398519 PHACTR3Q96KR7 559 aa23.1■■□□□ 1.29
CSNK1D-204ENST00000398519 PHKG2P15735 406 aa23.1■■□□□ 1.29
CSNK1D-204ENST00000398519 MTHFSDQ2M296 383 aaKnown RBP23.1■■□□□ 1.29
CSNK1D-204ENST00000398519 ZNF530Q6P9A1 599 aaPredicted RBP23.1■■□□□ 1.29
CSNK1D-204ENST00000398519 PLEKHF1Q96S99 279 aa23.1■■□□□ 1.29
CSNK1D-204ENST00000398519 ADAMTS8Q9UP79 889 aa23.1■■□□□ 1.29
CSNK1D-204ENST00000398519 MIER1Q8N108 512 aa23.09■■□□□ 1.29
CSNK1D-204ENST00000398519 PNISRQ8TF01 805 aaKnown RBP23.09■■□□□ 1.29
CSNK1D-204ENST00000398519 SBF2Q86WG5 1849 aa23.08■■□□□ 1.29
CSNK1D-204ENST00000398519 IFNL2Q8IZJ0 200 aa23.08■■□□□ 1.29
CSNK1D-204ENST00000398519 DOT1LQ8TEK3 1739 aa23.07■■□□□ 1.28
CSNK1D-204ENST00000398519 NKX1-1Q15270 411 aaPredicted RBP23.06■■□□□ 1.28
CSNK1D-204ENST00000398519 TOGARAM1Q9Y4F4 1720 aa23.06■■□□□ 1.28
CSNK1D-204ENST00000398519 CCER2I3L3R5 266 aa23.05■■□□□ 1.28
CSNK1D-204ENST00000398519 C1orf141Q5JVX7 400 aa23.05■■□□□ 1.28
CSNK1D-204ENST00000398519 GAS2L2Q8NHY3 880 aa23.05■■□□□ 1.28
CSNK1D-204ENST00000398519 PNNQ9H307 717 aaKnown RBP23.05■■□□□ 1.28
CSNK1D-204ENST00000398519 NHSQ6T4R5 1651 aa23.05■■□□□ 1.28
CSNK1D-204ENST00000398519 AKAP4Q5JQC9 854 aa23.03■■□□□ 1.28
CSNK1D-204ENST00000398519 CCDC146Q8IYE0 955 aa23.03■■□□□ 1.28
CSNK1D-204ENST00000398519 ACSBG1Q96GR2 724 aa23.03■■□□□ 1.28
CSNK1D-204ENST00000398519 KDM6AO15550 1401 aaPredicted RBP23.03■■□□□ 1.28
CSNK1D-204ENST00000398519 TNS1Q9HBL0 1735 aaKnown RBP23.02■■□□□ 1.28
CSNK1D-204ENST00000398519 TRIM37O94972 964 aa23.02■■□□□ 1.28
CSNK1D-204ENST00000398519 MAPK8IP3Q9UPT6 1336 aa23.02■■□□□ 1.28
CSNK1D-204ENST00000398519 NEFMP07197 916 aa23.01■■□□□ 1.27
CSNK1D-204ENST00000398519 PTF1AQ7RTS3 328 aa23.01■■□□□ 1.27
CSNK1D-204ENST00000398519 UPF1Q92900 1129 aaKnown RBP eCLIP23.01■■□□□ 1.272e-7■■■■■ 66
CSNK1D-204ENST00000398519 MAP3K5Q99683 1374 aa23.01■■□□□ 1.27
CSNK1D-204ENST00000398519 KCNQ2O43526 872 aa23.01■■□□□ 1.27
CSNK1D-204ENST00000398519 HSP90AB1P08238 724 aaKnown RBP23.01■■□□□ 1.27
CSNK1D-204ENST00000398519 RUNDC1Q96C34 613 aa23■■□□□ 1.27
CSNK1D-204ENST00000398519 DCAF5Q96JK2 942 aa23■■□□□ 1.27
CSNK1D-204ENST00000398519 ADAMTS7Q9UKP4 1686 aa23■■□□□ 1.27
CSNK1D-204ENST00000398519 MPRIPQ6WCQ1 1025 aa22.99■■□□□ 1.27
CSNK1D-204ENST00000398519 SCN11AQ9UI33 1791 aa22.99■■□□□ 1.27
CSNK1D-204ENST00000398519 PRIM1P49642 420 aaKnown RBP22.98■■□□□ 1.27
CSNK1D-204ENST00000398519 BCL11BQ9C0K0 894 aaPredicted RBP22.98■■□□□ 1.27
CSNK1D-204ENST00000398519 GNAT3A8MTJ3 354 aa22.97■■□□□ 1.27
CSNK1D-204ENST00000398519 NFE2L2Q16236 605 aa22.97■■□□□ 1.27
CSNK1D-204ENST00000398519 ITGB4P16144 1822 aa22.97■■□□□ 1.27
CSNK1D-204ENST00000398519 VIRMAQ69YN4 1812 aaKnown RBP22.97■■□□□ 1.27
CSNK1D-204ENST00000398519 DLG5Q8TDM6 1919 aa22.97■■□□□ 1.27
CSNK1D-204ENST00000398519 FAM9BQ8IZU0 186 aa22.97■■□□□ 1.27
CSNK1D-204ENST00000398519 SYTL4Q96C24 671 aaPredicted RBP22.97■■□□□ 1.27
CSNK1D-204ENST00000398519 CCDC125Q86Z20 511 aa22.96■■□□□ 1.27
CSNK1D-204ENST00000398519 LGR6Q9HBX8 967 aa22.96■■□□□ 1.27
CSNK1D-204ENST00000398519 BTAF1O14981 1849 aa22.96■■□□□ 1.27
CSNK1D-204ENST00000398519 SOCS7O14512 581 aa22.95■■□□□ 1.26
CSNK1D-204ENST00000398519 KAT6BQ8WYB5 2073 aa22.95■■□□□ 1.26
CSNK1D-204ENST00000398519 RNMTO43148 476 aaKnown RBP22.94■■□□□ 1.26
CSNK1D-204ENST00000398519 MRC1P22897 1456 aa22.94■■□□□ 1.26
CSNK1D-204ENST00000398519 ERVV-2B6SEH9 535 aa22.93■■□□□ 1.26
CSNK1D-204ENST00000398519 TMPOP42166 694 aaKnown RBP22.93■■□□□ 1.26
CSNK1D-204ENST00000398519 IL17REQ8NFR9 667 aa22.93■■□□□ 1.26
CSNK1D-204ENST00000398519 RRP7AQ9Y3A4 280 aaKnown RBP22.93■■□□□ 1.26
CSNK1D-204ENST00000398519 APBA3O96018 575 aa22.92■■□□□ 1.26
CSNK1D-204ENST00000398519 SF3B2Q13435 895 aaKnown RBP22.92■■□□□ 1.26
CSNK1D-204ENST00000398519 CEMIPQ8WUJ3 1361 aa22.92■■□□□ 1.26
CSNK1D-204ENST00000398519 PIGBQ92521 554 aa22.91■■□□□ 1.26
CSNK1D-204ENST00000398519 TMOD3Q9NYL9 352 aa22.91■■□□□ 1.26
CSNK1D-204ENST00000398519 APAF1O14727 1248 aa22.9■■□□□ 1.26
CSNK1D-204ENST00000398519 HTATSF1O43719 755 aaKnown RBP22.9■■□□□ 1.26
CSNK1D-204ENST00000398519 RIPK4P57078 832 aa22.9■■□□□ 1.26
CSNK1D-204ENST00000398519 MCM10Q7L590 875 aa22.9■■□□□ 1.26
CSNK1D-204ENST00000398519 RTF1Q92541 710 aaKnown RBP22.9■■□□□ 1.26
CSNK1D-204ENST00000398519 CABP4P57796 275 aa22.89■■□□□ 1.26
CSNK1D-204ENST00000398519 DCTN1Q14203 1278 aa22.89■■□□□ 1.26
CSNK1D-204ENST00000398519 NEUROD2Q15784 382 aa22.89■■□□□ 1.25
CSNK1D-204ENST00000398519 DEFB132Q7Z7B7 95 aa22.89■■□□□ 1.25
CSNK1D-204ENST00000398519 NFATC2IPQ8NCF5 419 aa22.89■■□□□ 1.25
CSNK1D-204ENST00000398519 SLC52A2Q9HAB3 445 aa22.89■■□□□ 1.25
CSNK1D-204ENST00000398519 RGPD3A6NKT7 1758 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms