RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 SENP3Q9H4L4 574 aaPredicted RBP21.28■■□□□ 1
EWSR1-206ENST00000397938 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.27■■□□□ 1
EWSR1-206ENST00000397938 ATP7BP35670 1465 aa21.27■■□□□ 1
EWSR1-206ENST00000397938 TMEM131LA2VDJ0 1609 aa21.27■■□□□ 1
EWSR1-206ENST00000397938 IL13P35225 146 aa21.27■■□□□ 1
EWSR1-206ENST00000397938 CDK12Q9NYV4 1490 aaPredicted RBP21.26■□□□□ 0.99
EWSR1-206ENST00000397938 MCM5P33992 734 aa21.26■□□□□ 0.99
EWSR1-206ENST00000397938 XPCQ01831 940 aaPredicted RBP21.26■□□□□ 0.99
EWSR1-206ENST00000397938 MAP7D2Q96T17 732 aa21.26■□□□□ 0.99
EWSR1-206ENST00000397938 TMEM63CQ9P1W3 806 aa21.26■□□□□ 0.99
EWSR1-206ENST00000397938 RBM10P98175 930 aaKnown RBP21.26■□□□□ 0.99
EWSR1-206ENST00000397938 REC8O95072 547 aa21.25■□□□□ 0.99
EWSR1-206ENST00000397938 RPAP2Q8IXW5 612 aaPredicted RBP21.25■□□□□ 0.99
EWSR1-206ENST00000397938 SLC52A1Q9NWF4 448 aa21.25■□□□□ 0.99
EWSR1-206ENST00000397938 RGS12O14924 1447 aa21.25■□□□□ 0.99
EWSR1-206ENST00000397938 CEP85Q6P2H3 762 aa21.24■□□□□ 0.99
EWSR1-206ENST00000397938 CPSF1Q10570 1443 aaKnown RBP21.24■□□□□ 0.99
EWSR1-206ENST00000397938 CSPP1Q1MSJ5 1256 aa21.24■□□□□ 0.99
EWSR1-206ENST00000397938 EMILIN1Q9Y6C2 1016 aa21.24■□□□□ 0.99
EWSR1-206ENST00000397938 SYCE3A1L190 88 aa21.23■□□□□ 0.99
EWSR1-206ENST00000397938 CCDC39Q9UFE4 941 aa21.23■□□□□ 0.99
EWSR1-206ENST00000397938 UQCRHLA0A096LP55 91 aa21.22■□□□□ 0.99
EWSR1-206ENST00000397938 UQCRHP07919 91 aa21.22■□□□□ 0.99
EWSR1-206ENST00000397938 ALKQ9UM73 1620 aa21.22■□□□□ 0.99
EWSR1-206ENST00000397938 NSFL1CQ9UNZ2 370 aaKnown RBP21.22■□□□□ 0.99
EWSR1-206ENST00000397938 MBD3O95983 291 aa21.22■□□□□ 0.99
EWSR1-206ENST00000397938 ERC2O15083 957 aa21.21■□□□□ 0.99
EWSR1-206ENST00000397938 SMARCA5O60264 1052 aaPredicted RBP21.21■□□□□ 0.99
EWSR1-206ENST00000397938 CHAMP1Q96JM3 812 aa21.21■□□□□ 0.99
EWSR1-206ENST00000397938 FAM13BQ9NYF5 915 aa21.21■□□□□ 0.99
EWSR1-206ENST00000397938 RTL1A6NKG5 1358 aa21.21■□□□□ 0.99
EWSR1-206ENST00000397938 DIP2CQ9Y2E4 1556 aa21.21■□□□□ 0.99
EWSR1-206ENST00000397938 FAM83GA6ND36 823 aa21.21■□□□□ 0.99
EWSR1-206ENST00000397938 PREX1Q8TCU6 1659 aa21.2■□□□□ 0.98
EWSR1-206ENST00000397938 MSH6P52701 1360 aa21.2■□□□□ 0.98
EWSR1-206ENST00000397938 AATKQ6ZMQ8 1374 aa21.18■□□□□ 0.98
EWSR1-206ENST00000397938 DYNC1I1O14576 645 aa21.18■□□□□ 0.98
EWSR1-206ENST00000397938 DCTN1Q14203 1278 aa21.17■□□□□ 0.98
EWSR1-206ENST00000397938 EDC4Q6P2E9 1401 aaKnown RBP21.17■□□□□ 0.98
EWSR1-206ENST00000397938 APBB1O00213 710 aa21.17■□□□□ 0.98
EWSR1-206ENST00000397938 TMX3Q96JJ7 454 aa21.17■□□□□ 0.98
EWSR1-206ENST00000397938 BRD1O95696 1058 aa21.16■□□□□ 0.98
EWSR1-206ENST00000397938 HAP1P54257 671 aaPredicted RBP21.16■□□□□ 0.98
EWSR1-206ENST00000397938 SASS6Q6UVJ0 657 aa21.16■□□□□ 0.98
EWSR1-206ENST00000397938 DLC1Q96QB1 1528 aa21.16■□□□□ 0.98
EWSR1-206ENST00000397938 MCM2P49736 904 aa21.15■□□□□ 0.98
EWSR1-206ENST00000397938 MEIS3Q99687 375 aa21.15■□□□□ 0.98
EWSR1-206ENST00000397938 OSBPL3Q9H4L5 887 aa21.15■□□□□ 0.98
EWSR1-206ENST00000397938 FOXD4L5Q5VV16 416 aaPredicted RBP21.15■□□□□ 0.98
EWSR1-206ENST00000397938 MTERF4Q7Z6M4 381 aaKnown RBP21.15■□□□□ 0.98
EWSR1-206ENST00000397938 FOXD4L4Q8WXT5 416 aaPredicted RBP21.15■□□□□ 0.98
EWSR1-206ENST00000397938 NEK4P51957 841 aa21.14■□□□□ 0.98
EWSR1-206ENST00000397938 PTPRCP08575 1304 aa21.14■□□□□ 0.97
EWSR1-206ENST00000397938 CUL4AQ13619 759 aa21.14■□□□□ 0.97
EWSR1-206ENST00000397938 RNF214Q8ND24 703 aa21.14■□□□□ 0.97
EWSR1-206ENST00000397938 NME9Q86XW9 330 aa21.13■□□□□ 0.97
EWSR1-206ENST00000397938 TSPY26PQ9H489 355 aa21.13■□□□□ 0.97
EWSR1-206ENST00000397938 KRT24Q2M2I5 525 aa21.12■□□□□ 0.97
EWSR1-206ENST00000397938 TUBGCP6Q96RT7 1819 aa21.12■□□□□ 0.97
EWSR1-206ENST00000397938 PDE1AP54750 535 aa21.12■□□□□ 0.97
EWSR1-206ENST00000397938 KIAA0232Q92628 1395 aa21.12■□□□□ 0.97
EWSR1-206ENST00000397938 HMMRO75330 724 aa21.11■□□□□ 0.97
EWSR1-206ENST00000397938 SYAP1Q96A49 352 aaPredicted RBP21.11■□□□□ 0.97
EWSR1-206ENST00000397938 ZRANB1Q9UGI0 708 aa21.11■□□□□ 0.97
EWSR1-206ENST00000397938 INTS4Q96HW7 963 aaKnown RBP21.1■□□□□ 0.97
EWSR1-206ENST00000397938 NRKQ7Z2Y5 1582 aa21.1■□□□□ 0.97
EWSR1-206ENST00000397938 RAPGEF3O95398 923 aa21.1■□□□□ 0.97
EWSR1-206ENST00000397938 CHL1O00533 1208 aa21.09■□□□□ 0.97
EWSR1-206ENST00000397938 KIAA2012Q0VF49 1180 aa21.09■□□□□ 0.97
EWSR1-206ENST00000397938 RIMBP3CA6NJZ7 1639 aa21.09■□□□□ 0.97
EWSR1-206ENST00000397938 RIMBP3BA6NNM3 1639 aa21.09■□□□□ 0.97
EWSR1-206ENST00000397938 RIMBP3Q9UFD9 1639 aa21.09■□□□□ 0.97
EWSR1-206ENST00000397938 WAPLQ7Z5K2 1190 aa21.09■□□□□ 0.97
EWSR1-206ENST00000397938 ESYT1Q9BSJ8 1104 aa21.09■□□□□ 0.97
EWSR1-206ENST00000397938 PTMAP06454 111 aaKnown RBP21.08■□□□□ 0.97
EWSR1-206ENST00000397938 RRS1Q15050 365 aaKnown RBP21.08■□□□□ 0.97
EWSR1-206ENST00000397938 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.08■□□□□ 0.979e-7■■□□□ 12.4
EWSR1-206ENST00000397938 NEO1Q92859 1461 aa21.08■□□□□ 0.96
EWSR1-206ENST00000397938 MON2Q7Z3U7 1717 aa21.08■□□□□ 0.96
EWSR1-206ENST00000397938 MCCP23508 829 aa21.07■□□□□ 0.96
EWSR1-206ENST00000397938 ANAPC15P60006 121 aa21.07■□□□□ 0.96
EWSR1-206ENST00000397938 PRDM4Q9UKN5 801 aa21.07■□□□□ 0.96
EWSR1-206ENST00000397938 COG3Q96JB2 828 aa21.07■□□□□ 0.96
EWSR1-206ENST00000397938 SALL3Q9BXA9 1300 aa21.07■□□□□ 0.96
EWSR1-206ENST00000397938 CPS1P31327 1500 aa21.06■□□□□ 0.96
EWSR1-206ENST00000397938 PHF14O94880 888 aa21.06■□□□□ 0.96
EWSR1-206ENST00000397938 PALD1Q9ULE6 856 aa21.06■□□□□ 0.96
EWSR1-206ENST00000397938 SETD1AO15047 1707 aaKnown RBP21.06■□□□□ 0.96
EWSR1-206ENST00000397938 NPM1P06748 294 aaKnown RBP eCLIP21.06■□□□□ 0.96
EWSR1-206ENST00000397938 SSH2Q76I76 1423 aa21.05■□□□□ 0.96
EWSR1-206ENST00000397938 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.04■□□□□ 0.964e-6■■■□□ 14.7
EWSR1-206ENST00000397938 AEBP1Q8IUX7 1158 aa21.04■□□□□ 0.96
EWSR1-206ENST00000397938 IL17RAQ96F46 866 aa21.04■□□□□ 0.96
EWSR1-206ENST00000397938 RICTORQ6R327 1708 aa21.04■□□□□ 0.96
EWSR1-206ENST00000397938 C3P01024 1663 aa21.03■□□□□ 0.96
EWSR1-206ENST00000397938 FAM184AQ8NB25 1140 aa21.03■□□□□ 0.96
EWSR1-206ENST00000397938 GADD45BO75293 160 aaPredicted RBP21.02■□□□□ 0.96
EWSR1-206ENST00000397938 UVSSAQ2YD98 709 aa21.02■□□□□ 0.96
EWSR1-206ENST00000397938 MCM10Q7L590 875 aa21.02■□□□□ 0.96
EWSR1-206ENST00000397938 SMAP1Q8IYB5 467 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms